Hippoglossus stenolepis (Pacific halibut): 118106597
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Entry
118106597 CDS
T08308
Symbol
zgc:114130
Name
(RefSeq) mRNA decay activator protein ZFP36L1
KO
K18753
butyrate response factor
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09140 Cellular Processes
09143 Cell growth and death
04218 Cellular senescence
118106597 (zgc:114130)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hsp03019
]
118106597 (zgc:114130)
Messenger RNA biogenesis [BR:
hsp03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
118106597 (zgc:114130)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-CCCH
zf-CCCH_DUS3L
zf_CCCH_4
zf-CCCH_UNK
zf-CCCH_4
zf-CCCH_2
zf-CCCH_UNK-like_4th
zf-CCCH_9
Torus
zf-CCCH_PAN3
Zn_finger_prot
Motif
Other DBs
NCBI-GeneID:
118106597
NCBI-ProteinID:
XP_035011169
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All DBs
Position
4:complement(17665294..17669964)
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AA seq
433 aa
AA seq
DB search
MPSFPKLDQLSDLEQMMCKQLLSLDLMEPNRPPPSLSLEMRTPGYIGQPRSNTSFSLSSL
SSPTDPSESVFLPSSQWGQQSESPPPSQIANSSQWGKSAFLALRSVSMVETSSTTAASLG
WPGTDFQHSQSDSPTALSTSSSLSTSSLSTSSSSSRYKTELCRSFTESGLCKYGGKCQFA
HGQDELRDLNRHPKYKTEPCRTFHTIGFCPYGIRCHFVHNGEEEGEQSFSRSSSSSSSSI
PQQPLSSSRTHRPPLVRQSFSFAGFPSPQQALQHTLTDHPPLAAASFRPAPSASPPSCAD
ITDLLCHAFLEMDSAFEASPADKFQTLMGPAITADPQSPFLPSPDSGCSPCGLSPTGSPS
LRQSPGAPGVFSRPLGARSLSYTSLSDQDQDGSSSASSLSGSESSSGNNESNARRLAVFS
QLSVPDDPAVVCL
NT seq
1302 nt
NT seq
+upstream
nt +downstream
nt
atgccatctttccccaaactcgaccagctgtccgacctggagcagatgatgtgcaagcag
ttactcagtctcgacctgatggagcccaacaggccgccaccgtccctcagtctggagatg
agaacaccgggttacatcggtcagccccgcagcaacacgtcgttttccctctcgtctctc
tcctctcccactgatccttcagagagtgtatttctgccctccagccaatgggggcagcag
tcagaaagcccaccgccctcccagattgctaattcctcccagtgggggaagtcggccttc
cttgccctgcgctctgtcagcatggtggagaccagcagcaccacagcagcaagtctaggc
tggcccgggacagacttccagcactcccaaagtgacagccccactgcactgagcactagc
tcctccctgtccacgtcatctctctccacttcctcttcctcctcacgctataagactgaa
ctgtgtcgctctttcacagagagcggattgtgcaagtatggtggcaagtgccagtttgcc
catgggcaagatgagctgcgagatctcaacagacatccaaaatacaaaactgagccatgt
cgtacgtttcacaccatcggcttctgcccctacgggatccgctgccactttgtccacaac
ggtgaggaagaaggggagcagtccttctctcgttcgtcctcttcctcctcctcaagcatt
ccccagcagccacttagctcctcccgcacgcacagaccccctctggtgagacagagcttc
agctttgctgggtttccctctccccagcaagcccttcagcacactctcactgatcatccc
cctttggccgccgcctctttcagacctgctccctcggcgtctcctccttcctgtgccgat
attactgacctcctctgccacgccttcctggagatggactctgcctttgaggcttcacct
gctgacaagttccaaaccctcatgggcccagccatcacagcagatccccagtctccattc
ctgccttccccagactccggctgctctccctgtgggctctctccaactggctccccttcc
ctgaggcagagtcccggcgctcctggggtcttttcacgcccactgggcgcccgctccctg
tcctacacctctctgtctgaccaggaccaagatgggagcagctctgctagctcgctcagc
ggctctgaatccagcagtggcaacaacgaaagcaatgcccgacgtctggcagtattcagt
cagctctctgtgcctgatgatcctgctgtggtctgcctttag
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