Hippoglossus stenolepis (Pacific halibut): 118106220
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Entry
118106220 CDS
T08308
Symbol
pdgfd
Name
(RefSeq) platelet-derived growth factor D
KO
K05450
platelet derived growth factor C/D
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp04010
MAPK signaling pathway
hsp04020
Calcium signaling pathway
hsp04510
Focal adhesion
hsp04540
Gap junction
hsp04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
118106220 (pdgfd)
04020 Calcium signaling pathway
118106220 (pdgfd)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
118106220 (pdgfd)
04540 Gap junction
118106220 (pdgfd)
09142 Cell motility
04810 Regulation of actin cytoskeleton
118106220 (pdgfd)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
hsp04052
]
118106220 (pdgfd)
Cytokines and neuropeptides [BR:
hsp04052
]
Cytokines
Growth factors (RTK binding)
118106220 (pdgfd)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CUB
PDGF
Motif
Other DBs
NCBI-GeneID:
118106220
NCBI-ProteinID:
XP_047195550
LinkDB
All DBs
Position
4:complement(16801601..16853894)
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AA seq
371 aa
AA seq
DB search
MCPPLLLQMWMVLLLGALTGVARAQVSTVKVIRGNMRRDDLYRKEENITVTPVGGAIHSP
RYPNAYPRNLLLSWKLLSPPGSRIHLEFDGHFGLEEAENGVCRYDFVEVEDQSETSTIIW
GRWCGQKTPPRLNSKTNMLRVTFKSDDYFVAKPGFKVYYSLQHDAPLPAANTNWEVVTML
MSDSGGGQMMPVTVTEVPFSLEDLDRTIAAFDTVEQLLRSLNPDTWRQDLDSIYTQTHIH
YISRAYHLASRHNKVDLNRLYDDVKRYSCTPRNYSVNLREELRATNAVFFPRCLLVKRCG
GNCGCGTNNWNNGCTCQASKTVPKLHEVLKYAPEVTLPQRHRRPRVRWIIDEIFLSHHET
CECACPSQPPR
NT seq
1116 nt
NT seq
+upstream
nt +downstream
nt
atgtgtccaccgctgcttctccagatgtggatggttttattgttaggggctttaaccggg
gtcgcgagggctcaggtctccacggtcaaagtgataagaggcaacatgaggagagacgac
ttgtaccgcaaagaggaaaacatcacagtaacaccagtgggtggagccatccacagccca
cgctaccctaacgcttatccccgcaacctgctgttgtcatggaaactgctgtcaccgcca
gggagccgcattcacctggagtttgacggacacttcggcctggaggaggctgagaatgga
gtgtgcaggtatgactttgttgaagtggaggaccaatcagagacaagcactataatttgg
ggtcgctggtgtgggcagaaaactccgcctcgcctcaactccaaaaccaacatgctcaga
gtcaccttcaagtctgatgattactttgttgcaaagccgggattcaaagtctactactcc
ctgcagcacgatgctcctctacctgcagccaacaccaactgggaggttgtcactatgctc
atgtcggacagcggtggagggcagatgatgcccgtcacggtcacagaggttcctttctca
ctggaggatctggaccggaccatagctgccttcgacacggtggagcagctgctcaggtcc
ctgaacccagacacctggagacaggacctggacagcatctacactcagacacacatacat
tatatatccagggcctatcatctggcaagcagacataataaagttgatctgaaccgtcta
tatgatgatgtcaagcgctacagctgtaccccacgcaactactctgtaaacctgcgcgag
gagctgagggccaccaacgccgtcttcttccctcgatgtctgctggtcaaacgctgcgga
ggcaactgcggctgcggaactaacaactggaacaacggctgcacctgtcaggcctccaag
acggtgcccaaactacacgaggtgctgaaatacgccccagaggtcactttgcctcaacgc
catcggcggccacgggtgcgttggatcatagacgagatcttcctctcacaccatgaaacg
tgcgagtgtgcgtgtccctcccagcctcctcgctga
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