Hippoglossus stenolepis (Pacific halibut): 118106275
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Entry
118106275 CDS
T08308
Symbol
cdon
Name
(RefSeq) cell adhesion molecule-related/down-regulated by oncogenes isoform X1
KO
K20033
cell adhesion molecule-related/down-regulated by oncogenes
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
118106275 (cdon)
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GFIT
Motif
Pfam:
Ig_3
I-set
ig
Ig_2
fn3
Ig_DSCAM-DSCAML_C
V-set
Pur_ac_phosph_N
C2-set_2
Ig_6
Y_Y_Y
Adeno_E3_CR1
Ig_VEGFR-1-like_5th
Motif
Other DBs
NCBI-GeneID:
118106275
NCBI-ProteinID:
XP_035010576
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All DBs
Position
4:3750140..3781090
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AA seq
1125 aa
AA seq
DB search
MDSGLRVLLSTVLCLSQSLLISCSSQYPFFSSEPASLVQSRGSVARLRCSVNPPSATVSW
RFRGRPLDRDALPDVELNGGSLTISSLKPGHAGAYQCVARFDHGPAIASRLARVDIAEIS
EYEAGRRRSLSVQEGSPVLIECPLPPSVPAARPRLRVRGEWMEASTGDYLVLPSGNLQIV
SASVQHQGMYKCGALNPVTGETVLQPHGTKLSVKHLDAPSSSVRIVYPTAPMTVVVVQSQ
PLTLECIVSGRPAPAAKWFKDGKQVTPGPHRQQQHNNLAFATVTRSDEGRYTCTAESEQG
SVVSANYTVNVLEPVSVLQGLTDQIVSPGSSAYFTCAAKGSPSPNITWLFNADPVTPSRR
FQISGSSLLITDVTPQDVGVYQCVLDNGIGSAQSQGMMTTPSDPQPGSSAARQPEVSPSL
HPMQSDEGRDEDSVNAPADRSVNDRPTPEAPIITSPPQTHKPDIYDLEWRSGRDGGSPIV
AYFVKYRKVDEMGTVVGSWQTVRVPGSEKTLRLSELESTSLYEVLMVARSTAGEGQPAML
TFRTGKEKSTTAVKTASKPPVVLMPPKAPEDKTPNTHFGVIIHDRVPEAPDRPTISMATE
SSVYVTWVPRANGGSPITAFRVEYRRGRVAEWVVAADNISPLKLSVEVRNLEPGSNYKFR
VAAMNMYGESPHSIPSKPYQVPQASPRMADRPVVGPHISSTDAISDTQIMLRWTVRTPLT
HTVHTYSPTSNNNTPIQGFYIYYRPTDSDNDSDYKRDVVEGVKPWHMIGHLQAETSYDIK
MQCFNDGGESEYSNVMICETKARQTPGSPSQHPITPPGPPPQETPNTPGGLLYLIVGCVL
VVMVLILLAFIAMCLWRNRQQNNMHKYDPPGYLYQPAEMNGHVLEYTTLPGTSRINGGVH
GGYGHNGPVMPQGCHHLHHKLPNGLALLNGSGGLFSPGHPHGHDGTLPHGTRDCELSHPH
HHHNGGGMYTALPQTESSDCMSCQNLCNNNRCYNKTNGTFSSGTLPLMHRVAPCQQDGLE
MVPLGQVSSQCHQMTSGDQEADEGYRPDEHRESSPSQHSCCLIGNNENCPADNTAEEELE
CEDLDGPVLCWESLGLPDLDCDEKPGWISSSSLAGELIQPGPQEV
NT seq
3378 nt
NT seq
+upstream
nt +downstream
nt
atggacagtggcctaagggtcctcctgtccactgtgctgtgtctcagccagtctctgctc
atcagctgctcatctcagtacccgttcttcagctccgaacccgcctccctggttcagagt
cgaggctccgtagctcgtctgcgctgctcagtaaatcctccgtcagccaccgtgtcctgg
cgcttccgaggccgtcccctggaccgggacgccctgcccgatgtggagctcaacggaggc
tccctcaccatttcctcccttaagccaggccacgctggcgcctatcagtgtgtggcacgc
ttcgaccacgggccggccatcgccagtcgcctcgcgcgtgttgacatagcagaaatttcc
gaatatgaagctggcagacgacggtcgttatcagtgcaggaaggaagcccggttctcatc
gagtgtcctctgccgcccagcgtccctgcagcgcgacccagactccgagttcgaggggag
tggatggaagcgtccacaggtgattatttagttcttccatctggaaaccttcagattgtc
tccgcttcagtccagcaccaggggatgtacaaatgtggtgcgttgaaccctgtcaccggg
gaaaccgtcctgcagcctcatggcaccaagttatcggtgaaacatttagacgccccctcg
tcctcggtgcggatagtttaccccactgcccccatgacggtggtggtggtgcagtcgcag
cccctgacgctggagtgtatcgtgtctggtcgtcctgcaccggcggccaaatggttcaag
gacggtaagcaggtgacaccggggcctcatcgccaacaacagcacaacaacctggcgttt
gcgacggtgacgaggagcgacgaagggcggtacacctgcaccgctgagagcgagcagggg
agcgtggtcagcgccaactacactgtgaacgtcctcgagcccgtgtctgtcctccagggt
ctgacggaccagatcgtctctcccggctccagtgcttactttacctgcgcggcgaaagga
agcccctccccgaacatcacgtggctgttcaacgctgatcccgtcacgccgtcacgccgc
tttcagatctctggatcctcgctccttatcacagacgtgacaccacaggatgtaggcgtt
taccagtgtgtgttggacaacgggatcggctcggcacagtcgcagggaatgatgacaaca
ccatcagatccacagccgggctccagcgccgcccggcagccggaggtgtccccctctctc
catcccatgcaaagcgacgagggccgagacgaagactcggtcaacgcgccggccgaccgg
agcgtcaacgaccgtcccaccccagaggcgccgatcatcaccagcccgccgcagacccac
aagcccgacatctacgacctggagtggaggtcggggcgggacggaggcagtccgattgtg
gcctattttgtcaaataccgcaaagtcgatgaaatgggaacagtggtggggagctggcag
acggttcgcgtgcctggcagcgagaagaccctgcggctgtcggagctggagtcgaccagt
ctctacgaggtgctgatggtggctcggagcaccgcgggcgagggccagcccgccatgctc
accttccgcacgggcaaagagaaaagcaccaccgccgtcaagactgcgtccaaacctccc
gtcgtcctgatgccgcccaaagccccggaggacaaaacccccaacacgcacttcggagtc
atcatccacgacagagtgcccgaggcccccgatcgcccaaccatctccatggcgactgaa
agttcggtgtatgtcacctgggtcccgagggcaaacggcggctctccgatcacggccttc
cgcgtggaatacagacgcggccgcgtggcggagtgggtcgtggctgcggataacatctcg
cctctcaaactgtccgtggaagttcgcaacctggagcctggctccaactacaagtttcgc
gttgcggccatgaacatgtacggcgagagcccccacagcatcccctccaagccctaccag
gtgccacaggccagcccacgcatggcggaccgccccgtggtcggaccccacatctcctcc
acggacgccatcagtgacacacagatcatgctgcgctggactgtgcgtacaccactgaca
cacactgtgcacacgtatagtcccacgagtaacaacaacactccgatccaaggtttctac
atttactaccgacccactgacagcgacaacgacagcgactacaaaagagatgtggtggaa
ggtgtaaaaccctggcacatgattggtcacctccaggccgagacgtcctacgacatcaag
atgcagtgcttcaacgacggcggggagagcgagtacagcaacgtcatgatctgcgagacc
aaagcacgtcagaccccggggtcgcccagccagcaccccatcaccccacccgggcctccg
ccacaggagacgcccaacacccctggcggtctgctgtacctgattgtgggctgcgtcctg
gtggtgatggtgctcatcctgctggctttcatcgccatgtgcctgtggaggaatcgtcag
cagaacaatatgcacaagtacgaccctcctggctacctgtaccagccagcggagatgaac
ggccacgttctcgagtataccacgctgcccggcaccagccgcatcaacggcggggtccac
ggcggctacggacacaacggccccgtgatgccccaaggctgccatcacctccaccacaaa
ctccccaacggcctggcgctgctcaacggctccggtggcctgttctcgcccggccaccca
cacggccacgatggcacgctgccccacggcaccagagactgcgagctctcgcacccgcac
caccaccacaacggcggaggcatgtacacagctctgccccaaacggagtcgtctgattgt
atgagctgtcagaacctctgcaataacaacagatgttacaacaagaccaatggcactttc
tccagtggcacgctgcctctaatgcaccgcgtggcgccgtgccagcaggacgggctggag
atggtgcctctgggccaggtctcctcgcagtgtcaccagatgacctccggcgaccaggag
gcggatgaagggtaccggccggacgagcacagggagtcctcgccctcgcagcattcctgc
tgtctgattgggaacaatgaaaactgtccggcagacaacactgcggaggaggagctggag
tgcgaggacctggacgggcctgtgctgtgctgggagagcctgggcctgccggacttggac
tgtgacgagaagcccgggtggatctccagcagcagcctggcaggagagctgatccagccg
ggcccacaggaggtctga
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