Hippoglossus stenolepis (Pacific halibut): 118106409
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Entry
118106409 CDS
T08308
Symbol
limk1a
Name
(RefSeq) LIM domain kinase 1a isoform X1
KO
K05743
LIM domain kinase 1 [EC:
2.7.11.1
]
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
118106409 (limk1a)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
hsp01001
]
118106409 (limk1a)
Enzymes [BR:
hsp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
118106409 (limk1a)
Protein kinases [BR:
hsp01001
]
Serine/threonine kinases: TKL group
LISK family [OT]
118106409 (limk1a)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Pkinase
LIM
PDZ
Kdo
PDZ_6
ABC1
PDZ_2
Haspin_kinase
RIO1
PDZ_4
Motif
Other DBs
NCBI-GeneID:
118106409
NCBI-ProteinID:
XP_035010808
LinkDB
All DBs
Position
4:13126893..13183228
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AA seq
678 aa
AA seq
DB search
MVEPAKQGGSVRLVELLNIRAADMSRSSDCQNKTLAPTADMSAKVQCNDRLQLSKCCECS
ASLSHWYYEKDGRLFCKKDYWARFGELCHGCNDPITTGLIMVAGEQKYHPECFTCLNCRA
FIGDGDTYALVERSKLYCGHCYYQTIVTPVSLPDSPCSRIPHTVTLVSIPATAESNNGRR
GRGFSVAIDQPLSPTNGYSPDHALTIRVSQVDPDCISPDVKKSIHVGDRILEINGTPIHN
VPLDEIDLLIQETSRLLQLTIEHDPHSQGLEGGSSGAEEHVDGPLSSPLSEGPSPVLPIT
QPPNPDISNLRSRIITRSCSIDKSPGSSNAASPNSQRKDINRSESLRVVSNRTHRVFRPS
DLIHGEVLGKGCFGQAIKVTHKETGEVMVMKELIRFDDETQRTFLKEVKVMRCLEHPNVL
KFIGVLYKDKRLNFIAEYIKGGTLREIIKKMDSNFPWSQRVSFGKDIAAGMTYLHSMNII
HRDLNSHNCLVRENNTVVVADFGLARLMIDDKHEEKFAQGKLPGLKRPDRRKRYTVVGNP
YWMAPEMIHGKSYDERVDIFSFGIMLCEVIGRVNADPDYLPRAMDFGLNVSGFLEHFCPP
DCPPAFFPLAAVCCDLDADKRPAFSKLGEWMDNLQMHLEMGLPLVSELDTLHKAFWENHS
MARPENGLHTHPEQPEQD
NT seq
2037 nt
NT seq
+upstream
nt +downstream
nt
atggttgagccagcgaagcagggagggagtgtgaggctggtcgagctgttgaacatcaga
gctgctgacatgagtcgttcctctgactgtcaaaacaagaccctcgctcccaccgctgac
atgtcagcaaaggtccagtgcaatgacagactgcaactctcaaaatgttgtgagtgcagc
gcctcgctgtcccactggtattatgagaaagatggacggcttttctgcaagaaggactac
tgggccaggtttggggagctgtgccacggctgcaatgatcccatcaccaccggcctcatc
atggtcgcaggggaacagaaatatcacccagaatgcttcacctgcctgaactgcagggca
ttcatcggtgatggggacacgtacgctctggtggagaggtccaagctctactgcggtcac
tgttactaccagaccatcgtcaccccggtgtcgctgccggactcgccatgctcacgaatc
cctcacacggtcacactggtgtccatcccagccaccgccgagagcaacaacggacgcagg
gggcgaggtttctctgtggccatcgatcagccactgagcccgaccaatggctacagccct
gatcatgcactcaccatcagagtctcccaggtggacccagactgcatcagtccagatgtg
aagaaatccattcatgttggagaccggatcctggaaatcaacgggacgcccattcacaat
gttcctctggacgagatcgacttgctgatccaggagacgagccggctgctgcagctcacc
atcgagcacgaccctcacagtcaggggctggagggaggctcctcaggggctgaagagcac
gtggacgggcccctgtccagccccttgtctgaggggcccagccccgtcctgcccatcacc
cagccccccaaccccgacatcagcaacctgagatcccgcatcatcacgcggagctgcagc
attgataaatcaccaggttccagtaatgcagcatcccccaactcccagaggaaggacatc
aatcgatcagagtcgctccgcgtcgtttcaaaccgaacgcaccgcgtcttccggccgtct
gacctcatccacggagaggtgctggggaagggctgcttcgggcaggccatcaaggtgacc
cacaaggagaccggggaggtgatggtgatgaaggagttgattcgctttgatgacgagaca
cagagaacattcctgaaagaggtgaaggtcatgcgttgcctggagcaccccaatgtgctc
aagttcatcggagtcctctacaaagacaagagactcaacttcatcgctgagtacatcaaa
ggaggcaccttgagggaaatcatcaagaaaatggacagcaactttccctggagccagcgg
gtcagttttggcaaggacatagctgctgggatgacatatctgcattccatgaacataatc
caccgggacctgaactcacacaactgtcttgtccgagagaacaacacagtggtggtggcc
gacttcgggctggcgcggctcatgatcgatgacaagcacgaggagaagtttgcgcagggt
aaactgccaggtctgaagaggcctgaccgcaggaagaggtacacggttgtgggaaacccc
tactggatggctcctgagatgatccatggaaagagctatgacgagagagtagacatcttt
tcctttggtatcatgctctgtgaggtaattggcagggtgaatgcagatccggactacctc
cccagggcgatggacttcggattgaacgtgtctggtttcttggagcacttctgtccccca
gattgtccccctgcttttttccccttggctgctgtgtgctgtgaccttgatgcagacaaa
cgtcctgctttttccaaactgggggagtggatggacaaccttcagatgcacttggaaatg
ggactacccctggtgtccgaactggacacgcttcacaaggccttctgggagaaccacagc
atggcgcgccccgaaaacggcctgcacacccaccctgaacagccggagcaggactga
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