Hippoglossus stenolepis (Pacific halibut): 118106350
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Entry
118106350 CDS
T08308
Symbol
samsn1a
Name
(RefSeq) SAM domain-containing protein SAMSN-1a isoform X1
KO
K23707
SAM domain-containing protein SAMSN-1
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
hsp04990
]
118106350 (samsn1a)
Domain-containing proteins not elsewhere classified [BR:
hsp04990
]
Src homology (SH) domain-containing proteins
Other SH2 and SH3-containing proteins
118106350 (samsn1a)
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SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SPIDER
SAM_2
SAM_1
SH3_2
SAM_TNK
Motif
Other DBs
NCBI-GeneID:
118106350
NCBI-ProteinID:
XP_035010702
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Position
4:23237119..23255589
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AA seq
668 aa
AA seq
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MNLFCFSLEGSMDSLYEAVQSSSDGPPKPIPSRSSSRSCSRSCSPAVLLDNNTKWRGSGR
SISMEMPQTQATNSNKKIRRTHIYKSASDNETLDNPGCNTTVWQGAKSQEDLVHITNNHN
EETRKPNHRTETKGGKGAHHSGTRKKEKLPSSQSVHVTGVVPESKPAVKRSQKTGKKPAG
KSGKEASKKSHKSTVHSQPTSMSPPMGPHYLDVPYRSDRRPYLGKSSTLPSQENTTPGRC
TDMASLPGGATPTHTYHQRWSNPGDSSPSWGTVQHTCRRPLTEYRMYSHDFTPANGKEWE
ETQEQAQDYSLKQDCKPQIPPKVSRSVTDLDLSEPDRSTSFGRFEGLRHHLSQAKPEENG
TNMVVEECESSDPNKAAGLGKKMKAISLTMRRKMGKKHAKYFSEEPGDDTDKDPEAEAES
STAAEKDYAKTSNSLESLYSGQSTSSGVTSESNGSAQKDSVRLEEDVCYQGPFCGRARVH
TDFVPSPYDTDSLKLKVGDIINIICKPPMGIWTGMLNNKVGNFKFIYVDVLVEKEEEEEE
VPKIRQQKLCKRPRPKTLLELLERLNLEEYASALLLNGYQTVEDLMHLQEKHLIELNVND
PEHRHRLLAAAECRYTEGDDVRDVEEHKSSHSQKEEDSDCPRDSGCFIPSECSDSKEDTE
PLTDAGDS
NT seq
2007 nt
NT seq
+upstream
nt +downstream
nt
atgaaccttttctgcttctcactggaggggtctatggacagcctgtatgaggcggtgcag
agctccagcgacgggcccccaaagcccattcccagccgctcctccagccgctcctgcagc
cgctcctgcagcccagcggtcctgctggacaacaacacaaagtggcgaggctccgggaga
tcaatatccatggagatgcctcagacgcaggcgaccaactctaataaaaagataagaaga
acacatatatacaaatctgcatcagataatgaaacattggataaccccggctgtaatacc
acggtctggcagggcgccaagagccaagaagatttagtccacatcaccaacaatcacaat
gaagagacgaggaaacctaatcacagaacagaaactaaaggagggaaaggagctcatcat
tccggcacaaggaaaaaggagaaactgccgtcgagtcagagtgtccatgtcactggagtg
gtgccagagtctaaacctgccgtcaaaagaagccaaaagacgggaaagaaaccagctgga
aagagcggaaaagaggcgtcaaagaaaagtcacaagtccacagttcactcccaacccact
tccatgagcccacccatgggaccccactatctggacgtgccgtacagatcagataggagg
ccctaccttggcaagtcgtccaccctcccctctcaggagaacacaacgccaggccgctgc
acagacatggccagcctacccggtggtgcgacgcccacccacacctaccaccagcgctgg
agcaacccaggcgacagcagtccatcctgggggaccgtccaacacacctgtcgcaggccg
ctcacagagtaccgcatgtactctcatgacttcaccccagccaatgggaaggaatgggag
gaaacacaggagcaggcccaggattacagcttgaaacaggactgtaaaccccagattccc
ccaaaggtgtcacggtctgtcactgacttggatctgtcagaaccagaccgctccacgagc
ttcggcaggttcgagggtctcagacatcacttgtcacaggccaaaccagaggagaatggc
acaaacatggtcgtggaagaatgtgaaagttcagaccctaacaaagcagctggacttggg
aagaagatgaaggctatttcactaaccatgcgcagaaaaatgggcaaaaagcacgccaag
tatttctctgaggagccaggtgatgacacggataaagatccggaggcagaagcagagagc
agcactgcagctgagaaagactatgcaaagacaagtaactccttagagagtctgtacagc
ggccagagcacctccagtggtgtgaccagtgagtccaatggttctgctcagaaagacagt
gtgaggctggaggaggacgtatgctaccagggaccgttctgtggcagagctcgtgtccac
acagactttgttccaagcccttatgacacggattctctcaaactcaaggtgggtgacatc
atcaacatcatctgtaagcctccgatgggcatctggacgggcatgttgaacaacaaagtg
ggaaacttcaagttcatctacgtagacgttttagtggagaaagaggaggaggaagaagaa
gttccaaagatcagacagcagaagctctgcaaaagacctcgacctaaaacgttgctggag
ttactggagcgactgaatctggaggagtatgcctctgccttgctgctgaatggctaccag
acggtggaggacctgatgcacctgcaagagaaacacttgatagagctgaacgtcaacgac
cctgagcacagacacagacttctggctgctgctgagtgccgctacacagaaggtgatgat
gtcagggatgtggaggagcacaaatcctcccacagtcaaaaggaagaagacagtgactgt
cccagagactcgggctgcttcatcccgtcagaatgttcagacagcaaagaggacaccgag
ccactcacagacgctggggactcgtga
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