Hippoglossus stenolepis (Pacific halibut): 118106180
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Entry
118106180 CDS
T08308
Symbol
clpb
Name
(RefSeq) caseinolytic peptidase B protein homolog
KO
K03695
ATP-dependent Clp protease ATP-binding subunit ClpB
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
hsp03110
]
118106180 (clpb)
Chaperones and folding catalysts [BR:
hsp03110
]
Heat shock proteins
HSP100
118106180 (clpb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
Ank
Ank_2
Ank_3
ClpB_D2-small
AAA_5
AAA
Ank_4
Ank_5
Zeta_toxin
Sigma54_activat
AAA_22
bpMoxR
AAA_24
AAA_16
Torsin
AAA_3
nSTAND3
YchF-GTPase_C
NACHT
ATPase_2
RuvB_N
ABC_tran
RNA_helicase
Motif
Other DBs
NCBI-GeneID:
118106180
NCBI-ProteinID:
XP_035010405
LinkDB
All DBs
Position
4:16261119..16298570
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AA seq
675 aa
AA seq
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MLSSVPTRLIMRRSRSLSPCSRVLQTSASGGACQGVRETPAESNRNPIVSTSRVSRRGIL
TEDPAATSVNPTVQYHHLTPRWLSSLENRRSSWAALASRGRNNSRYWEESGGGQGRGSGG
GAGRAGAASVGVLSAAAVAFCLRKDSDDKGDALLEAARTNQSQEVTRLLKEGVDPNCRHR
LGWTALMVAAMNRQHGVVKVLLEAGADPNAGDHFNNVYDTSREKGIHSLEVLVSREDEFS
SRLSSRAGFRGCTALHYATLADDPHTVRMLLEAGANPLHTNGLEHTARAYAKEGDVGTVL
LEWEGKFQEAQARREAEERRRFPLERRLKEYIIGQEGSINIVASAIRRKENGWYDEEHPL
VFLFLGSSGIGKTELAKQVARYMHKDIKKGFIRMDMSEFQEKHEVAKFIGSPPGYVGHEE
GGQLTKLLKACPNAVVLFDEVDKAHPDVLTIMLQLFDEGRLTDGKGKTIECKDALFIMTS
NVASDEIAEHALQLRHEAEEVTRRKLADKLEDVQKIEDIKISRQFKESVIRPILKAHFRR
DEFLGRINEIVYFLPFCHSELLQLVSKELSFWAKKAKQRHDITLQWDRPVLDLLAGGYNM
HYGARSIKHEVERRVVNQLAAAYEQELLPKGCTLRLSVQSDGEEEQSSQSLRLEVVGKDS
SSRMLDIRPPLSPEH
NT seq
2028 nt
NT seq
+upstream
nt +downstream
nt
atgttatcgtccgtccccaccaggctcatcatgcgaaggtcgcgcagcctgtcaccgtgc
agccgcgtgctccagaccagcgcgagcggcggcgcgtgtcagggcgtccgcgagacaccg
gcggagtcgaaccggaacccgatcgtctccacgtcccgcgtgtccaggagggggatttta
accgaggaccccgccgcgaccagcgtcaaccccacggtgcagtaccaccacctcacccct
aggtggctgtccagcctggagaaccgccgcagctcgtgggcggccctggccagcaggggg
cgcaacaacagccgctactgggaggagagcggcggaggtcagggccggggctcgggtgga
ggagccggccgggcaggagcggcctctgtcggcgtgctgtctgctgcagccgtggccttc
tgcctgaggaaagactctgatgacaaaggtgatgctcttctggaggcagcgaggaccaat
caatctcaagaagtgaccaggctgttaaaggaaggcgtggacccaaattgccgccaccgt
ctcggttggaccgctctcatggtggcagccatgaaccgacagcatggtgtggtgaaggtt
ctgcttgaagctggtgctgacccaaacgctggagatcacttcaacaacgtctacgacacc
tcgcgggagaaaggcatccactctctggaagttctggtgtccagagaggatgagtttagc
agcaggctcagcagcagggctggtttccgtggctgcacggcgctgcactacgccacactg
gctgacgacccacacaccgtccgcatgctgctggaggctggtgccaaccccctgcacacc
aatggtttggaacacactgcaagggcctatgctaaggagggagacgtgggcacagtgctg
ctggagtgggagggaaaattccaggaggcccaggctcgacgggaggcagaggagaggagg
aggttccccctggagaggaggctgaaggagtacatcatcggacaggaggggtccatcaat
attgtggcctcagccatcaggaggaaggagaatggttggtacgacgaagagcatcccctc
gtgttcctcttcctcggttcatcaggaatcggtaagacggagttggccaaacaggtggcc
cgctacatgcacaaggacattaaaaagggtttcatccgtatggacatgtccgagttccag
gaaaaacatgaggtggcaaagttcatcggctctccgccggggtacgtgggacacgaggag
ggaggtcagctgaccaagctgctgaaggcgtgtcccaacgccgtggtcctgtttgacgag
gtggacaaggctcatcctgacgtactcaccataatgctgcagctctttgacgagggtcgc
ctcacagacggtaaggggaagaccatcgaatgtaaagacgccctcttcatcatgacgtct
aatgtagcaagtgatgaaattgccgagcatgcactgcaactccgtcacgaggctgaagag
gtcacccgcagaaagctggctgacaagcttgaggatgtacagaaaattgaggacatcaaa
atctcccgacagtttaaagagtctgtgattcgaccaatcctgaaggcccatttccggagg
gacgagtttctcggtcggatcaatgaaattgtatacttcctgccattctgtcactcagag
ctgctgcagctggtcagcaaagagctcagcttctgggccaagaaggccaagcagcgccat
gacatcactctgcagtgggatcgcccggtactggacctgttagcgggcgggtataatatg
cattatggagcacgctccatcaagcatgaggttgagcggcgggtcgtcaaccagttagcc
gcagcgtacgagcaggagctgctgccaaagggctgcacgctgcgtctgtccgtccaatca
gacggcgaggaggagcagagctcgcagagtctgcggctcgaggtggtgggaaaggacagc
tcgtccagaatgctggacatccgtccaccgctcagccccgaacactga
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