Hippoglossus stenolepis (Pacific halibut): 118106594
Help
Entry
118106594 CDS
T08308
Name
(RefSeq) transient receptor potential cation channel subfamily V member 1-like
KO
K05222
transient receptor potential cation channel subfamily V member 1
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
118106594
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
hsp04040
]
118106594
Ion channels [BR:
hsp04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
118106594
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank
Ion_trans
Ank_5
Ank_3
Ank_4
Motif
Other DBs
NCBI-GeneID:
118106594
NCBI-ProteinID:
XP_035011167
LinkDB
All DBs
Position
4:complement(2082585..2089190)
Genome browser
AA seq
749 aa
AA seq
DB search
MEGGRTLDSEEPSKDQGEEEEEKEGSSLDWLMRKDHIEITPMDSNVLTSSVDNVCSLAFT
RERVFEAASQGDTAQLHGLLDYLRLHDLRLTSPDYTDETNGKTVLLKALLNLKDGKNDTV
EVLLDVAEKTGDLENLVNASYKDLCYKGQTPLHVAIERRSFDHVKLLVQKGADVQAKANG
KFFQRKAGLGFYFGELPLSLAACTNQPNIVSFLMENPFRRADLADKDSQGNTVFHTLVVI
ADNTTENTEMVARMYDEILVQHNKLEKTEKVKLEAIENNQGLTSLKLAAKLGKIGLFRHI
LQREFEDEEMRPLCRKLTEWVYGPVHSSLYDMTSIDTSEDNSVLEIVVFGSEIPNRPEML
QIEPLRSLLQDKWDRFASKLFLMNFLVYVMYVIIFTTVAYNRKVGQPPFPIENVPVDGLR
CTGEIFCVLGAVWFLYKAITIFRKNPPNFKALYTDGFSDILFFVQAILLLVCTVVYICGR
REYVGLLVLSLALAWINVLYYSRGSKQMGIYNVMMQRMILGDILIFLCVYGVLLFGFSAA
IVSLMDDTAHKNDSVPRGRSFDVETFTCKKPSYNDIRFTTLELFKFTIGMGDLEFTDHVQ
YKEIFYILLISYIVLTYILLLNMLIALMGNTVDRISKESENIWNLQRAFTILEMERTVPR
GLRSKLFTGETKMVCPRGQKDERRRFFRVEEMNWRQWRSHLGGIQEEDPGNDMMPPQPHN
PTPRNMWNLSPLLEKIRTKRRQPQNFSFP
NT seq
2250 nt
NT seq
+upstream
nt +downstream
nt
atggaaggtggacggacactggacagcgaggagccaagcaaagaccaaggggaggaggag
gaggagaaggaggggagcagtctggactggctcatgagaaaagaccacatagagattact
cctatggattccaacgttttaacgtctagtgttgacaacgtctgcagcctagcgttcacc
agggagcgagtgtttgaagcagcatctcagggggacacagctcagcttcacggcctgctc
gactacctgcgacttcatgatctacgacttacgagcccagattacacagatgaaacgaat
gggaagacggtgctcctgaaagctttgctgaatctaaaagatggaaaaaatgacactgtt
gaagttctgcttgacgtagcagagaaaactggagatttagaaaatttagtcaacgcgtct
tacaaagatctttgctacaaaggtcagacgccgctgcacgtcgccatcgaaagaagaagc
ttcgaccacgtgaagctgctcgtccagaaaggagcagacgtgcaggccaaagccaacggg
aagttcttccagcgcaaagcaggactgggcttttatttcggagaacttccactgtcgctg
gcggcctgcaccaaccagcccaacatcgtgtccttcctcatggagaacccgttcagaaga
gccgacctggccgacaaggactcccagggaaacaccgtcttccacaccttggtggtcata
gcggacaacaccacagaaaacacggagatggtcgcgaggatgtacgacgagatcctcgtt
cagcacaacaaactagagaaaacagaaaaagtgaagctggaggcgattgagaacaatcag
gggttgacgtctctgaagttagcggccaagctgggaaagatcgggctgttcagacacatt
ctgcagcgggagtttgaggatgaggagatgaggccgctgtgcaggaagttgacagaatgg
gtctacgggccggttcactcctcgctctacgacatgacttccatcgacaccagcgaagac
aactctgtgctggagatcgtcgtctttgggagtgaaattccgaatcgtcctgagatgctc
cagatcgaacctctccgcagtctcctccaggacaaatgggacagatttgcttctaaacta
ttcttgatgaatttcttggtgtatgtgatgtacgtgatcatcttcaccaccgtggcctac
aacagaaaggtcggacagccaccgttccccatcgagaacgtcccggtcgacggcctgcgc
tgcaccggggagatcttctgtgtcctcggagccgtgtggttcctctacaaagcgataacc
attttcaggaagaaccctccaaacttcaaggctctttacacagatggattctctgacatt
ctgtttttcgtgcaggcgattcttcttctcgtctgcacggtcgtgtacatctgtgggcgg
agggaatacgtgggcctcctcgtgctctcgctggctctggcctggatcaacgtcctttac
tactcaagaggctccaaacaaatggggatatacaatgtcatgatgcaaagaatgattctt
ggagacatcttaatctttctatgtgtctatggagtcttgctatttggattttctgcagcc
atcgtttctctcatggatgacactgctcataaaaacgattcagtgcctcgtggaaggagt
ttcgacgtcgagacgtttacgtgcaaaaagccgagttacaacgacatccgctttacaaca
ctggaactgttcaagttcactataggaatgggagatctggagttcaccgaccacgtccag
tataaagaaattttctacatcctgctcatctcgtacattgtcctgacttacatcctgctg
ctcaacatgctcatagcactgatgggcaacacagtggatagaatctccaaagaaagtgaa
aacatctggaacctgcagagagcatttacgattttggagatggagcgaactgtgccgagg
ggcctgaggagcaaactgttcaccggagagacgaagatggtttgtccgagaggccagaag
gacgagcgtcgcagatttttcagggtggaggaaatgaactggagacagtggaggtcgcat
ctcggtgggatccaagaggaagacccaggaaatgacatgatgccgccgcagcctcacaac
ccgacacctcggaacatgtggaacctgagtccactgttggagaagattcgtaccaaacgt
cgccagccacagaatttcagctttccctaa
DBGET
integrated database retrieval system
