Hippoglossus stenolepis (Pacific halibut): 118106004
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Entry
118106004 CDS
T08308
Symbol
rffl
Name
(RefSeq) E3 ubiquitin-protein ligase rififylin
KO
K20804
E3 ubiquitin-protein ligase RNF34 [EC:
2.3.2.31
]
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
hsp04121
]
118106004 (rffl)
Enzymes [BR:
hsp01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
118106004 (rffl)
Ubiquitin system [BR:
hsp04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
118106004 (rffl)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNF34L-like_3rd
SAP_RNF34_RFFL
FYVE_CARP1-2
zf-C3HC4_3
ARMET_C
Phage_lysis
Motif
Other DBs
NCBI-GeneID:
118106004
NCBI-ProteinID:
XP_035010008
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All DBs
Position
4:complement(596307..603909)
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AA seq
335 aa
AA seq
DB search
MWASCCNWLCMDSADVEQSGEDERRHQSYTNSAFNSQPSPPPPEHICKACGGTFDTPTKK
HVCVDCKKNYCSRCSAQLEPRPRLCHTCQRFYGNLLERAELMKLKVKELRDYLHLHEVST
HLCREKEELVELVLSQHSSPSSEQAPETLTPDPPSVTPDPPTPTPTPTPNLTSDPPQPES
PSPPTETTASEPDIQEEGQTWDPEEPSVSGRRASLSDLSCEDDIEVLSVRQLKEILARNF
VDYKGCCEKWELMERVSRLYQDQQNLVASAVSASESGGGSASPEDNLCKICMDCPIDCVL
LECGHMITCTKCGKRMSECPICRQYVVRAVHVFRS
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atgtgggcgtcttgctgtaattggctgtgtatggactcagctgatgtagaacagtcgggt
gaagatgaacgtcggcatcagtcctacaccaactctgccttcaactctcagccgtctccc
cccccacctgaacacatctgtaaggcctgcggggggacctttgacacacctaccaagaag
catgtgtgtgtggactgtaagaagaactactgcagccgttgctccgcccagcttgagccg
cggccccgcctctgtcacacctgtcagcgtttctatggcaacctgctggagcgggcggag
cttatgaagctcaaggtgaaggagctcagagactatctgcacctgcatgaggtgtcaaca
cacctgtgcagagagaaggaggagctggtagaactggtcctgagtcagcattcgtcacct
tccagcgaacaggcccccgagacactgaccccagaccctccctctgtgacgcctgaccca
cctacacctacacctacacccacccccaacctcacctctgatcctccacagcccgaatcc
ccgtcccctcccacagagaccactgcctctgagcctgacattcaggaagaaggccagacc
tgggaccctgaggagccatcagtttcaggccgtagggcttctctgtccgacctgagttgc
gaggacgacattgaggtgctcagcgtgcggcagctgaaagaaattctcgctaggaacttt
gtggactataaaggctgctgtgagaaatgggagctgatggagcgagtgagtcgactgtac
caggaccagcagaacctcgttgccagtgcagtgagcgcctcagagtccggcggcggttct
gcaagtccggaggataacctctgtaagatctgtatggactgtcccatcgactgcgtcctg
ctggagtgtggtcacatgatcacctgcaccaagtgcggcaagaggatgagcgagtgtcct
atctgccgccaatatgttgtccgagccgtccacgtcttcaggtcctga
DBGET
integrated database retrieval system
