Hippoglossus stenolepis (Pacific halibut): 118106220
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Entry
118106220 CDS
T08308
Symbol
pdgfd
Name
(RefSeq) platelet-derived growth factor D
KO
K05450
platelet derived growth factor C/D
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp04010
MAPK signaling pathway
hsp04020
Calcium signaling pathway
hsp04510
Focal adhesion
hsp04518
Integrin signaling
hsp04540
Gap junction
hsp04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
118106220 (pdgfd)
04020 Calcium signaling pathway
118106220 (pdgfd)
09133 Signaling molecules and interaction
04518 Integrin signaling
118106220 (pdgfd)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
118106220 (pdgfd)
04540 Gap junction
118106220 (pdgfd)
09142 Cell motility
04810 Regulation of actin cytoskeleton
118106220 (pdgfd)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
hsp04052
]
118106220 (pdgfd)
Cytokines and neuropeptides [BR:
hsp04052
]
Cytokines
Growth factors (RTK binding)
118106220 (pdgfd)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CUB
PDGF
Motif
Other DBs
NCBI-GeneID:
118106220
NCBI-ProteinID:
XP_047195550
LinkDB
All DBs
Position
4:complement(16801601..16853894)
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AA seq
371 aa
AA seq
DB search
MCPPLLLQMWMVLLLGALTGVARAQVSTVKVIRGNMRRDDLYRKEENITVTPVGGAIHSP
RYPNAYPRNLLLSWKLLSPPGSRIHLEFDGHFGLEEAENGVCRYDFVEVEDQSETSTIIW
GRWCGQKTPPRLNSKTNMLRVTFKSDDYFVAKPGFKVYYSLQHDAPLPAANTNWEVVTML
MSDSGGGQMMPVTVTEVPFSLEDLDRTIAAFDTVEQLLRSLNPDTWRQDLDSIYTQTHIH
YISRAYHLASRHNKVDLNRLYDDVKRYSCTPRNYSVNLREELRATNAVFFPRCLLVKRCG
GNCGCGTNNWNNGCTCQASKTVPKLHEVLKYAPEVTLPQRHRRPRVRWIIDEIFLSHHET
CECACPSQPPR
NT seq
1116 nt
NT seq
+upstream
nt +downstream
nt
atgtgtccaccgctgcttctccagatgtggatggttttattgttaggggctttaaccggg
gtcgcgagggctcaggtctccacggtcaaagtgataagaggcaacatgaggagagacgac
ttgtaccgcaaagaggaaaacatcacagtaacaccagtgggtggagccatccacagccca
cgctaccctaacgcttatccccgcaacctgctgttgtcatggaaactgctgtcaccgcca
gggagccgcattcacctggagtttgacggacacttcggcctggaggaggctgagaatgga
gtgtgcaggtatgactttgttgaagtggaggaccaatcagagacaagcactataatttgg
ggtcgctggtgtgggcagaaaactccgcctcgcctcaactccaaaaccaacatgctcaga
gtcaccttcaagtctgatgattactttgttgcaaagccgggattcaaagtctactactcc
ctgcagcacgatgctcctctacctgcagccaacaccaactgggaggttgtcactatgctc
atgtcggacagcggtggagggcagatgatgcccgtcacggtcacagaggttcctttctca
ctggaggatctggaccggaccatagctgccttcgacacggtggagcagctgctcaggtcc
ctgaacccagacacctggagacaggacctggacagcatctacactcagacacacatacat
tatatatccagggcctatcatctggcaagcagacataataaagttgatctgaaccgtcta
tatgatgatgtcaagcgctacagctgtaccccacgcaactactctgtaaacctgcgcgag
gagctgagggccaccaacgccgtcttcttccctcgatgtctgctggtcaaacgctgcgga
ggcaactgcggctgcggaactaacaactggaacaacggctgcacctgtcaggcctccaag
acggtgcccaaactacacgaggtgctgaaatacgccccagaggtcactttgcctcaacgc
catcggcggccacgggtgcgttggatcatagacgagatcttcctctcacaccatgaaacg
tgcgagtgtgcgtgtccctcccagcctcctcgctga
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