Hippoglossus stenolepis (Pacific halibut): 118106133
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Entry
118106133 CDS
T08308
Symbol
trpc4b
Name
(RefSeq) short transient receptor potential channel 4b
KO
K04967
transient receptor potential cation channel subfamily C member 4
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
hsp04040
]
118106133 (trpc4b)
Ion channels [BR:
hsp04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
118106133 (trpc4b)
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GFIT
Motif
Pfam:
Ion_trans
TRP_2
Ank_2
Ank
Ank_4
Ank_3
Ank_5
PKD_channel
YVC1_C
BAR_4
CCDC22_CC
Motif
Other DBs
NCBI-GeneID:
118106133
NCBI-ProteinID:
XP_035010314
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Position
4:5904102..5913723
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AA seq
882 aa
AA seq
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MSQLYYGNTDSSLYRDSIPLRIVRAESELSSLEKAYLGEVDKGDYASVKEDLEDAEIYFR
ININCIDPLGRTALLIAIENENLEIIELLLSYNVYVGDALLHAIRKEVVGAVELLVNHKR
RGDKQIPPMLQDKQFSDFTPDITPIILAAHTNNYEIIKLLVQRGVSIPQPHAVRCNCVEC
VSSSDVDVLRQSRSRLNIYKALASPSLIALSSEDPFLTAFQLSWELKELSKVENEFKSEY
EELSRTCKQFAKSLLDQTRSSKELETILNYRDDINPLLDDNNDLARLKLAIKYSQKEFIA
QPNCQQLLASRWYDQFPGWRRRHWAAKFLTCSFIGLLFPLLSIFYLISPKSCYGLFIRRP
FIKFICHTASYLTFLFLLFLASQHISNSQRDCQGPAPTIVEWMILPWVLGFIWMEIKQMW
DNGFQDYIDDWWNLVDFIMNSLYLATISLKLVAYAKYSGFKYREDWEMWHPTLVAEALFA
IANIFSSLRLICLFTANSHLGPLQISLGRMLLDILKFLFIYCLVLVAFANGLNQLYFYYE
TEEAVCKGIRCKDQNNAFSTLFETLQSLFWSVFGLINLHVTDMNGTDHQFTEFVGSTMFG
TYSVISQIVLLNMLIAMMNNSYQHIADHADIEWKFARTKLWMSYFEEGGTLPSPFNIIPS
PKAVFYLMRWIKIFLFRRKSLKMHDTFETLGRRAAKSVRSNHQYQEVLRNLVKRYVAAMI
RGAKTAEGLTEENFKELKQDISSFRYEVLGMMKGKSQGRASSALAYPGNPFKYSPKFPID
EPEQKQSMFEVVTTALQSGASNTTGSDRLTNGAAVLSPTGQTQDELSKDVSDEGSHNFEK
ISLSPKDSLGSGGKKLFQTEKGFQIRQKKKKLPGPHNSDQKP
NT seq
2649 nt
NT seq
+upstream
nt +downstream
nt
atgtcacagctgtattacggcaacactgacagctccttgtacagggacagcatccccctg
cggatcgtgagggccgagtccgagctctcttccctggagaaggcctacctgggggaagtc
gataagggggactacgccagcgtgaaagaagacctggaggatgctgagatttatttcagg
atcaacattaactgcatcgaccccctgggacgcacggccttactcatcgccatcgaaaac
gagaacctggagatcatcgagctgctgctcagctataacgtgtacgtgggggatgccctg
ctgcacgccatccgcaaagaggtggtgggcgccgtggagctgctggtcaatcacaagagg
cgtggggacaaacagattccaccaatgctgcaagacaagcagttttcagacttcaccccg
gacatcactccaatcatcctcgcggcccacaccaacaactacgagatcatcaaactgctc
gtgcagcgaggagtttccatccctcagccgcacgccgtacgctgcaactgcgtggagtgc
gtctccagctcagacgtggacgtcctgcgtcaatctcgctcccgtctgaacatctacaag
gccctcgccagcccgtccctcatcgccctctcaagcgaggatcccttcctcacggctttc
cagctcagctgggagctgaaggagctcagcaaagtggagaatgagttcaagtcagagtac
gaggagctctcccgtacgtgtaaacaatttgcaaaaagcctacttgaccaaacccgaagc
tctaaagagttggagacaatcctcaactaccgagatgacataaatcccctgctggatgac
aataatgacctggcacgacttaaactggctatcaaatacagccagaaagagtttatcgcg
cagcccaactgtcagcagctgctggcgtctcggtggtatgatcagttcccgggctggagg
aggcgtcactgggcagcaaagttcctcacctgcagcttcatcggcctcctgtttccgctg
ctgtccatcttctacctgatctctccaaagagctgctatggcttattcatccgcaggcct
ttcatcaagttcatctgtcacaccgcctcctacctgaccttcctcttcctgctcttcttg
gcctcgcagcacatatccaattcacagcgggactgtcagggcccagcccccaccattgtg
gagtggatgatcctgccttgggtgcttggttttatatggatggagatcaaacagatgtgg
gataatggtttccaggactacatagacgactggtggaacctagtggacttcataatgaac
tccttgtatcttgcaaccatttctctgaagcttgttgcctatgcaaagtacagtgggttt
aaatacagagaagactgggaaatgtggcacccgactctggtggcagaggccttgttcgcc
attgccaacatcttcagctcgttgcgcctcatctgcctttttactgccaactcccatctg
gggcccttacagatctcgctgggtcgaatgctcctggacatcctcaagttcctcttcatc
tactgcctggtgcttgtagccttcgccaacggccttaaccagctgtacttttactatgaa
acagaagaggcggtttgcaaggggattcgctgcaaggaccagaacaatgccttctcaacg
ctgttcgaaacgctgcagtcgttattttggtccgtgtttggcctgatcaacctccacgtg
accgatatgaatggaacggaccatcaattcactgagtttgtgggcagcaccatgttcggc
acatacagcgtgatctcccagatcgtgcttctgaacatgctcattgcgatgatgaacaac
tcctaccagcacatagctgatcatgctgatatagaatggaaatttgcaagaacaaaatta
tggatgagctactttgaagaaggggggactttgccgtctccgtttaacataatacccagt
ccaaaggcagttttttatctgatgagatggataaagatatttttattcaggagaaaaagc
ctgaaaatgcacgataccttcgaaacattggggagacgtgcggctaaaagtgtaagatca
aaccatcagtaccaggaggttttaaggaaccttgtgaagcgatatgtcgctgcgatgatc
agaggcgccaagacagcggaaggtttgacggaagagaatttcaaggagctgaagcaggat
atctccagcttccgctatgaagtcctgggaatgatgaagggtaaatctcaaggaagggca
agctccgccttggcatatcctggaaacccgttcaaatattctcccaaattccccattgat
gagccggaacagaagcagagcatgtttgaagtggtcaccaccgccctacagagcggagct
tccaacaccaccggctctgacaggctaaccaacggtgcagctgttctgtcccctacagga
cagactcaggacgagctgtccaaggatgtttcagatgaggggtctcataactttgaaaaa
atatcattgtcaccaaaagattcactgggatctgggggcaaaaaactatttcagaccgag
aaaggcttccagataaggcagaagaaaaaaaaacttcctggtccccataattctgatcaa
aagccatga
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