Hippoglossus stenolepis (Pacific halibut): 118106592
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Entry
118106592 CDS
T08308
Name
(RefSeq) CD166 antigen homolog A isoform X1
KO
K06547
activated leukocyte cell adhesion molecule
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp04514
Cell adhesion molecule (CAM) interaction
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
118106592
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
hsp04515
]
118106592
04090 CD molecules [BR:
hsp04090
]
118106592
Cell adhesion molecules [BR:
hsp04515
]
Immunoglobulin superfamily
Other
118106592
CD molecules [BR:
hsp04090
]
Proteins
118106592
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
Ig_2
ig
I-set
C2-set_2
V-set
C1-set
Ig_PDGFR_d4
Syndecan
DUF6377
Protocadherin
TMEM154
Ig_4
MHC2-interact
PTHB1_GAE
Motif
Other DBs
NCBI-GeneID:
118106592
NCBI-ProteinID:
XP_035011160
LinkDB
All DBs
Position
4:9193860..9233033
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AA seq
570 aa
AA seq
DB search
MHLLSASRVCALFITALLHRVSSLDTVIGQYGETLEIPCNNGAVKAEDVFITKWKYDKGD
GLAGDLLVKQKGQNTSIIATDDYKDRVNMAANCSLLLSEAKMTDQRTFTCMVVAGADITE
YPVNVLINKTPAELEISDKAEELEIGKLTKLAKCVAHDANPAAQIKWLKNNKPLEDDVKG
ISIQESVLVDPVTGLSTTSSVLEFSAEKEDTDAVFTCSTVNAMGVELVSSPVNFTITYTT
ENIVLKVIAQDPLVEGDNVTLKCIADGNPAPTSFNFHLKGEMVKVEDADTYTITNVSRDT
TGEYKCSLVNNPSLEASKEVIINYLDINLSPSGNIVQSADEALNLTLQIDASGEYMVSWT
KDNVKLNKEPKFTKLTYSDSGLYECKVKMGQLSQKASFELLVKGAPVIRQFSKQRSADGQ
HKVLICEAEGAPKPAVSWSINGTSPEESQFVNGKITHKITVVPSANLTVSCTVINEFGAD
TRSINVSSLFVEVRMDKQADQSEDSDQTKLVVGVVVGLLVATLVIGLAYLVYMKKSKQGS
WKTGEKEDGSSEEEKKLEEKVEENSQKAEV
NT seq
1713 nt
NT seq
+upstream
nt +downstream
nt
atgcacttgttgtccgccagccgcgtgtgcgccctcttcatcaccgcgctgctccaccga
gtcagcagtttggacactgttatcggccagtacggggaaacactcgaaatcccgtgcaac
aatggagccgtgaaagccgaggacgtcttcatcaccaaatggaaatacgacaaaggggat
ggacttgcaggagacctgctggtcaagcagaaaggccagaacacttcaatcatcgccact
gacgactacaaggaccgtgtgaacatggccgcaaactgcagcctcctgctctctgaggcc
aagatgaccgaccagcggaccttcacctgcatggtggtggctggtgccgacatcacagaa
taccctgtgaatgtgttgatcaacaagacgccagcagaactggagatttctgacaaggct
gaggaactggagattggcaaacttaccaagttagcaaaatgtgtcgctcacgatgccaat
ccagctgcacagattaaatggttaaagaacaacaaacccctggaggatgatgtgaaaggg
atttccatccaggagtcggtgctggtcgacccggttactggcctctcgaccacttcctcc
gtactggagttctcggctgaaaaggaagacacggacgctgtgttcacctgcagcactgtg
aacgccatgggtgtagagctggtgtcctctccggtgaacttcaccatcacctacaccaca
gagaacatcgtcctcaaggttattgctcaggaccctctcgtagaaggagacaatgtgact
ctgaagtgtattgcagatggtaacccggctcctaccagctttaacttccaccttaaggga
gaaatggtcaaagtggaagatgctgacacttacaccatcaccaacgtctcacgtgacacc
accggtgaatacaaatgctccctcgttaacaacccctcgctggaagcatctaaggaagtc
atcatcaactacctagacatcaatttaagcccctctgggaatatcgtccagagcgctgat
gaggccttaaatctaacgctccagattgatgcatccggagaatacatggtgtcctggaca
aaggataatgttaaactgaacaaagagcccaagtttaccaagctgacctactctgactca
ggcctctatgagtgcaaggtgaagatgggacaactgagccaaaaagcttcctttgagctg
cttgttaaaggtgctccagtgatccgacagttttccaagcagcgcagcgcagacggccag
cacaaggtcctgatttgtgaagctgaaggtgccccgaagccggccgtgtcctggagcatc
aacggcacctcgcccgaggagagtcaattcgtcaacggaaagattacacacaagatcaca
gttgtgccctctgcaaatctaactgtgtcttgtacagtgatcaatgagtttggcgcggat
accaggtctataaatgtgtcatccctatttgtggaggtgagaatggataaacaagcagat
cagtcggaggacagcgaccaaaccaagttggtggttggagtcgtagtcggtctcctcgtc
gccaccctcgttattggcctggcatacttggtgtacatgaagaaatccaagcagggcagc
tggaagaccggcgagaaggaggacggttcctctgaggaggagaaaaagctggaggagaaa
gtggaggagaacagccaaaaagctgaggtgtaa
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