Hippoglossus stenolepis (Pacific halibut): 118106328
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Entry
118106328 CDS
T08308
Symbol
stx1a
Name
(RefSeq) syntaxin-1A
KO
K04560
syntaxin 1A
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
118106328 (stx1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hsp04131
]
118106328 (stx1a)
Membrane trafficking [BR:
hsp04131
]
SNARE
Syntaxin (Qa)
Stx-PM
118106328 (stx1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Syntaxin
SNARE
Syntaxin_2
ATG17_like
AAA_13
PspA_IM30
Ferritin
Lzipper-MIP1
COG2_C
Spectrin_Anc-1
DUF848
FAN1_TPR
Dna2
GNVR
CCDC28
LMBR1
Laminin_II
FUSC
ETRAMP
EcoEI_R_C
Motif
Other DBs
NCBI-GeneID:
118106328
NCBI-ProteinID:
XP_035010659
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All DBs
Position
4:complement(10395611..10448852)
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AA seq
287 aa
AA seq
DB search
MKDRMQELRHGKETTEEEDEVAVGMEKGFMDEFFEQVEEIRGFIESLAEKVEEVKRKHSA
ILASPNPDEKTKADLEDLMADIKKLANKVRSKLKSIQQTIEQEEGQNRSSADLRIRKTQH
STLSRKFVEVMSEYNTTQSDYRERCKGRIQRQLEITGRNTTNEELESMLESDNPAIFTSG
IIMDNITQQAMNEIETRHTEIIKLENSIRELHDMFMDMAMLVESQGEMIDRIEYNVEHSV
DYVERAVSDTKKAVKYQSKARRKKIMIIICCVVLGIVIASIIGGTLA
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atgaaggaccgcatgcaagaacttcgacacgggaaggagacgacagaggaagaggatgaa
gtcgccgtgggaatggagaaaggctttatggacgaattctttgaacaggtggaagaaatc
cggggttttatcgagtctctggcagagaaagttgaagaggtcaagaggaagcacagcgcc
atcctcgcctcacctaaccctgatgagaaaactaaggctgatctggaggatttaatggct
gacatcaagaagttggccaacaaagtacgatccaaattaaagagtatccagcaaaccatc
gagcaagaggaaggacagaacaggtcatcagctgacctgaggatacgtaaaacacagcac
tccacactgtcccgcaagtttgtcgaggtgatgtccgaatacaacaccacgcagtcggac
tacagggagcgctgcaagggacgcatccagaggcagctggagatcactgggagaaataca
accaacgaggagctggagagcatgttggagagtgacaacccagctatcttcacttcaggg
atcattatggacaacatcacgcagcaagcgatgaacgagatcgagacgcggcacactgag
atcatcaagttggagaacagtattagagagcttcacgacatgttcatggatatggccatg
ctggtggagagtcagggggaaatgatagaccgcatagagtacaatgtggagcactcagta
gactatgtggagagggcagtatcagacacgaagaaggcggtaaaataccagagtaaagcg
cggaggaagaaaatcatgattattatatgctgtgtggttctggggattgtcattgcttcc
atcatcgggggaacgttggcctaa
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