Hippoglossus stenolepis (Pacific halibut): 118105947
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Entry
118105947 CDS
T08308
Symbol
rsf1a
Name
(RefSeq) remodeling and spacing factor 1
KO
K11657
remodeling and spacing factor 1
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
118105947 (rsf1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
hsp03036
]
118105947 (rsf1a)
Chromosome and associated proteins [BR:
hsp03036
]
Eukaryotic type
Chromatin remodeling factors
RSF complex
118105947 (rsf1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PHD
WHIM1
DDT
Motif
Other DBs
NCBI-GeneID:
118105947
NCBI-ProteinID:
XP_035009897
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All DBs
Position
4:complement(2057446..2073164)
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AA seq
1466 aa
AA seq
DB search
MAAPAVVRSSGPALCPSFAEVCSFLERYGATLDLPEMTFPQMERYLRDTTAVPKPLVELH
VKLLRKLGRSVTTDRWEKYLAKVCQELNSTWAWELEQKGYQDMSMECKSSILKYLCECQF
DDNLKFKMAINEEDPEKMRLQPIGRDQQGLMYWLQFDHEQNIRLYTEEQDDLDGSTWQCI
VRTRNDLAEALDLLKAQISPALNQEQDQNQAGSRSNSPTEKGAGDEVIGSTDPEPSKTTE
EPAESKTLDPIKEEKPLIPELKEEQMQSIEGENTDAEVKEKTTDHKPPVFDNRVSTITTI
VKSESRESDAPKNAVSVVMAPGTTVIKQEVNKEEEAGRAVVRSNQQAKIPLKKRELKLAE
SYQSSHLNNSSSSIIVCNPSVIQSKDRREGKLLNSVAPPCGPSMPQQQQLVVSAAKQELT
NGRASVLLPHKDGQNGVIGVIGQVGVIGHIGVIRSPSERHRAPGAEQQEPNGPSVDHWSS
RVVEEEREVSRQSVLVRKGPVEGDTSASAASALPLLVAKEAQTPEKLLMTSSKSDQAPKA
VEREVDAVSISSLSQSTEEPKRQTTEDLCKKATEEPSEKGTESGPSSLHQKDDDVDEREG
RRGEVSGAEEGSKDYNEKSKSTLGKMEAESGGAVPPLKVEQRDENDHLDHQGDGVNDELA
AQVRVKDTGLRSEGKQGPLEEASSELQKEGIRLKIKIPPHRRNKLRKGGKEGEKEREQEA
QDEGRQLRRSTRICRPSSKVAESQRKKPQKKQALASRTREEEEEEEEEEEEEEQSSATKK
DIKAEVAGQIRKRRGKRRHRRPRWSNIRSKRRKLNEGTEVEDRGTKREDEESEGGSDSEE
SCKSEEIPSEDACSHCGLPNHPELILLCDSCDSGYHTACLRPPLMLIPDGEWFCPPCQHK
LLCEKLEEHLLNLDSALKKKDRAERRRERLVYVGISVENIIPEGDGEEEEKSTKKKDPKK
SKNLGRRSTRTRKHISYRFDDFDDAIDEAIEEDITDLCAVGTERSKDITPILSEDRKESQ
RPIRSQAHSVRSRKKRRLNDLESDSTAAESEDEFMLSNSSEDEEFGASGADDDEEEDEDA
GSEVGSWDSATRPKRPLRGVPKQRPSKTQRRGRKRQRRRRRHSSEEEEEETEEEMDSDQY
SDMSDSDADKKRRGLRRGQRQQVNYRETSESSDNSKASASKNKVKPRGRPRKEHLSSDFS
DVSRSSRDSGDEEDYEDEDEDDQRRRVNRRRKEEKDQWRNRMKEKRRRHRDKEDDRERGR
RLKRKLLEKEEDKRRRLKRTDREEEDMEKMGRGKRREILSEQRRRRLAQMLKKRRPSTDD
DDEEESEESESSSEEDRPVRKRLNRIDSDDDDDKKEEEEEEEEEEEEEEEEEGRQKVTTK
KSSAVERRSDSEAQEKGRGRSLSPSNIHRTSRGPVKPGDGSPTVPRDSEASGQQGKLNGP
FLPDQEEEEEEKEEEGEEEEGARQTH
NT seq
4401 nt
NT seq
+upstream
nt +downstream
nt
atggctgctccggcggtggtgaggagctccggcccggcgctgtgcccgagcttcgcggag
gtctgttcgttcctggagcggtacggagcgacgctggatctgcccgagatgactttcccg
cagatggagcggtatctgcgggacacgacggcagtccctaaacccctcgtggagcttcac
gtgaagctgctcagaaaacttgggaggtctgtaacgacagaccgctgggagaagtacctg
gctaaggtttgccaggagctgaacagtacttgggcgtgggagctggaacagaagggctac
caggatatgtccatggagtgcaagtcgagcatcctaaaatatctgtgcgagtgtcagttt
gatgacaacctgaagttcaagatggcgattaatgaggaggacccagagaagatgcgtctg
cagccgatcggtcgggaccaacagggcctgatgtactggcttcagttcgaccacgagcag
aacatccggctgtacacggaggagcaggacgatctggacggatccacctggcagtgcatt
gtcaggactcgtaacgatctggctgaagctctggacctgttgaaggctcagatcagtcca
gccctgaatcaggagcaggaccagaaccaggctggatccaggagcaacagccccacagag
aaaggtgcaggggatgaggtaataggaagcactgacccagaaccctccaagaccacagag
gaacccgccgagagcaagacgcttgaccccataaaggaagagaaacccctcataccagag
ctaaaggaggagcagatgcagtcaatagagggggagaacacagacgctgaggtaaaagaa
aagacgacggaccacaaaccccctgtgttcgataatcgggtcagcaccatcaccaccatt
gtcaaatctgaatccagggaatccgacgcccccaaaaacgctgtgtcggttgtaatggca
ccaggcacgactgtgataaaacaggaagttaacaaggaagaggaggctgggcgggccgtt
gtcaggagcaaccagcaggcaaagataccactgaagaagagggagctgaagctcgcagag
agctaccagagcagccaccttaacaacagcagcagcagtattattgtttgtaacccctca
gtgatccagagcaaggacagaagagaggggaagttacttaactcagtagcacccccttgt
ggtccctctatgccacaacagcagcagttagtggtcagtgcagcgaagcaagaactgacg
aatgggagagcgtctgtgctcctgcctcacaaagacggacagaatggagtcataggggtc
ataggtcaagtcggtgtaataggtcatataggggtcatccgcagtccgtccgagcgtcac
agagcccctggcgctgagcaacaggaaccaaacgggccaagtgtagaccactggagctcc
agagttgtggaggaagagcgggaggtgagccggcagtcagtgctggtgaggaagggacct
gttgaaggtgacacgtcggcctcagcagcctccgctctccctcttcttgtggcaaaggag
gcgcaaacacccgagaagctgctaatgacatcttcaaagtctgatcaagcccctaaagct
gtagagagagaagtggatgctgttagcatttcttcactgtctcagtccacagaggaaccc
aagagacagacgacagaagacctgtgcaaaaaagcaacagaggaaccatcggagaagggg
acagaaagtgggcccagcagtcttcaccagaaagatgatgacgtggacgagagggagggg
aggagaggagaagtgtctggggcagaggaaggaagtaaggattacaatgaaaagagtaag
agcactttggggaagatggaggcagaatcagggggcgccgttcctcctctaaaagttgaa
cagagagatgaaaatgaccacctggaccaccagggagatggggtcaatgatgagctggct
gcccaggtcagggttaaggacactgggctgcggtcagaggggaagcagggtcccctggag
gaggcatcctccgaactccagaaagaaggaatcaggctgaagattaagattcctcctcac
aggagaaacaagttaaggaaaggtggaaaagagggggagaaagagagggagcaggaggcc
caagacgaagggaggcagctgaggagatcaaccaggatttgcaggccgagctcgaaggtg
gcggagagccagaggaagaaaccacaaaaaaaacaggcactggcctccagaacaagggaa
gaagaggaggaggaggaggaagaagaggaagaagaggagcagagctcagctacaaagaaa
gacataaaagcagaagtggctgggcaaattagaaaacgaaggggcaaacggaggcatcgc
cgcccccgatggtccaacatccgttcgaagagacgtaagctgaatgaggggacggaggtg
gaggacagagggacgaaacgagaagatgaggagagcgagggagggagcgactcagaagaa
tcttgtaaatcagaggagattcccagtgaggatgcctgtagtcactgtggcctgcccaac
catcctgaactgatcctgctgtgtgactcttgtgacagtggataccacaccgcctgtctg
cgtccaccgctcatgttgattccagatggagagtggttctgtccgccctgtcaacataaa
ctgttgtgtgagaaactggaggagcatctgctgaatctggacagtgccctgaagaaaaaa
gacagagcagagaggaggagagagcgtctggtgtatgtgggaatcagtgtggagaacatc
attcctgaaggagacggggaggaggaagagaagtccacaaagaagaaagaccccaaaaag
agtaaaaatctgggccgaagatcgacaagaaccaggaaacacatcagctacaggtttgac
gactttgacgatgcgatcgatgaggctatcgaggaagacatcactgacctctgtgccgta
ggaaccgagcgcagcaaagacatcactcccatcctgtcagaggacaggaaggagagccag
cggccaatcagaagccaagctcattctgtcaggagcaggaagaagaggaggctgaacgac
ctggagagcgacagcacggcagcagagagtgaggatgagttcatgctcagcaacagctct
gaggatgaagaattcggtgcatcgggggcagatgacgatgaggaggaagatgaagatgcc
ggcagcgaggtgggcagctgggacagtgcgacccgccccaagcggccgttgagaggggtg
cccaaacaacgacccagcaagacccagcgcagggggaggaaacgacagaggcggcggcgg
agacactcctccgaggaagaggaggaagaaactgaagaagaaatggactccgatcagtac
agtgacatgtccgacagtgatgctgataaaaagaggcggggcctgaggcgcggccagcgg
cagcaggtcaactaccgcgagacgtccgagtcgtcggacaactccaaggcctccgccagc
aagaacaaggtcaaaccccgcgggcggccgcgcaaggagcatctctccagcgacttcagc
gatgtgtcgcgttcttccagagactccggggacgaggaggattatgaagacgaagacgaa
gatgaccagagacggagggtgaacaggaggagaaaggaggagaaagaccagtggaggaac
aggatgaaggaaaagcggaggagacaccgagacaaggaagacgacagagagagagggagg
cggctgaaaaggaaactgctggagaaggaggaggacaagcggaggagattaaagaggaca
gacagagaagaggaggacatggagaagatgggcagaggaaagaggagagagattctgtca
gagcagcggcgccggcgactcgctcagatgctgaagaaacgacggccttcgacggacgat
gacgacgaggaggagtctgaggagtctgagtcgtcatcggaagaggatcgtcccgtccgc
aaaagactcaaccgcatcgactcggatgatgatgatgataagaaggaggaggaggaggaa
gaggaagaagaagaagaagaggaagaggaagaggaggggagacagaaggtgacgaccaaa
aagtcttcagcagtcgagaggaggtcggacagcgaagctcaggaaaaggggaggggccgt
agcttgtctccgtcaaacatacatcggacctccagaggcccagtgaagcccggggatgga
agtcccacagtacccagggacagtgaagcttcaggccagcagggcaagctcaacggcccc
ttccttccagaccaggaggaggaggaggaagaaaaggaggaggagggggaggaggaggag
ggggccagacagactcattaa
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