Hippoglossus stenolepis (Pacific halibut): 118106425
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Entry
118106425 CDS
T08308
Symbol
agfg1a
Name
(RefSeq) arf-GAP domain and FG repeat-containing protein 1a isoform X1
KO
K15044
Arf-GAP domain and FG repeats-containing protein 1
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hsp03019
]
118106425 (agfg1a)
04131 Membrane trafficking [BR:
hsp04131
]
118106425 (agfg1a)
Messenger RNA biogenesis [BR:
hsp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
118106425 (agfg1a)
Membrane trafficking [BR:
hsp04131
]
Endocytosis
Clathrin-mediated endocytosis
Others
118106425 (agfg1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ArfGap
Motif
Other DBs
NCBI-GeneID:
118106425
NCBI-ProteinID:
XP_035010835
LinkDB
All DBs
Position
4:15364007..15387474
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AA seq
610 aa
AA seq
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MAASAKRKQEEKHLKMLREMTSLPPNRKCFDCDQRGPTYANMTVGSFVCTSCSGILRGLN
PPHRVKSISMTTFTQQEIEFLQKHGNEVCKQIWLGIFDDRISSVPDFREPQKVKEFLQDK
YEKKRWYVSAEQAKVVASVHASISGSSNSSTSSTPEVRPLKSLLGESAPSLHLNKNTPPN
QSPVVSRGQIHQQQFHDKKFDLLSDLGGDIFAAPPNMNAGASSSFANFAHFNSHTTAQNA
NANADFANFDAFGSTSATSGGFPSAPQAPFQPSNTAFTVLSSSRSMGEFATALPLQGAHS
SASGGLANANFAKFDNFHNSCSADFGAFSSSSQSNSTGAGKAAVQSTSIPADRYAVLADL
DNVFSSAITEQGGIPIVASSTTAAGVGGFPQKQPAVPTGGDRYAALAELDTVFGSPVPTT
SVYNTTTAHGSVFGSETGVSTAQAQQALPGMAHGFGAHPSTNPFVAAGVAPAGPPTNPFQ
SNGRVAHVAAAAGLMRVLHGQGYPPTFAAFGTGSMSMPSGFGNNAGFNLPTSFSGTFQQQ
FPGQAPFPQPPAYPQQPNGGGYHPAFGQAKPVGTPFGQAMAGPMVSSNPFLGAAPPAQYP
TGGSSTNPFL
NT seq
1833 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgagcgcgaagagaaaacaggaggagaaacacctgaagatgctgcgagagatg
acgagtttgccccccaacagaaagtgcttcgactgcgaccagcgcggcccgacctacgcc
aacatgaccgtgggctccttcgtgtgcacctcctgctccggcatcctacgaggactgaat
ccaccccacagagtcaagtccatctctatgacaaccttcacgcaacaggaaatcgagttc
ctacagaaacatgggaatgaggtatgtaaacagatctggctcggcatttttgatgacaga
atctcctcagtaccagacttcagagaaccacagaaagtcaaggagttccttcaagacaaa
tacgagaagaagcgatggtacgtatctgctgaacaagccaaagtagtggcatcagtccat
gcttccatctctggctcgtcaaacagcagcaccagcagcactccagaggttagaccactc
aaatccctgcttggggagtcggccccctccctacacctcaacaagaacaccccaccaaat
cagtctccagtggtgagccgtggacaaatccatcagcagcagttccatgacaagaagttt
gacctcctcagtgacttgggtggagacatcttcgctgccccgcctaacatgaacgcaggc
gccagctccagttttgccaactttgcacatttcaacagccacacaacagcacaaaatgcc
aacgcaaatgccgactttgcaaattttgatgcatttgggagcacttctgcgacatcaggt
ggtttcccctccgcaccccaagccccattccaaccctcaaatacagcattcactgtgctc
tcatccagccgcagtatgggtgagtttgccactgctctgcctctccagggtgcacacagt
agtgcttcagggggactagcaaatgccaattttgctaaatttgacaacttccacaattcg
tgtagtgctgactttggagccttcagttcctcttcccagagtaactcaacaggagctggc
aaagctgctgtacagagtactagcatccctgctgatagatacgcagtcctggctgacctg
gataacgtgtttagctctgccataacagagcaagggggtatcccgatagtggcaagctca
accacagcagctggagtggggggttttcctcagaagcagccagcggtgccaacagggggg
gatcgctatgctgctctcgctgagcttgatactgtctttggttccccagtccctaccacc
agtgtttacaacaccaccactgcacatgggagtgtgtttggctcagagactggggtgtca
acagcacaagcacagcaggccctgcctggcatggctcatggtttcggcgcacatccttca
actaatccgttcgtagctgctggagtggcccctgcgggacctcccaccaacccgttccag
agcaacggcagagtggctcatgtggcggcagcagcaggcttgatgagggttcttcatggg
cagggttacccccccacctttgcagcattcggcacaggctccatgagtatgccttctgga
tttgggaataatgcaggcttcaaccttcccaccagctttagtggaactttccagcaacaa
tttcctgggcaggctcccttccctcagcctcctgcatatccccaacaacccaacggtgga
ggatatcatccagcctttggccaggccaagcctgttgggactcctttcggtcaggctatg
gctggacctatggtctcaagcaaccctttcctgggcgcggctccacctgcacagtatcca
acaggaggctcctctacaaatcccttcttatag
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