Hippoglossus stenolepis (Pacific halibut): 118105936
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Entry
118105936 CDS
T08308
Name
(RefSeq) claudin-3
KO
K06087
claudin
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp03272
Virion - Hepatitis viruses
hsp04382
Cornified envelope formation
hsp04514
Cell adhesion molecule (CAM) interaction
hsp04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
118105936
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
118105936
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
118105936
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
118105936
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
hsp03037
]
118105936
04147 Exosome [BR:
hsp04147
]
118105936
Cilium and associated proteins [BR:
hsp03037
]
Other cilia and associated proteins
Stereociliary proteins
118105936
Exosome [BR:
hsp04147
]
Exosomal proteins
Exosomal proteins of ovarian cancer cells
118105936
Exosomal proteins of colorectal cancer cells
118105936
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PMP22_Claudin
Claudin_2
Motif
Other DBs
NCBI-GeneID:
118105936
NCBI-ProteinID:
XP_035009882
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All DBs
Position
4:complement(3243639..3247557)
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AA seq
413 aa
AA seq
DB search
MVSQGIQMIGIAMAVIGWFMVVVVCALPMWKVTAFVGANIITAQTIWQGMWMNCVVQSTG
QMQCKMYDSMLALPQDLQAARAMTIISILTGVFGVVVAIAGGKCTNCMEDERSKAKACIL
AGVLFIVSGLLCLIPVSWSANTIVRNFYNPMMIEAQRYDLFTMGRIGKEVAGQIISFIGL
VGVSVSCGVPMWRVTSYIGANIVTGQVVWDGLWMNCVMQSTGQMQCKLNESVMRLSPDLQ
AARALVIISLLCGFIGFIVSFIGASCTGCLKKEASQANVVIISGCLIIMAAVLILIPVCW
SATITITDFQNPLTLQTQKREIGASIYIGWASAAVLLIGGIILTTSCPPQKPMYGYPGYP
PAPGYPYSGPGPNPSMYAPVYAPASSRPYTGTGSYAPTKPYAAPPTYAPRQYL
NT seq
1242 nt
NT seq
+upstream
nt +downstream
nt
atggtttcccaggggattcagatgatcggcatagcgatggccgtgatcggctggttcatg
gtcgtggtggtgtgcgccctgcccatgtggaaggtcaccgctttcgtcggcgccaacatc
atcacggctcagaccatctggcagggcatgtggatgaactgcgtggtgcagagcacgggc
cagatgcagtgcaagatgtacgactccatgctggctctgccccaggacctgcaggccgcc
cgcgccatgaccatcatctccatcctgacgggggtcttcggagtggtcgtggccatcgct
ggtgggaagtgcaccaactgcatggaggacgagcggtccaaggcgaaggcctgcatcctg
gctggagttctgttcatcgtctcggggttgctctgcctcattcccgtgtcctggtcggcc
aacaccatcgtcagaaacttctacaacccgatgatgatcgaggcccagaggtacgacctc
ttcaccatggggaggattggcaaggaagtggcaggtcagatcattagcttcattggcctg
gtcggggtgtcggtgagctgtggcgtccccatgtggagggtgacctcttacatcggagcc
aacatcgtgacgggccaggtcgtgtgggacggcctgtggatgaactgcgtgatgcagagc
acgggacagatgcagtgcaagctgaacgagtctgtgatgaggctgtccccggatctgcaa
gccgcccgagctctggtcatcatctccctcctctgcggcttcatcggcttcatagtcagc
ttcatcggagccagttgcaccggctgcctgaagaaagaggcctcccaggccaacgtggtg
atcataagcggctgcctcatcatcatggccgccgtcctgatcctcatccccgtctgctgg
tctgccaccatcaccatcacagactttcagaaccccttgaccctccagacgcagaagagg
gaaatcggagcgtccatctacatcggctgggcctcggcggccgtcctcctgatcggcggg
atcatcctgaccacctcgtgtcctcctcagaagcccatgtatggatacccaggataccca
ccagcaccagggtacccgtactcaggcccagggccgaacccatccatgtacgcccctgtg
tacgcgcccgcatccagccgaccatacacaggaacggggtcgtatgcacccaccaagccg
tacgctgcaccccccacatacgctcctagacagtacctctag
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