Hippoglossus stenolepis (Pacific halibut): 118106570
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Entry
118106570 CDS
T08308
Name
(RefSeq) Down syndrome cell adhesion molecule-like protein 1 homolog
KO
K06768
Down syndrome cell adhesion molecule-like protein 1
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
hsp04515
]
118106570
Cell adhesion molecules [BR:
hsp04515
]
Immunoglobulin superfamily
Other
118106570
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
Ig_2
fn3
ig
Ig_DSCAM-DSCAML_C
V-set
C2-set_2
Pur_ac_phosph_N
C1-set
Ig_6
V-set_CD47
fn3_2
ChitinaseA_N
Motif
Other DBs
NCBI-GeneID:
118106570
NCBI-ProteinID:
XP_035011125
LinkDB
All DBs
Position
4:complement(11597340..11695049)
Genome browser
AA seq
2089 aa
AA seq
DB search
MWLVTLLLLYSLQEVNSEDVVSTRLYFVNASLQRVTFSSSVGVSLPCPAGGAPHAVLRWY
LAAGDDIYDVPHIRHVHANGTLQLYSFSPSAYNSIIHDNEYFCTAENQAGKIRSPSIHIK
AVFREPYTVRVADQRSMRGNVAVFKCLIPSAVQEYVSVVSWEKDTVSIIPGNRFFLTSFG
AMYISEVQKEDALSTYRCITKHKYSGETRQSNGARLSVMDPTESTPSVLDSFQSGEVQVG
NSVELPCVASGYPNPTIRWLKDGRPLPADTRWTRRITGLTISDLRLEDSGNYICEVTNSF
GSKEVTGHLNVIEPLRVTLSPKNLKTGISSTVILSCAVQGSPHFIVSWYRNTEPVIPDQH
FSIQGAHNETLFISAAQKRHSGAYQCFATRKAQTAQDFSIILLEDGTPRIVASFSERVVV
PGEPFSLMCAAKGAPPPTITWTLDDEPVARDLSRVRASQYTLSDGSTVSHVNVSSPQIRD
GGVYRCAARNSAGSAEYQARINVRGPPRIRPMKNITAVAGRNSFINCRVIGYPYYSINWY
KEGLLLPDNHRQVVYENGTLKLSDVQKGMDEGAYVCSVLIQPQLFITQTVYITVKVPPLI
QPFDFPPTSIGKLMYIACVVSSGDMPIRIAWRKDGQEIVASSGITIDTKEFMSSLQISKV
SLKHNGNYTCIASNDAATVSTERQLTVTVPPRFVVQPNNQDGIYGKAGILNCSVDGYPPP
KVMWKHAKGTLAGIGNPQQYHPVPLTGRIQIMTNGSLLIRHVLEEDRGFYLCQASNGVGS
DISKSMVLTVKIPAMITSHPNTTMAKKGYVKELNCTARGEWPIIIRWERGDTVIDPDRNP
RYSITTSPNEKTDEVLSTLRLKPAEREDSVFFSCHAINSYGEGRGLIQLTVQEPPDPPEL
EVREVKDRSMNLRWTQRFDGNSIITSYDIEYKNKTDTWELKHATRNISPSNNQANIVDLH
PASVYSIRMYSYNAIGKSEASKELTISTEEAQPDGPPMEVILQPVTSQSIRVTWKAPRKE
LQNGVIRGYQIGYRENGPGSNGQYSIVEMKATGDSEVYTLDNLKKFAQYGVVVQAFNRAG
TGPSSSEINATTLEDVPSQPPQNVRAISVTSDEAVITWAEPPRLTLHGVLKGYRVVFWTV
FPDGEWGEMQNITTTREQVELRGLEKFTNYSIQVLAYTQAGDGVRSNVLYIQTREDYPGP
PAGIKAVPSSASSVVVSWLPPHKPNGIIRKYTIYCSSPGSGQPLPSEYEANPELLFYRIT
HLNHRQQYLIWAAAVTTAGRGNFSEKVTVEPAAKAPAKILSFGGTVTTPWMKEVRLPCSS
VGEPTPSIKWTKDSEDTAIPVSLDGQRLIMANGTLVLRSVKAEDSGYYTCTATNTLGFDT
IIVNLLVQVPPDQPRLTVSTTSTSSITLAWIPGDNGGSSIRGFVLQYSVDNTEEWKDVFI
SSSERSFKLDNLRCGTWYKVKLAAKNSVGAGRISEIIEAKTHGREPQFNKDQPVFTHINS
SHARLNLQGWASGGCPISAVTLEFRPKGTWSWQNVRTNATTDVFLAELREATWYELKMKA
CNSAGCGNQSSQFATLDYDGSTIPPIKSPLEKNDDVKKLFSIGCPVILVTVGVALLFIIR
RKRKEKRLKRLRDAKSLAEMLISKNNRSFDTPVKGPPQGPRLHIDIPRVQLLIEDKEGIK
QIGEDKATIPVTDTEFNQTNPQSFCTGVSVHHPALIQNTGPLIDMSDIRPGTNPVSRKSV
KSAHSIRNRYSSQWTLTKCQASTPARTLTSDWRTVGSQHGITVTESDSYSASLSQDTDKG
RNSMVSTESASSTYEELARAYEHAKLEEHLQHAKFEITECFISDSSSDQMTTGTNDNADS
MTSMSTPSEPGICRFTASPPKPQDYDRGKNVAVPIPHRAKSDYCNLPLYMKSDPFFRKQS
EHHDPCPVVPPREASIRGLAQRAYHTQGRHVTMDSAKQQALTMGHSGLSNLTSSGASSGG
ATGGCGGMSASSSSSTLPQRTLTMPGSSASVAQSAAAAAAATAAAAGASSGGCGAVGATG
GTPGGASSSSSKMGGSRDSLLESSSSGLGRLQKQRDGGAGAYSKSYTLV
NT seq
6270 nt
NT seq
+upstream
nt +downstream
nt
atgtggcttgtaactttacttctgctgtattctttgcaagaagtcaacagtgaggatgtt
gtctctacacggctgtactttgtgaacgcctccctgcagcgggtgaccttctccagctcg
gtgggggtgtccctgccctgccctgcgggcggcgccccccatgccgtcctgcgctggtac
ctggccgccggagacgacatttacgatgtgccccatatccgccacgtgcatgccaacggc
accctccagctctactccttctctccctccgcctataacagcattatccacgacaacgag
tacttctgcactgctgagaaccaggcaggaaagatccgaagccccagcatccacatcaaa
gcagtgttcagggagccctacacagtccgtgtggccgaccagcgctccatgcggggtaat
gttgctgtgttcaagtgcctcatcccctcagccgtccaggagtacgtcagtgtggtgtct
tgggagaaagatactgtctccatcatcccaggcaaccgtttcttcctgacctcatttggc
gctatgtatatctcagaggtgcagaaggaagatgctctgtccacctaccgctgcatcaca
aagcacaagtacagtggagagactcgccagagcaatggagccaggctctctgttatggac
cctacggagtccaccccgtcagtgctggacagtttccagtccggtgaggtgcaggtggga
aacagtgtggaactgccctgcgtcgcatcgggataccccaaccccaccatccgatggctg
aaggatggtcggccactccccgcagacacccgctggacacggcgcatcacgggcctcacc
atttcagacctgaggctcgaggacagtggcaactacatctgtgaggtcaccaacagcttt
ggttccaaagaggtgacaggtcatctcaatgtcatagagccactgcgggtcaccttgtct
cccaagaatctgaagacagggatcagcagcacagtcatactctcctgcgccgtccagggt
tccccccacttcattgtgtcctggtaccggaacacagaacccgtcatacccgatcagcac
ttttccatccagggagctcacaatgagacattgttcatttccgctgcacaaaagagacac
tcgggagcttaccagtgctttgctacacgcaaggcccagactgcccaggacttctccatc
atactactggaagatggcacaccccgtattgttgcctccttcagtgagagggtggtggtc
ccgggtgaaccgttctccttgatgtgcgccgccaagggagcacctcctccgaccatcacc
tggaccctggacgacgagcccgtggcccgagacctgtcgcgcgtcagggccagccagtac
acgctctccgacggcagcactgtcagccacgtcaacgtcagcagcccgcagattcgtgat
ggaggagtgtatcggtgcgccgcacgaaactcggccggtagcgccgagtaccaagcgcgc
ataaacgtaagaggtcccccaaggatacggcccatgaagaacatcacggcagtggccgga
agaaacagttttataaattgccgggtgattgggtatccttactactcaatcaactggtac
aaggagggacttctgctgcctgataaccatcgacaggtggtgtacgagaatgggaccctg
aagctcagcgatgttcagaaggggatggacgagggggcctacgtctgcagcgtgctcatc
cagccgcagctgttcatcacgcagactgtttatatcactgtcaaagttcctccactgatc
cagccatttgactttcctccgacttccatcggtaaattgatgtacatcgcctgcgtggtg
tcgtctggtgacatgcccattcgcatcgcgtggcgcaaggacgggcaggagatcgtagcc
tcctcgggcatcacgatcgacaccaaggagttcatgagttccctccagatctccaaggtg
tcgctcaagcacaacggcaactacacctgcatcgccagcaatgacgctgccactgtcagc
acagagaggcagctcacagtcactgtgcctcctcgatttgtggtgcagcccaacaaccag
gacgggatctatgggaaggcagggatcctgaactgttctgttgatggataccctcccccc
aaggtcatgtggaagcatgccaaaggaaccctagcagggatcgggaacccgcagcagtac
caccctgtgcctctgactggccgcatccagatcatgactaacggctcgctactcatcaga
cacgtcctggaagaggatcgcggcttctacctgtgtcaggcctccaacggcgtgggctcc
gacatcagcaagagcatggttctcaccgttaaaatcccggcgatgatcaccagtcacccc
aacaccaccatggcgaagaagggttacgtgaaggagctgaactgcaccgccaggggagag
tggcccatcatcatccgctgggagagaggcgacactgtcattgaccctgaccgcaacccc
cggtactccattaccaccagtcccaacgagaagaccgacgaggtgttgtctacactcagg
ctaaagccagccgagcgtgaggattcagtcttcttctcctgtcacgccatcaactcttac
ggagaaggacgaggccttatccagctcaccgtgcaagagcccccagaccctccggagctg
gaggtgcgagaagtgaaggatcgcagtatgaacctcaggtggacacagagatttgatggg
aacagcatcattacttcctatgatattgagtataagaacaagacagatacctgggagctg
aagcacgccactcgaaacatctcccccagcaacaatcaggccaacattgtggaccttcac
cccgcctccgtctacagcatccgcatgtactcctacaacgccatcggaaagagcgaggcc
agtaaggagctcaccatcagcacagaggaagcgcagccggatggtcctccaatggaagtg
atcctgcagcctgtgacctctcagagtatccgagtcacctggaaggctcccaggaaagag
ctgcagaacggcgtgatccgtggttaccagatcggttacagagagaacggccccggcagc
aacggccagtacagcatcgtggagatgaaggccactggagacagtgaggtctacacgctg
gacaatctgaagaagtttgctcagtatggcgtcgtcgtccaggccttcaacagagccggc
acagggccctcgagctccgagatcaatgccacgacattggaagatgtgcccagccagccg
cctcagaacgtgcgagccatttccgtaacatcagacgaggcagtgatcacatgggcggag
ccacccaggctgacgctgcacggcgtactgaagggataccgcgtcgtgttctggactgtt
ttcccggatggagagtggggcgaaatgcaaaacatcacaaccaccagggagcaggtggag
ctcaggggcctggagaagttcactaactacagcatccaggtgctggcctacacccaggct
ggggacggagtccggagcaacgtcctgtacatccaaacccgtgaagactaccctggaccc
ccagctggcatcaaagctgtgccctcctccgccagcagtgtggtggtgtcctggttgccc
ccccacaagcccaatggaatcatccgcaagtacaccatctactgctccagccctgggtca
ggccaaccgctgcccagcgagtatgaagccaatcccgagctgctgttctacagaatcacc
cacctcaaccaccggcagcagtacctgatctgggccgcagccgtcaccacggcaggccgg
ggaaacttcagcgagaaggtcacagtggagccagcggccaaggccccggctaagatcctg
tcatttgggggaaccgtgaccactccttggatgaaagaggtgcggctgccctgtagctca
gtgggagaaccaacaccatccataaagtggaccaaagacagtgaggacacagccatccca
gtgtctctagatggacagcgtctcattatggccaatgggacactagtgctgcgctctgtc
aaagctgaagattctggttactacacctgcacggccactaacacgctgggctttgacact
attatagtcaaccttttggttcaagtccctccagaccagcctcgtctaaccgtctccacc
acctccacctcctccatcactctggcctggataccaggagacaacggaggcagctctatc
agaggtttcgtgctgcagtactctgtggacaacacggaggaatggaaggatgttttcatc
agctccagtgagcgctccttcaaactggacaacctgcgctgtggcacctggtacaaagtg
aagctggcggccaagaacagtgtcggagccggacgcatcagtgagatcatcgaggcaaag
actcacggacgagaaccccagttcaacaaggatcagccggtgttcacccacatcaactcc
agccacgcccgcctcaacctgcagggctgggccagtggaggctgtccaatcagcgctgtc
acactggagttcagaccaaaaggaacgtggtcatggcagaatgtgcgcaccaatgccacc
acagacgtgttcctggccgagctgcgtgaggccacctggtacgagttgaagatgaaagcg
tgtaacagcgccggctgcggcaaccagagctcccaatttgcaacactggactatgatggc
agcacaatcccaccaatcaaatcccccctggaaaagaacgacgatgtcaagaagctgttt
tctattggctgccctgtaatcctggtcactgtgggtgttgcgctactcttcatcattcgc
aggaaacgcaaggaaaagcggctgaagagactaagagatgccaaaagcctggctgagatg
ctgatcagtaaaaacaaccgcagctttgacaccccagtgaagggcccccctcagggccca
cggttgcacatagacatccccagagtgcagctgctgattgaggacaaagaaggcatcaag
cagatcggtgaggacaaggccacgatccctgtgacagacacagagttcaaccaaacaaac
cctcagagcttctgcacaggtgtgtccgtccatcaccccgccctcatccagaacaccggc
cctttgattgacatgtcagacatcagaccaggaaccaacccagtgtcgaggaagagtgtc
aagtcggcccacagcatcaggaaccgctactccagtcagtggactctgaccaagtgccag
gcctccacgccagcacgcactctcacctcggactggcgcacagttggctcccagcatggc
atcactgtcacggagagtgacagctacagtgccagcctctcacaagacacagataagggt
cgcaacagcatggtgtcgacagagagcgcctcctccacctacgaggagctagcaagagca
tatgagcatgccaagctggaggaacacctgcaacatgccaaattcgagattacagaatgc
tttatctctgacagctcatctgaccagatgaccacaggtaccaacgacaacgcagacagc
atgacgtccatgagcacgccatcagagcctggtatctgccgtttcactgcctcgccacct
aaaccacaggactatgaccgtggcaagaatgtagctgtgcccattccacatcgcgccaag
agtgactactgcaacctccccctctacatgaagtcagatcccttcttccgaaagcagtcg
gagcatcatgacccatgtccagtggttccaccgcgtgaagcctctattcgtggcctggcc
caacgtgcataccacacccagggccgtcatgtgactatggactctgcaaagcagcaggcc
ctgaccatgggccactctggcctgtccaacctcacttcctctggggcttcctctggagga
gcaacaggaggttgtggggggatgtctgctagctctagcagctccacactcccccagagg
actctcaccatgcccggctcctctgcctcagtggcccagagtgcagcggcagctgctgct
gccactgccgcagccgctggggcatcatccggtggatgtggggcagtaggggccacagga
gggacccctggaggtgcctcctcatcctcctccaagatgggaggatccagagactctctc
ttggagagcagctcctcgggcttaggcagactacagaagcagagggatggaggggcaggg
gcctactccaagtcctacacactggtgtag
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integrated database retrieval system
