Hippoglossus stenolepis (Pacific halibut): 118106650
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Entry
118106650 CDS
T08308
Symbol
vps26a
Name
(RefSeq) vacuolar protein sorting-associated protein 26A
KO
K18466
vacuolar protein sorting-associated protein 26A/B
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp04142
Lysosome biogenesis
hsp04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
118106650 (vps26a)
04142 Lysosome biogenesis
118106650 (vps26a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hsp04131
]
118106650 (vps26a)
Membrane trafficking [BR:
hsp04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Retromer subcomplex
118106650 (vps26a)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps26
Motif
Other DBs
NCBI-GeneID:
118106650
NCBI-ProteinID:
XP_035011246
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All DBs
Position
1:17979898..17987403
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AA seq
328 aa
AA seq
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MSFLGGLFGPVCEIDVLLNDAENRKTAELKTEDGKVEKHYLFYDGESVSGKVNLNVRQGG
KRLEHQGIRIEFVGQIELFSDKSNTHEFVDLVKELALPGELAQNRSYDFEFMQVEKPYES
YTGANVRLRYFLRVTIVRRLSDLVKEYELIVHQLATYPDVNNSIKMEVGIEDCLHIEFEY
NKSKYHLKDVIVGKIYFLLVRIKIQHMELQLIKKEMTGIGPSTTTETETVAKYEIMDGAP
VKGESIPIRLFLAGYDLTATMRDVNKKFSVRYFLNLVLVDEEDRRYFKQQEIVLWRKAPE
KMRKRNFHQRYESPEPRTQPVNAEQPEM
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atgagtttcctgggaggtttgtttgggccggtgtgtgagatagatgtgctgctgaacgat
gctgagaacagaaagactgctgagttgaagacagaagatgggaaagtggagaaacactac
ctgttctacgatggagagtctgtgtctgggaaggtgaatctaaatgtgaggcagggagga
aagcgactcgagcaccagggcatccgcatcgagtttgtcggacagatagagctcttctct
gataagagcaacacccatgaatttgtggacctggtgaaagagttagcgctgcccggagaa
ctcgctcagaacagaagctacgactttgagttcatgcaggtggagaagccctacgagtcc
tacacgggagcgaatgtccggctaaggtatttcctcagggtgacaatagttcgtcgtctg
tctgacttagtgaaggaatacgagttaattgtccaccagttagccacgtacccagatgtc
aacaactcaatcaagatggaggtcggcattgaagactgtcttcacatcgagttcgagtac
aataaatccaaataccacctcaaggacgtgattgttgggaagatctacttcctgctggtc
aggatcaagatccaacacatggagctgcagctcatcaagaaggagatgacaggcattggt
cccagtactacgaccgagacggagactgttgcaaagtatgaaatcatggatggagctcca
gttaaaggggaatcaatccccatcagactgttcctggcaggttatgacttgacagccacc
atgagggacgtcaacaagaagttctctgtgcgctacttccttaatctggtgctggtggac
gaagaggatagaagatactttaaacaacaggagatcgttttgtggagaaaagccccagag
aagatgaggaaaagaaacttccatcagcgctatgagtcgcccgagccccgaacccagccg
gttaatgcagagcagccagagatgtga
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