Hippoglossus stenolepis (Pacific halibut): 118106544
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Entry
118106544 CDS
T08308
Symbol
cadm1b
Name
(RefSeq) cell adhesion molecule 1b isoform X1
KO
K06781
cell adhesion molecule 1
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
118106544 (cadm1b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
hsp04515
]
118106544 (cadm1b)
Cell adhesion molecules [BR:
hsp04515
]
Immunoglobulin superfamily
Nectin family
118106544 (cadm1b)
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
Ig_2
ig
C2-set_2
V-set
C1-set
C2-set_3
KOW2_Spt5
Syndecan
Flg_hook
Motif
Other DBs
NCBI-GeneID:
118106544
NCBI-ProteinID:
XP_035011072
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Position
4:8702949..8841727
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AA seq
420 aa
AA seq
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MAITGSGSLAVSLSVFVISLAFLPKGAAETVTVEGQNLATDNVSVIEGEMATISCRVMVN
DDSVIQLLNPNRQTIYFRDVRPLKDSRFQLVNFSDNELRVSLSNVSLSDEGRYVCQLYTD
PPQEAYADITVLVPPGNPIIESREDVVSEGNETELTCTAMGSKPAASIRWMKGEEELTGE
TTVEETYDRMFTVSSRVKISVTKEDDGVPVDCIIDHPAVKDLLAQRHLEVLYKPEVKIVV
TYPEGLTREGDNLDLTCIAGGKPHPHQINWLRVEEDVPSHAVVTGSDLYIENLNKSYNGT
YRCVASNTVGEAYDDYILYVYDAPTTIPTPTTNPVNTQDSRAGEGAPQKIDHAVIGGVVA
VVMFAILCALIVLGRYFARHKGTYFTHEAKGADDAADADTAIINAEGGHNNTDEKKEYYI
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atggcgatcacggggagcggatctctcgctgtttctctctcggttttcgtgatttcactc
gcgtttcttccgaaaggagctgctgaaaccgtgacagtcgaaggtcagaacctggcaacc
gacaacgtgtcggtgatcgagggggagatggccaccatcagctgcagagtgatggtcaac
gacgactccgtcatccagctgctcaaccccaacaggcagaccatctacttcagagacgtt
agacctctgaaggacagccggttccagctggtgaatttctctgacaacgaactgcgggtg
tctctgtccaatgtgtcactctccgatgagggacgctacgtgtgccagctctacacggat
cctcctcaggaagcctacgcagacatcactgtcctggtcccgccaggcaacccaatcatt
gagagccgcgaggatgtggtcagcgaggggaatgagacggagctcacctgcacagccatg
ggcagtaagccagctgcctccatcagatggatgaaaggggaggaagaactgacaggtgag
acaacagttgaggagacgtatgacaggatgtttaccgtcagcagccgggtaaaaatttct
gtcaccaaagaggatgatggagtaccagtggactgcatcattgaccacccagctgtgaag
gacctcctggctcaaagacacttggaagtgctatataaaccagaagtgaagattgtggtg
acatatcctgagggtttaaccagagaaggtgacaatctagacttgacgtgtatcgcaggg
ggaaaaccacacccccatcagatcaactggctccgggtggaggaggatgtgccgtctcac
gccgtggtcaccggctccgatctctacatcgagaacctcaacaagtcctacaacggcacc
tatcgctgcgtagcgtccaacacggtgggcgaggcctacgacgactacatcctctatgta
tatgatgctcccactactatccccacacccaccaccaacccagtcaacacgcaagactcc
agagccggtgagggggcaccgcagaaaattgaccatgctgtcattggaggagtggttgcc
gtggtgatgtttgccatcctctgtgcactcattgttcttggtcgatactttgccagacac
aaaggaacttacttcacgcacgaagccaaaggggcggacgacgcggccgacgcggacacg
gccatcatcaacgcggaggggggacacaacaacacagacgagaagaaggagtactatatc
taa
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