Hippoglossus stenolepis (Pacific halibut): 118106048
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Entry
118106048 CDS
T08308
Name
(RefSeq) latent-transforming growth factor beta-binding protein 4
KO
K08023
latent transforming growth factor beta binding protein 2/3/4
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
hsp04990
]
118106048
Domain-containing proteins not elsewhere classified [BR:
hsp04990
]
EGF-like domain-containing proteins
hEGF / cEGF domain-containing proteins
118106048
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_CA
cEGF
TB
FXa_inhibition
EGF
EGF_3
hEGF
Plasmod_Pvs28
EGF_2
EGF_Teneurin
Motif
Other DBs
NCBI-GeneID:
118106048
NCBI-ProteinID:
XP_047195558
LinkDB
All DBs
Position
4:899325..923587
Genome browser
AA seq
1773 aa
AA seq
DB search
MLQPSLCCFLSVIVFFFFVSPPLADGQTVTAGGGGGGRVERIQVMFTPTICKVRCNQDRC
VNYCERGNVTTLYSSNTEGGGEGGRRDGSHGPGFRVFLCPLLCKNGGVCLQKDRCLCPSN
FVGKFCQIPVASTSAAAAAAASPSSTNEIVKPALLSATTANQELTQSEFLVPLGQNQEAA
RAGAPALSMVKVRVQHPPEASVKIHQVLKVSGFSPTLRTLSSPSSGSAGAPAPPGVGVQA
QTVRGDGTYTEHSGFRYCFREVKDGQCSSPLPGLRSRDMCCRGIGKGWGITDCVLCPDTG
QSNSSCPSGFERSNGTQCVDVNECLQPGLCENGICVNTRGSYSCVCRVGFILDATHGICI
SQSVISEEKGQCFRVLGSGQGPSSCSLPILRNITKQICCCSRVGKAWGHDCQRCPYFGSV
AFKEICPAGPGYHYSASVLQFNQRVNEQLGGRGATLVTHSNQDTQAPDSGSSSGGASRQK
PSGGESTSLSSGSAGTSGTQTRPVPPPTPRHPSQPQTRPATSSPSTRTVQSSSTGTSTPR
DKPQTPGRAGTQQVRPGFAPSHPRPQPPSTGSHAGGRSSSVSRPDHTQARGDSLPAPAQP
QNPERGSRPHEELPPLENRPAVSPTTRPSRVQTVRGVCETRPGVCGRGLCVDQPSGKHTC
VCDQGYQPNTQRTYCQDVNECVQSPGVCLVGECVNTMGSYRCVCPSGYRSSGEQTSCQDM
DECQLNPCRNGRCDNTPGSYRCVCRLGYRLTGNTCTDVDECADPLQCPGQECINSQGSYR
CASCQPGYGLINQLCTDIDECRRTPCSNARCENTPGSYRCVCRHGYKLQNNTCTDIDECV
EPSQCPGQMCVNSVGSYRCVSCRPGYTLTNRQCTDVNECENSESCPGQQCVNTEGSYSCM
DCQQGYHSVNRVCTDVDECVQASQCPGQQCVNTVGSYHCVSCQPGYSGEDGSCQDVDECA
SAGGCGAERVCVNTVGSFRCDCLPGYRTSGLGRQCRDINECLEGEFCFSRGECVNTPGSY
TCVCSQGFTLSDNGTSCLDVDECAKSGVCVGRRCVNTEGSFYCQCQPGFTTNPEGTTCLD
VDECVTSGGSVCGSQRCENTIGSYHCLTSCEPGYQVHQGRCVDINECANKTACGDHAFCQ
NLIGTHLCSCHQGFTSTADGQSCVDEDECVSLAGVCGSARCENVEGSFMCECDHGEFDMT
MRKCVSTVRPAEIVPSYPSSSSSSSSSFFPSSSSHVSAVELDPVPPPLPAARPGELRECY
YNLAERGTCSLLATNTSQQECCCTVGEGWGLGCQYHPCPPADTADFLSLCPSGRGYVTTG
PGAFSYRDVDECKRFHPEVCKNGVCVNNIPGYNCYCSSGYVYNSTLLECADHDECEEESC
VGGVCVNTVGSYYCSCPPPLVLDDTQRNCVNSSHLTVDENLSVCWQQVSADLMCQSPLLG
AQVTFTDCCCLYGQGWGMECALCPSTDSDDNAFLCSSFLPPHFPSFPGSSGSETGVRRGV
GQGGASAPHFPPYAPESFPPAVVPGRDFSRPDYDDYSPAGGSRPGFRTPASFSLPDTAYR
RPEYGTGFYSEGDYTSPDGPPPRPPSFRLLPDPRAETAFGARPPPPSQPDGPPLSLAPLP
GGHYPDQEEEEEEEETWRPGPPFPPFTEQRGGGGGGDRVRGGGGGGGGALRRVYERRYES
YAGLSAAEDCGILHGCENGRCIRVAEGYTCDCYQGYELDMTSMTCIDVNECEDGVSVEFP
CVNARCVNTSGSFRCVCRRGYVMSRRPNHCVAA
NT seq
5322 nt
NT seq
+upstream
nt +downstream
nt
atgctgcagccttcgctctgctgctttctgtccgtcatcgtcttcttcttcttcgtgtct
cctccgctagctgatggacagaccgtcacagcaggaggagggggaggaggacgggtggag
aggatccaggtgatgttcacgccgacgatctgcaaagtgcgctgcaaccaggaccgatgt
gtcaactactgcgagagaggcaacgtgaccacgctgtacagcagcaacactgagggagga
ggagagggaggacggagagacggctcccatggtccaggcttcagagtcttcctctgtcct
ctgctctgtaagaacggcggcgtctgtcttcagaaggaccgctgcctctgcccctcgaac
ttcgtcggaaagttctgccagatccctgtcgcctccacctccgccgccgcggctgctgca
gcctcgccgtcctccaccaatgagatcgtcaagcctgcgctcctctctgccaccacagcc
aatcaggagctgacccagtcggagttccttgttccgctgggacagaaccaggaagcagcg
agggccggagctccggctctgtccatggtgaaggtcagagtgcagcatccccctgaggcc
agtgtgaagatccaccaggtgctgaaggtgtctgggttcagccccaccctgcggacgctc
tcctcgccctcctcgggctcggcgggggctccggctcctcccggtgtgggcgttcaggct
cagacggtgcgaggcgacggcacgtacaccgagcactccggcttcagatactgcttcaga
gaggtgaaggacggacagtgcagctctcctctgcctggactgaggagcagggacatgtgc
tgccgagggatcgggaaggggtggggcatcaccgactgtgtcctctgtcctgatacaggt
caaagcaacagcagctgtccgtctggttttgagcgatccaatggaacgcagtgtgtcgat
gtgaatgagtgcctccagcctgggctgtgtgagaacgggatctgtgtgaacaccaggggg
agctatagctgtgtgtgtagggtggggttcatcctcgacgccacacatggaatctgcatt
tcccagagtgtgatatcggaggagaagggtcagtgtttccgggtcctgggctcgggtcag
ggtccgtcctcctgctccctgcccatcctcaggaacatcaccaaacagatctgctgctgc
agccgagtcggcaaagcctggggtcacgactgccagagatgtccctactttggttcagtg
gcctttaaggagatctgtccagccggtcctggttatcactactcagcttcagtccttcag
ttcaaccagagagtcaacgagcagctggggggccgaggggccacactggtaacccacagc
aaccaggacacccaggctcctgattctggatccagcagtggtggagcctccaggcagaaa
ccctctggtggagagagtacttcactgagctctggatcagctggtaccagcggcactcag
accagacccgttccacctccgactccccggcatccatctcagcctcagacccgcccggcc
accagctctccctccaccaggacggtacagtccagcagcaccggcacctcgaccccccgg
gacaaaccccagactccaggcagagctgggacccaacaggtccgacctgggtttgctccg
tcacatccaagaccacagcccccgtccactgggagtcacgccggaggtcgttcctcctct
gtgtctcgacccgaccacactcaagcaagaggggactcgctccctgctcctgcccagcca
cagaaccccgagcgtgggtccagaccccacgaagagctgccccctctggagaacaggcca
gctgtcagccccacaaccaggcccagcagagtccagacagtgcgaggtgtgtgtgagacc
aggccgggtgtatgtgggcgtggcctctgtgtggatcagccaagtgggaaacacacttgt
gtgtgtgatcagggataccaacccaacactcagcgcacgtactgccaagatgtgaatgag
tgtgtgcagtctccaggagtgtgtttggtgggagagtgtgtgaacaccatgggaagctac
aggtgtgtgtgtccgtctggataccggagtagtggcgagcagaccagttgtcaagacatg
gacgagtgccagctgaacccctgcaggaacggtcgctgtgacaacacgccgggcagctac
aggtgtgtctgtcgccttggttacaggctcacaggcaacacctgcacagatgtggatgag
tgtgccgaccctctacagtgtcctggtcaggagtgcatcaacagtcagggttcgtatcgc
tgtgcgtcgtgtcagcctggatatggactgatcaaccaactctgcacagacatcgacgag
tgtcgtcggactccctgctccaacgctcgctgtgaaaacacaccggggagctaccgctgt
gtctgtcgccatggttacaagctccagaacaacacctgtacagacatagatgagtgtgtg
gagccatctcagtgtcctggtcagatgtgtgtgaactcggtgggatcataccgctgtgtg
tcctgtcgaccaggttacacactgaccaacagacagtgtacagatgtaaacgagtgtgag
aacagtgagtcttgtcctggtcaacagtgtgtgaacacggagggatcatacagctgtatg
gactgtcagcagggataccacagtgtgaacagagtgtgtacagatgtggacgagtgcgtg
caggcctctcagtgtccgggtcagcagtgtgtgaacacggtgggatcgtaccactgtgtg
tcctgtcagcctgggtacagcggcgaagatggctcctgccaagatgtggatgagtgtgcg
agcgctggggggtgcggggccgagcgagtgtgcgtgaacaccgtcggctcattcaggtgc
gactgtctgcctgggtatcgaacctccggcctggggaggcagtgcagagacattaacgag
tgtctggagggggagttctgtttctccaggggcgagtgtgtgaacacgcctggatcctac
acatgtgtgtgttctcagggattcacgctgagcgacaacgggacgtcctgcctcgatgtg
gatgagtgtgcgaagtcgggcgtgtgtgtgggccgccgctgtgtgaacactgaaggctcc
ttctactgtcagtgtcaacccggcttcaccaccaaccctgaaggcaccacctgcctcgat
gttgacgagtgtgtaacgtccggcgggtcggtctgcggctcgcagcgctgtgaaaacacc
attggttcgtaccactgcctcacttcctgtgagccgggctaccaggtgcaccagggcagg
tgtgtagatattaacgaatgtgccaataagacggcgtgtggggaccacgccttctgtcag
aacctgatcgggacgcacctgtgttcgtgccaccagggcttcacctccaccgcagacgga
caatcctgcgtcgatgaagacgagtgtgtgtctctggccggtgtgtgtggttcggctcgc
tgtgagaacgtggagggatccttcatgtgtgaatgtgaccacggagagtttgacatgacg
atgagaaagtgtgtcagcaccgtacgaccagccgagatcgtccccagctacccctcctcc
tcttcctcctcttcctcctctttcttcccctcctcttcctctcatgtcagtgcggtggag
ttggaccctgtgccgcccccgctgcccgccgcccgtcctggcgagctgagggagtgctac
tacaacctggcggagcgtgggacctgcagcctgctggccaccaacaccagccagcaggag
tgctgctgcacggtgggcgagggctgggggctgggctgccagtaccacccctgccccccc
gccgacacagccgacttcctgtctctgtgtcccagtgggaggggctatgtcaccactgga
ccaggagccttcagctacagagatgtggacgagtgtaaacgtttccaccctgaggtgtgt
aagaacggagtgtgtgtcaacaacatccctggatacaactgctactgctccagtggatat
gtttacaacagcacgctgctggagtgtgcagatcacgatgagtgtgaggaggagagttgt
gttggaggagtgtgtgtgaacacggtgggatcatattactgcagctgcccgccgcctctg
gtgctcgatgacacgcagcgaaactgtgtcaactcctcccacctcactgtggatgagaac
ctgtctgtgtgctggcagcaagtctctgcagacctcatgtgtcagagccccctgctgggc
gctcaggtcaccttcaccgactgctgctgtctgtacgggcagggctgggggatggagtgc
gccctctgtccctccaccgactccgacgacaacgcctttctctgcagttccttccttcct
cctcattttccaagttttcccggttcgagcggatcagaaacaggagtgagacgaggagtc
ggacaaggaggagcaagtgctcctcattttcctccttacgctcctgagtccttccctcca
gctgtggttcctggccgagacttcagtcgtcctgactatgacgattactctccagcaggg
ggcagcaggccaggcttcaggactcctgcgtccttcagtctcccggacacagcctatcgc
agacctgagtacggaactggtttctactctgaaggagactacacctcccctgacgggccc
ccccccaggcctccatccttccgcctcctcccggacccccgggctgagacggcgttcggc
gcccggcctcctcctccgtcccagccggacggccctcctctcagcctcgctccgttgccc
gggggtcactaccccgaccaggaggaggaggaggaggaggaggagacttggaggccgggg
ccgccgttcccaccctttactgagcagagaggaggaggaggaggaggagatagagtaaga
gggggaggaggaggaggaggaggagcactgaggagggtgtatgaaaggcgttacgagtcg
tacgccggcctgagcgcagcagaggattgtgggatattgcacggctgtgagaacggcagg
tgtattcgcgtggcggagggttacacctgtgactgctaccaaggatacgaactggacatg
acctccatgacctgcatagatgtaaacgagtgtgaggacggcgtcagcgtcgagttcccg
tgtgtgaacgctcgctgtgtcaacaccagcggctcgtttcgctgcgtctgcaggagaggc
tacgtcatgtcccgcagacccaaccactgcgtggccgcgtag
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