Hippoglossus stenolepis (Pacific halibut): 118106622
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Entry
118106622 CDS
T08308
Symbol
rhbdd1
Name
(RefSeq) rhomboid-related protein 4
KO
K09651
rhomboid-related protein 4 [EC:
3.4.21.105
]
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
hsp01002
]
118106622 (rhbdd1)
Enzymes [BR:
hsp01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.21 Serine endopeptidases
3.4.21.105 rhomboid protease
118106622 (rhbdd1)
Peptidases and inhibitors [BR:
hsp01002
]
Serine peptidases
Family S54: Rhomboid family
118106622 (rhbdd1)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rhomboid
UIM_2
Motif
Other DBs
NCBI-GeneID:
118106622
NCBI-ProteinID:
XP_035011211
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All DBs
Position
4:3065948..3071117
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AA seq
321 aa
AA seq
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MRGRHRGSHMGLLLLASQVFQVGLDNIPPVTLGVLALNVYLFLFPAAPLMQTCVSVQQAY
WLKDWRRLLLSPLHHVDDWHLYFNMASFLWKGKMLEQRLGGAWFLYLLSVFSLLTGFVYL
ALEAALTELTQDQSYSLTCAVGFSGVLFALKVLCNHYHPGGVTHVMGIPVANRYASWAEL
VIIHMTSPGTSFVGHLSGILVGLLYTSGPLKTIMRKCAEFVSMNGHNSRSRGYYNSSGSS
GHSGSDGSSGYRQQAPDDTSTHQAPYTGGLTEEEQLQAAIRNSLNEGGESRQRGAPPPYG
FNAAEEEAEEIRRRRLRRFDR
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
atgcggggccgacacagggggtcccacatggggttgttgctcctggcctcccaggtgttt
caggtgggtctggacaacatcccacccgtcaccctgggtgtcctggctctcaacgtgtac
ctgttcctgttccctgcagctccactgatgcagacctgtgtgagtgtgcagcaggcgtac
tggttgaaggactggcgtcgtctcctgctgtcgccgctgcaccacgtggacgattggcat
ctctacttcaacatggcgtcgttcctctggaaaggaaaaatgctggagcagcggctgggc
ggagcctggttcctctacctgctgtcggtcttctctctgctcactggattcgtctacttg
gcgttggaggcagcgttaacagagctcacccaggaccagtcgtacagcttgacctgcgcg
gtcggcttctcaggtgtcctgtttgctctgaaggtgctctgtaaccattaccaccctgga
ggtgtgacccatgtgatgggtatccccgtggcaaaccgctatgctagctgggcagagcta
gtgataatccacatgacatcacctgggacctcgttcgttggtcacctgtcagggatcctg
gtgggtctgctctacacctctggaccactgaagaccatcatgaggaaatgtgcagagttt
gtgtcaatgaatggacacaactccaggtccagaggatactacaactcttcaggctcctca
ggccacagtggcagtgatggatcctcaggatatcgtcagcaggcaccagatgacacatcc
actcatcaagcaccttatacaggtggcctgacggaggaggagcagttgcaggcggcgatc
aggaacagtctgaatgaaggaggagaaagccgccagagaggagctcctcctccgtatgga
ttcaacgccgcggaggaggaggcggaggaaatccgacggaggagactgaggaggtttgac
cgatga
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