Hippoglossus stenolepis (Pacific halibut): 118106147
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Entry
118106147 CDS
T08308
Name
(RefSeq) high mobility group-T protein
KO
K10802
high mobility group protein B1
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp03410
Base excision repair
hsp04140
Autophagy - animal
hsp04217
Necroptosis
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
118106147
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
118106147
09143 Cell growth and death
04217 Necroptosis
118106147
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
hsp03036
]
118106147
03400 DNA repair and recombination proteins [BR:
hsp03400
]
118106147
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
hsp04147
]
118106147
Chromosome and associated proteins [BR:
hsp03036
]
Eukaryotic type
Nucleosome assembly factors
HMG (high mobility group) proteins
118106147
DNA repair and recombination proteins [BR:
hsp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
118106147
MMR (mismatch excision repair)
Other MMR factors
118106147
Exosome [BR:
hsp04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
118106147
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box_2
HMG_box
HMG_WDHD1
HMG_box_5
NOA36
Cwf_Cwc_15
Motif
Other DBs
NCBI-GeneID:
118106147
NCBI-ProteinID:
XP_035010340
LinkDB
All DBs
Position
4:6414568..6417247
Genome browser
AA seq
200 aa
AA seq
DB search
MGKDPKKPRGKMSSYAYFVQTCREEHKHKHPGVSVNFSDFSKKCSERWKTMSQKEKGKFE
DMAKLDKVRYEREMTSYIPPKGTKKKRFKDPNAPKRPPSAFFLFCADFRPKVKIDTPGLT
IGDTAKRLGEMWNGSSAEKKQPYEKKAAKLKEKYDKEIIAYRTKGKVEVAAAAAPVDDDD
DDEEEDGDDDEDDDDDDDDE
NT seq
603 nt
NT seq
+upstream
nt +downstream
nt
atggggaaggacccgaagaagccgaggggcaaaatgtcctcctatgcttactttgtgcaa
acctgccgggaggagcacaagcataagcatcccggtgtcagtgtcaacttctcagacttc
tccaagaaatgctctgagagatggaagacaatgtcacagaaggagaagggcaagtttgaa
gatatggccaaactagacaaggtgcgctacgagagggaaatgacgagttacatccctccc
aagggcacgaagaagaagcgattcaaggaccccaacgcccccaagagaccaccgtctgca
ttcttcctgttctgtgcagactttcgtcccaaggtcaaaattgatactcctggactcacc
atcggtgacacagcgaagaggctgggagagatgtggaacggctcctctgcggagaagaag
cagccgtatgagaagaaggctgccaagctgaaggagaaatacgacaaggaaatcattgct
taccgtacaaagggcaaagtggaagttgcagcagctgctgcaccagtggatgatgatgac
gatgacgaagaagaggatggagacgatgacgaagatgatgatgacgacgacgatgacgag
tag
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integrated database retrieval system
