KEGG   Hippoglossus stenolepis (Pacific halibut): 118106665
Entry
118106665         CDS       T08308                                 
Symbol
atm
Name
(RefSeq) serine-protein kinase ATM
  KO
K04728  serine-protein kinase ATM [EC:2.7.11.1]
Organism
hsp  Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp03440  Homologous recombination
hsp04068  FoxO signaling pathway
hsp04110  Cell cycle
hsp04115  p53 signaling pathway
hsp04210  Apoptosis
hsp04218  Cellular senescence
Brite
KEGG Orthology (KO) [BR:hsp00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    118106665 (atm)
 09130 Environmental Information Processing
  09132 Signal transduction
   04068 FoxO signaling pathway
    118106665 (atm)
 09140 Cellular Processes
  09143 Cell growth and death
   04110 Cell cycle
    118106665 (atm)
   04210 Apoptosis
    118106665 (atm)
   04115 p53 signaling pathway
    118106665 (atm)
   04218 Cellular senescence
    118106665 (atm)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01001 Protein kinases [BR:hsp01001]
    118106665 (atm)
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:hsp03032]
    118106665 (atm)
   03036 Chromosome and associated proteins [BR:hsp03036]
    118106665 (atm)
   03400 DNA repair and recombination proteins [BR:hsp03400]
    118106665 (atm)
Enzymes [BR:hsp01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.11  Protein-serine/threonine kinases
    2.7.11.1  non-specific serine/threonine protein kinase
     118106665 (atm)
Protein kinases [BR:hsp01001]
 Serine/threonine kinases: Other
  PIKK family [OT]
   118106665 (atm)
DNA replication proteins [BR:hsp03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Other termination factors
    118106665 (atm)
Chromosome and associated proteins [BR:hsp03036]
 Eukaryotic type
  Meiosis-specific proteins
   DSB formation-related proteins
    118106665 (atm)
DNA repair and recombination proteins [BR:hsp03400]
 Eukaryotic type
  Check point factors
   Other check point factors
    118106665 (atm)
SSDB
Motif
Pfam: PI3_PI4_kinase FAT TAN FATC HEAT_ATR GIP1_N DUF3349
Other DBs
NCBI-GeneID: 118106665
NCBI-ProteinID: XP_035011267
LinkDB
Position
4:complement(13679302..13710265)
AA seq 3086 aa
MSLSLDDLLVCCKGLENDKVTERKKEAERFRRLLRSPEIVQELDRTSATKSSKQLTWDAV
FRFLQRYVQKETESMQSSKSVSATTLATRKKKMAEMCSLIKYFIRYANKRGPRLKCSELL
RHVMEVVQGSYSCAAYGEDYSSLLVKDILSVRKYWCDIPPQQWHSLLELYCGLFNTSSKS
INLVLVNRVIHMVVQGCCTQTDGCNNTLFSFFSKALLNVRQEKPLAVLEHLVSALNIFLR
YSAMNCRMRVCNLGEELLPSILYIWADMRPSASLKEEILEFFNLQMCVHHPKGAKTQDTG
AHAEDWTRWRSQLYNLYDALVSEISHLGSRGKYVTGARHIAVKNNVIELTADICHQLFSD
NNDTHILEVTQASFRATPMASPTHGAASKRRRIELGWEVLREHLQPQHSDFDAIPWLQIT
AVLTSKYPSMVPRQELVPLLSVLYQLLAEQRRGERGLYVLRCLREVARCQTRYPERAQVH
RAELGRLWGRVWALALRGVSSPQTEAFSLDLLASIVHGQLINMDREFWKLFSASACKLSQ
SAAVCLCQALLKCPVPKALTLRTGWDNVGITEGSGSPNLKENLIAWLLMSDQSDEMEESS
RPHPIICRDFPYNLIADILISLTLKDTRAGLNFLLGAKGAESVFVQEQSSFAAKDNLEEI
ERLYLQFSFNMLPSEVRVTEESLTTSSADGQFTAVPSLRNKLEQSLLCVADTLLNCYSPD
SQSTPPECLVRCVILLTGVLEAYVSTGVLTEEDVCHSQLLSKAKAVTQDFTGFVSSVKVK
MTEEGTMTALRSVMKLCTQSASRKNTNKVGPISSSLFILTLPASLLNELAVICKMLLSSV
SKRVSVLEEDNHGDDDWEVTRTQQGDDIDLFEDGEESHSSTNGTQRQKGDSTDASCGPGA
KSLLAEDHLAQQDMALLAILEFLCECGSVQHVHGLLFKPQEVRRRLLLLLEQIDFSKPLH
LNMYLVLLKNLPAEDSLSPEEFDLLLRPLADLCSRYRQDPEICAAVLLGLLPSIRSLGRT
HHIPEEMKHVQGSLLQVLSGFCFLSQTGKCIATVRAALVQCLVALLEADPSCKWAVLSIG
GEERPVSIILPSHLADTHHQVRMLVAMSVERLFLDMRPEHPDKRKMLPLKQQQAAFENIY
LKAQEGMKLPRCSSSEDKKDEAFNRKATLLKSLSGVLCCSPVCEKQCLFALFQSYKENNI
EEQLIKKMLCSVSRALGYRSVKTFVTSHLYYLVAEWLAQRESDDRYTLGSFPYALLDHDA
IKDFYSSTYQVLVPHLVFLDDFEQVRSIGRYLEKDWKELLADCFPKIMVNILPYFVSIGQ
DTQVAQQKETAHRVYNLLKDDNCLGKQQIDSLIHTNLADIVVELLMTLYEGGGAEGDRGE
LKCFIGELDPVPNPPYFSSCVIKATLDYLSKCHSASHKSLVAILSKTPISIQRILLAVCE
RAAETTNVYERHRILLMYHLFVNLLLNEVKDGLGGAWAFVLRDIIYTLIHQINSRPVQCN
EVSARSLSLCCDLLTSLCQAALQFCDDALDCHLQVIVGTLTAQVISRPTISQQVLSLLQF
LVIQNQQKLKGAIGRLQPFPDLPEFKELRSVQHRLKYNTGTFTLRQEITHFLSVTSCDSL
PRTRLEGLKELTRQLHDKKEQIKDLLKECHADPSDSVLVKLVLSLLQLCKLAANQSGGAD
ILEAAGSCLGELGPVDFSTIALLHGRDPLFEKAMSLFTSTESQRLYIILNCMNDALTQQR
IEVKRAAAQCVKNILTTQSGVDFWEQHKDNRDPMLAYLNPFRKAKSKVVSVSAAESLESR
EKLESQECWIPQAGGHKAWLKALCTALLDSGGVKSEALLLSRPLCLVKVDCCQRLLPLII
HSILLDDSDGSWRKLLSLHIQDFFSFCSRSAQAASRSATPLNSDSESDTASRGLYDKTSL
RTMLAVIDYLRHQQRPLESQSNSCGTVCNSNFWLELNYLEVAKAAQSCAAHFTALLYTEI
YVDKVKACMEESRRTRSRATYKLSFEEQSQNFTISSLTEKSMEDTNISLQELLIEVYRSI
GEPDSLYGCGGETNTSPLTRIRTYEHEAMWGKALTSYDLHSSLPETTRQVGILEGLQNFG
LSSILTTYMRGLESEGVEWGAELRELRFQAAWRNTQWDCELSERSEESAPGFHESVFSSL
QALRDKEFSLFDETLKQARGAEVDELCRGSLEAVSSLYPALRNLQSIRELESVKQLFLRT
FSDVTLRDVCSQWRQHSQLLADSDFALVEPILTVRSVAQHTLMSRTGDPESTEYLSSVLT
DHLMELCQLARKAGNTQRAERAVFQMKPHDGVGSWTSLPVLSWQLEEAQVFWAKGEQGLA
LGLLRQMIHNLEEKVDLNPALAPVFTQCLRLCGNWLAETCLESPGVILEKYLERAVEVIE
GESGVQDSRLQSQRTEAFLSLARFSDAQYQSINKYMTSSEFENKQALLEKAKQEVDLMKE
RKVTSNRYTTKVQRELSLDVKALSNLKADRQRFLCKAVENYIQCLKQGEEHDTWVFRLAS
LWLENDDVSAVNDMMKKGVKQIPSYKFLPLMYQLAARMGTKVATSITEDTGFHDVLTDLI
CRASLEHPHHTLFIIFALVNANKDEHFCRPRQSRNAPRQTPPLDVERSDVALKIIHAIRK
KRGEMIRGIERLCDAYITLAYMDASKHKNEKKAIPIPADQPIMQIKDLDEVVIPTMEIKV
DPTGCYDNLVTIRSFTPHYHLAGGVNLPKIIDCVGSDGKSRRQLVKGKDDLRQDAVMQQV
FSMCSMLLQRNSDTRKRKLNIRRYKVVPFSQCSGVLEWCSGTVPIAEFLVDLNKGAHKRF
QPRDWNNLTCRETMMAAQRLGFDEKLQAFTEVCKNFRPVFRYFCMERFLDPADWMEKRLA
YTRSVATSSIVGYFVGLGDRHNNNILIDEQTAELVHIDLGVAFEQGKILPTPETVPFRLT
RDIVDGMGITGVEGVFRRCCEKTIEVMRSSQEALVTIVQVLLYDPLFDWTMNPLKAFYLQ
HDEQQELNATLTSTMGGDDIDNHRKSSDSQSFNKVAERVLLRLQEKLKGVEEGTVLTVGG
QVNLLIQQAMDPKNLSRLFPGWQAWV
NT seq 9261 nt   +upstreamnt  +downstreamnt
atgagtctgtcccttgatgatctcctggtctgctgcaaggggctggagaatgataaagtc
acagagagaaagaaagaagccgaacgcttcagacggctcctccgatctccagagatcgtg
caggagttggatcgcacctcggcaaccaaatcctccaagcagctcacatgggatgctgtt
ttcagatttctgcagcgctatgtccagaaggagacagagagcatgcagtcaagtaaatct
gtctcagcgacaacactcgccacacggaagaagaagatggcggaaatgtgcagtctgatc
aaatacttcattcgctatgctaacaaacgcgggcctcgtctaaagtgcagtgaactgctg
agacatgtgatggaggtggtgcagggctcttacagctgcgctgcgtatggagaagattat
agcagcctcctcgtgaaggacatcctctctgtccgcaagtactggtgtgacatcccccca
cagcagtggcacagtcttttggagttgtactgtggcttgttcaacacttcttccaaatcc
ataaaccttgttttagtgaacagagtcatccacatggtggtgcagggctgctgcacgcag
actgatgggtgtaacaataccctgttcagcttcttctccaaagcactgcttaacgtcagg
caggagaaacccttggccgttttggagcacctcgtctcggctctcaacatattcttgagg
tactcggctatgaactgcaggatgagggtgtgtaacctgggagaggagcttctgccatcc
atactgtacatctgggcagatatgaggcccagtgcttctctcaaagaggagatcttggag
ttcttcaatctgcagatgtgtgttcatcaccccaaaggagccaagactcaggacacaggt
gcacatgctgaggactggactcggtggcggagtcagctctacaatttgtatgatgctttg
gtcagtgaaatcagtcatctcggcagcagagggaagtacgtcacaggggcaagacacatc
gcagtgaaaaacaatgtcatcgagctcacagctgacatctgtcatcagttgttcagtgat
aacaatgacacccacatcttggaggtgacccaggcctccttcagagccacaccgatggcc
agtcccacccacggagcagccagcaagcgccgccgtattgagcttggctgggaggtcctc
cgagaacatcttcagcctcagcacagtgactttgatgccataccatggctacagatcact
gcggtgctcacttccaagtacccgtccatggtgccccgccaggagctggtgcctctgctc
tctgtgttgtaccagctcctggcagagcagcggagaggagagagggggctgtacgtgttg
cgctgtctgagggaggtagcccggtgccagacccgctatcctgagagggcccaggtccac
agggcagagttgggaaggctgtggggtcgggtgtgggcccttgcactacggggggtcagc
tcgcctcagacagaggcctttagcctggacctgctggcctccatcgtccacggacaacta
attaatatggacagagagttctggaagcttttctctgcatcagcatgcaaactatcgcag
agtgctgctgtatgtctgtgtcaggctctactgaagtgtccggtccctaaggctctcaca
ctgaggacaggctgggacaatgtagggatcacagaaggatctggttctccaaacctgaag
gagaacctcattgcatggctgctgatgagtgaccagagtgatgagatggaagaaagctcc
agacctcaccccatcatttgcagagactttccctacaatctaatagcggacatcctgatc
tccctgaccttgaaagacaccagagctggccttaactttctgctgggtgctaaaggggct
gagagtgtttttgttcaagagcaatcctcatttgctgccaaagacaacctggaagagatc
gagaggctttacttgcagttcagcttcaacatgcttccctcagaagtccgagtgaccgaa
gagtccctgacgacgtcatcagctgacggccagttcactgctgtccctagtctcaggaac
aagctggagcagtccctgctttgtgtggccgacacactactcaactgctactctcctgat
tctcagtccacacctccagagtgtctggtgcgctgcgtcattctgctgactggtgtttta
gaagcttacgtctccactggggttctgactgaagaggatgtctgccactcacaactcctc
agcaaggcaaaggctgtgactcaggacttcactgggtttgtttcaagtgtgaaggtaaag
atgacagaggaggggaccatgaccgctctaaggtccgtcatgaagctgtgcacacagtca
gccagcagaaaaaacacgaataaagttggtcccatctcctccagcctgttcattttgaca
ctgccggccagtctactcaatgaattagcagtgatctgcaaaatgttgctaagcagtgtt
tctaagagagtcagtgttttggaggaagacaatcacggggatgatgactgggaggtgacc
aggactcaacaaggggacgatattgacttgtttgaggatggtgaggagtctcacagcagc
accaatgggacccaaagacagaagggagacagcactgacgcttcttgtgggccaggagct
aaaagcctgttagcagaggatcatctggcccagcaggacatggctctcctcgccatcttg
gagttcctgtgtgaatgcgggtctgtccagcacgtccacggcctgcttttcaaaccccag
gaggtgcggcgcaggctgctgctgctgctggaacagattgacttcagcaaaccgctgcac
ctcaacatgtatcttgttctgctcaagaatcttccggctgaggactcgctctctccagag
gaatttgatttgctgctgcgtccgctggcagatttgtgtagtcggtaccgtcaggaccca
gagatctgtgctgctgtgctgcttggtttgttaccctccatcaggagcctggggagaacc
caccacatcccagaggaaatgaaacatgttcagggatccctgctccaagtgctgtctgga
ttctgtttcctgagccaaacggggaaatgcatagcaactgtgcgagctgctttagtgcag
tgtctggttgctttactggaggctgacccctcttgtaagtgggcagtcctaagtattgga
ggggaggagcgtccagtgtccatcatcctcccatctcacctcgcagatacccatcaccaa
gtccgcatgctggtagccatgtcagtggagaggttgtttctggacatgagaccagagcat
cctgataaaaggaagatgctgccactcaaacaacagcaggctgcttttgaaaatatttac
ctgaaggctcaggagggaatgaagcttccaagatgcagctcttcagaggacaagaaggat
gaggcgttcaaccgcaaggccaccctgttgaagagtttgtctggggtgctgtgctgtagt
ccggtgtgtgaaaaacagtgtctgtttgccctgttccagtcctacaaggagaacaacatc
gaggagcagctcatcaaaaagatgttgtgcagtgtatccagagcactgggttacaggagt
gtgaagaccttcgtcacttctcacttgtattacttggtggcggagtggctcgcacagaga
gagtctgacgatcgatacactctcggctctttcccctacgcactccttgaccatgacgcc
atcaaagatttctatagctctacttaccaggtattggtcccccacctggtcttcctcgat
gactttgagcaggtgaggtcgatcggtaggtatctggagaaggactggaaggagctgttg
gccgactgcttccccaagatcatggtcaacatcctgccgtacttcgtttctattggccag
gacacgcaggttgcacagcagaaagagacggcccacagagtgtacaatctgctcaaagat
gacaactgtctgggcaaacagcaaattgacagccttatccacactaacctggcggacata
gtggtggagttgctgatgactctgtatgaaggaggtggagctgaaggagacagaggagag
ctgaaatgctttataggggaactagaccctgtacccaacccaccgtacttcagctcctgt
gtcatcaaagctactctggactacctgagcaagtgccacagtgccagccacaagtcactg
gtagccattctgtcaaaaactcccatttcaattcaaaggatcctgctggcggtgtgtgaa
agagcagcagagacgaccaacgtctatgaacgtcatcgtatcctcctcatgtatcacctg
ttcgtcaacctgctgctcaacgaggtgaaggacggtctgggaggagcctgggcctttgtg
ctcagagacataatctacacacttatacaccagatcaacagcagaccagttcagtgtaat
gaggtctctgcccgaagcctctctctgtgctgcgacctgttgacgtctttgtgtcaggca
gccctgcagttctgcgacgacgctctagactgccacctacaggtcatcgttgggactctc
acggctcaggtgatcagccggcccaccatctcacagcaggtgcttagtctgttgcagttt
ctcgtgatacagaatcaacagaagttaaaaggagccatcggcaggttgcagccttttccc
gacctgcctgaattcaaagaactgcggtccgtacagcacaggctcaaatataacactggg
acctttacgctgcgacaggagatcacccacttcctgtcagtgacgtcctgtgactcctta
cctcggaccagactggagggactgaaggagctgaccagacagctgcatgacaagaaggaa
cagatcaaagacctgctcaaagagtgccacgctgaccccagtgatagcgtgctggtgaag
ctggttctaagtctgctgcagctctgtaagcttgcagccaaccaatcgggcggagccgac
atactagaggcagcaggcagttgtctgggagaactgggtccggtggatttctccactatc
gccctgctccatggcagagaccccctctttgaaaaggccatgtctctcttcacttccacg
gagtctcagcgtctctacatcattctcaactgcatgaatgatgcgctcactcagcagcgt
attgaggtgaagcgggcagcagctcagtgtgtgaagaacatcctcacaactcagtctgga
gttgacttctgggagcagcacaaagacaacagagaccccatgttggcctaccttaatcct
tttcgaaaggccaagagcaaggtggtttctgtgagtgctgcagagagtttggagtccagg
gagaagctggagagtcaggagtgttggatccctcaggccggcggccacaaggcctggctg
aaggctctgtgcaccgccctgctggacagtggaggagtaaagagtgaagctctgctcctg
tcgaggccactgtgtctggtgaaagtggactgctgtcagaggctgctgcccctcatcatt
cactccatccttctggacgactctgatggttcatggaggaagttgctctcattgcacatc
caggacttttttagtttctgttccagaagtgctcaggccgccagtcgctctgccacacct
ctcaactctgactctgagtctgacacggccagccgcggtttgtatgataagacctctctg
cgcaccatgctggcggtcattgactatttgagacaccagcagagaccactggagtctcag
agtaattcctgcggcaccgtgtgtaactcaaacttctggctggagctgaactacctggag
gtggccaaagctgctcagtcgtgtgcagctcacttcaccgctctgctgtacacggagatc
tacgtagacaaggtcaaagcttgcatggaggaaagccgcagaacaaggtccagagcgaca
tataagctcagttttgaagagcagagccagaacttcactatctcgagcctgacagagaaa
agtatggaggacaccaacatcagtctgcaggagcttctgattgaggtgtatcgaagcatc
ggagaacctgacagtctgtacggctgcggaggggagacgaataccagtccactgaccagg
attcgaacctatgagcatgaggctatgtgggggaaggccctgacctcctacgaccttcac
tcctctctgcctgagaccacgcgacaagtgggaatcctggagggcctgcagaactttggt
ctgagcagcatcctcaccacttacatgaggggtttggagagcgaaggggtggagtggggg
gctgagctaagagagctccggttccaggccgcatggaggaacacgcagtgggactgtgag
ctgtctgagaggagtgaggaatcagcacctggcttccacgaatcagtgttttcttccctt
caagcgctgagggacaaagagttctcgttatttgatgaaacgctgaaacaggccaggggt
gcagaggtggatgagttgtgcagaggtagtctggaggccgtgtcttctctgtacccggct
ctcaggaacctgcagagcatcagggagctggagagcgttaagcagctcttcttgagaacc
ttctcggatgtgactctgagggacgtttgcagccaatggcggcagcactcccagctcctc
gccgacagcgactttgcgttggttgagcccattttgaccgtccgttctgttgcccagcat
acattgatgtccaggacaggagaccctgagagcacagagtacctcagctctgtgctcact
gaccacctcatggagctctgccagctggctcgcaaggctgggaatacacagagggcagag
cgggcagtcttccagatgaaaccgcacgatggcgtagggtcctggacgtcattacctgtg
ttgtcatggcaactggaggaggcccaggtgttttgggcaaagggagagcagggtctggct
cttggcctgctgagacagatgatacacaacctggaggaaaaggtggatttaaatcctgct
ctggctccagttttcactcagtgcctcaggctgtgtggtaactggctcgctgagacctgt
ttggaaagtcctggagtcatactggagaagtacctggagagggcagtggaggtgatcgag
ggggagtcgggggtgcaggactccaggctgcagagtcagcggactgaggccttcttgtct
ctggcccgcttctctgacgctcagtaccagagcatcaacaaatacatgacctcctctgag
tttgagaacaagcaggcgctgctggagaaggccaaacaggaagtggacttgatgaaggag
cggaaagtgacctccaacaggtacactacaaaggtgcagagggagctgagtttggatgtg
aaggccctgtccaaccttaaggcagacagacagcgcttcctgtgtaaggcggtggagaat
tacattcagtgtctgaagcagggtgaggagcatgacacctgggtgttccgcctggcttca
ctctggttggagaacgatgacgttagtgctgtaaatgacatgatgaagaaaggggtgaag
cagatcccctcctacaagtttctgcctctcatgtatcagctggctgcacgcatgggaacc
aaggtggcaacaagcatcacggaggatacaggcttccatgatgtcctcactgatctgatc
tgccgagcgtctcttgagcatcctcaccacacgctcttcatcatcttcgctctcgtgaac
gccaacaaagacgagcacttctgcaggccccggcagtcgagaaacgctccgaggcagacg
ccgcctctcgatgtggagcgttcagacgtggccctgaagattatccacgccatcaggaaa
aagagaggcgagatgatccgagggatcgagcgtctgtgtgacgcctacatcactctggcc
tacatggacgctagcaagcacaagaatgagaagaaggcgattcccatccctgctgatcag
cccatcatgcaaatcaaagacctggatgaggttgtcatccccacaatggagattaaggtg
gatccaactggttgctatgacaacctggtgacaatcaggtccttcacacctcactatcac
ctggccggtggagtcaacctgcccaagatcattgactgtgtcggctctgatggcaagagc
aggagacaattggtcaagggcaaggacgacctgcggcaggatgcagtgatgcagcaggta
ttcagcatgtgctccatgctgctgcagcgcaactcagacactcgcaagaggaagctgaac
atccggcgatacaaggtggtgccgttctcgcagtgcagtggcgtgttagagtggtgctca
ggcaccgttcccatcgcggagtttctggtggatcttaataaaggagcccacaaacgcttc
caaccccgagactggaacaacttaacctgccgcgagacgatgatggctgctcagagactc
ggatttgatgagaagctccaggccttcactgaggtgtgcaagaacttcaggccggtcttc
aggtatttctgcatggaacgattcctggatccagcggattggatggagaaacgtctggct
tacacccgcagcgtggcgacctcctctatagttggctacttcgtgggtctgggcgacaga
cacaacaacaacatcctgattgacgagcagacggctgaactggttcacatcgatttaggt
gtggcctttgagcaggggaagatcctccccacaccagagaccgtccccttcagactcacc
agagacatcgtggacgggatgggcatcactggggtggagggagttttcaggagatgttgt
gagaagaccatagaggtgatgaggagctctcaagaagctctggtgaccattgtacaggtg
ctgctgtacgaccctttgttcgactggaccatgaaccccctgaaggcgttctacctgcag
cacgacgagcagcaggagctcaacgccacgctgacctccaccatgggcggagacgacata
gacaaccaccgtaaatccagtgacagtcagagcttcaacaaggtggctgagcgcgtgctg
ctgcggctgcaggagaagctgaagggcgtggaggagggcacggtgctcactgtcgggggg
caggtcaacctgctcatccaacaggccatggatcccaaaaacctcagcagactgttccct
ggatggcaagcctgggtgtag

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