Hippoglossus stenolepis (Pacific halibut): 118106474
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Entry
118106474 CDS
T08308
Symbol
pipox
Name
(RefSeq) peroxisomal sarcosine oxidase
KO
K00306
sarcosine oxidase / L-pipecolate oxidase [EC:
1.5.3.1
1.5.3.7
]
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp00260
Glycine, serine and threonine metabolism
hsp00310
Lysine degradation
hsp01100
Metabolic pathways
hsp04146
Peroxisome
Module
hsp_M00974
Betaine metabolism, animals, betaine => glycine
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
118106474 (pipox)
00310 Lysine degradation
118106474 (pipox)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
118106474 (pipox)
Enzymes [BR:
hsp01000
]
1. Oxidoreductases
1.5 Acting on the CH-NH group of donors
1.5.3 With oxygen as acceptor
1.5.3.1 sarcosine oxidase (formaldehyde-forming)
118106474 (pipox)
1.5.3.7 L-pipecolate oxidase
118106474 (pipox)
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Gene cluster
GFIT
Motif
Pfam:
DAO
GIDA
HI0933_like
Pyr_redox_2
NAD_binding_8
Thi4
Pyr_redox_3
FAD_binding_2
FAD_oxidored
Motif
Other DBs
NCBI-GeneID:
118106474
NCBI-ProteinID:
XP_035010939
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All DBs
Position
4:20079742..20106964
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AA seq
388 aa
AA seq
DB search
MSTTAEYDCIVIGAGVQGSFTAYQLAQNNQRTLLLEQFVLPHTRGSSHGQTRIIRKAYDQ
DFYTHMMEECYELWGQLEREAGVKLYRQTGLLLMGPENSANYQQFKSTLQKNKVPMVTLT
RDNFSQHIPHVNLAEGDGAVVDVTAGVLYADRALKTVQGQFQKLGGIIRDKEKVTDIEPG
PVVTVSTTAGVYRAKSVVITAGPWANRLLAHTGLQLPLEVVKINVCYWKEKVPGSYGVKQ
RFPCFLLTECEEAKEHIYGLPSNEYPGLMKISYHMGSETDPDQRDKQTDRSDIDILQRYI
ARCWPGLLPEPAVVESCMYTLTPDRHFVLDCHPTYSNIVIGAGFSGHGFKFGPIIGKLLC
ELSMGKVPSYDLSPFRIRRFQGKTKSAL
NT seq
1167 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaccacagctgagtatgactgtatagtgatcggggccggcgtccagggctcgttc
acggcctatcagctggctcaaaacaaccagaggactcttctgctggagcagttcgtcctg
ccccacaccagagggagctcccatggccagacccgcatcatccgcaaggcctacgatcag
gacttctacacccacatgatggaggagtgctacgagctgtggggtcagctggagagggag
gcaggcgtcaaactgtacagacaaacaggactcctgctgatgggaccagagaacagtgcg
aattaccagcagtttaagagcaccctgcagaaaaacaaggttcctatggtgaccctgacc
cgtgacaacttcagccagcacatcccccatgtcaacctggctgagggagatggagcggtg
gtggacgtcaccgctggagttctctacgctgaccgtgcactcaaaactgtacaggggcag
tttcagaagttgggtgggatcataagagacaaagagaaggtaacagacatcgagcctggg
cctgttgtcaccgtgtcaaccactgctggtgtttatcgagccaagagtgtggtgatcacc
gctggaccctgggctaatagactgctggcccacactggcttacagctgccactagaggtg
gtgaagatcaatgtgtgctactggaaagaaaaggttcctggatcatatggcgtgaagcag
cgctttccctgcttcctgctgactgagtgtgaggaggccaaagaacacatctatggcctc
ccctccaacgagtacccaggcctgatgaagatatcttaccacatgggcagcgaaacagac
ccagaccagagagacaagcagacggacaggtctgatattgacatcctccagcgctacatt
gcccgctgttggcctggcctgctccctgaacctgcagtggtggagagctgcatgtatacg
ctaacgcctgatcgtcattttgtgctggactgtcaccccacctacagtaacattgtgatt
ggagcaggattctcaggtcatggcttcaagtttggaccaatcatcggcaagctcctgtgt
gaactcagcatgggaaaggtgccctcctatgacctttcacctttccgaatcagacgcttc
caaggaaagaccaaatcagctttatag
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integrated database retrieval system
