Hippoglossus stenolepis (Pacific halibut): 118106715
Help
Entry
118106715 CDS
T08308
Symbol
n4bp2l2
Name
(RefSeq) breast cancer type 2 susceptibility protein homolog
KO
K08775
breast cancer 2 susceptibility protein
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp03440
Homologous recombination
hsp03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
118106715 (n4bp2l2)
03460 Fanconi anemia pathway
118106715 (n4bp2l2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
hsp04121
]
118106715 (n4bp2l2)
03036 Chromosome and associated proteins [BR:
hsp03036
]
118106715 (n4bp2l2)
03400 DNA repair and recombination proteins [BR:
hsp03400
]
118106715 (n4bp2l2)
Ubiquitin system [BR:
hsp04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
118106715 (n4bp2l2)
Chromosome and associated proteins [BR:
hsp03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Other centrosome duplication proteins
118106715 (n4bp2l2)
DNA repair and recombination proteins [BR:
hsp03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA complex
118106715 (n4bp2l2)
FA (Fanconi anemia) pathway
Downstream FA components
118106715 (n4bp2l2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCA-2_helical
BRCA2
BRCA-2_OB3
BRCA-2_OB1
BRCA2DBD_OB2
BRCA2_TR2
Tower
AAA_33
AAA_18
AAA_16
KTI12
Zeta_toxin
Viral_helicase1
AAA_22
nSTAND3
Motif
Other DBs
NCBI-GeneID:
118106715
NCBI-ProteinID:
XP_035011350
LinkDB
All DBs
Position
4:complement(6249053..6262385)
Genome browser
AA seq
2661 aa
AA seq
DB search
MDSVKNTISDSKQPPSTSERFGDIGCQLTASQKADVTELCTLLEEADTQFDFTQFKTVKL
QQHCQNNATSPQKADKELDPDFLMGIDFDDSFSSDAEKHKMRSVSDGTTNCEASNLTNKS
TLTKENSSTEDASPSSKSISDGRCCIVSAEPQNPHRAGYTETSEQENKTPLMSGAGFKTA
RGSDLRISKERLSKARALFADLGENLTDQKSGDKLSRDAAAKTEQRQITSITDKNAALNN
SKMDAASYQSGFQLASGKGVSISAKAMQEADSLFKDCDITDNKSGASVKHQKNTEPLPTF
SHTKNLLKLKGIQGRRDNFSEEAIGECSKASAGPAASHTKVVQHNSTVKAFSSPSCSTSK
SSGSSGMNQSNNGGGFCTASGKKVRVSADAVKKAERLLNEIHAPEDTKKQLKQEGDALRT
AHVADRIQVGPIQNGGFQTASGKGVVVSAAALKKAKSLLSQCEAFEDEIDVKPSHSKTPV
RGLAPRTSGFFAASGKPVGLSAEALQKAKALFSDITLSAELPAVSETKESQGNTENSDKT
HGGFMTAGGATAGLSKKKKFKANNILKEFDNGSVSVKSLQEADAFFKDCDIMDRNNGTTV
NYESGVAPVSGGGSEKKQDQRLTNTSEERGSGRCGFENLNVGPDVNQNGFLPSGDVKILE
DLTHGNPSKQLSTPLCTTSEKTGSSAFNIFSSSGGFCTASGKKVCVSDDAMTKAMSLLNE
SALLTDSNKIGKQILKQKEENGTLQSGGKGVALSFAAQKKEKMTNTKLPVSCSPQRKGGF
LAASGKPVAFSYEALQKAKALFSDMDLSAEIPTVSGTRKSDKHEEAQSSAGKISCGFSTA
GGAKVSVSQTNLLKAKNLLKEFADEETRPSDSYSTSPRATPKSDLSNIKNVERSTSCTLT
TASEKDMSAEESAPEVVESFQSVVTDPENETLRENALKGASEVKEGKTSVSWEGKRHDTL
GKETANMLGCEVKHTICGEGPKSKRPEESSYQLFPSLHFSGCSETQQRFLAQEALDCTKA
LLEDESLSVTSENEPLQDYPGSNATSAEEQKGRGKRLGDDANMTVQPPLKRRLLDEFDRT
VVGPRGSTLHPQKTCPNSVMKDRRAFKFQASPHPNITQPHRNGKNYVETKLQNTTPAQHF
TSGGSRSAHSNMPAFVPPFLNNAKMETCKDAVLKVNTRTPPAFVPPFKKQRTIVQESSCK
PQQEEDKHQHLFVTPTNRSTILPPTKKTQSSTDVAGNTSKVDIPPVALADTKHDYLTDNH
NVPVGCGSGDSAAKATREDDTFSRGQDMFQNLENVELARDMQDMRIRKKKRQTIRPLPGS
LFLTKTSGVSRIPLKAAANGKLPGIYTSKQLYGYGVHQHVSDISSETAEAFRFNVHQFLK
LEAFTDGGGVQLADGGWLIPSKDGTAGKEEFYKALCDTPGVDPKLMSEEWVFNHFRWIVW
KQASMERSFPETMGGLCLTPQQVLLQLKYRYDVEIDQSRRPALRKIMEKDDTSAKTQVLC
VCGVVSRGHSSIRPSRGDTKTPQGADAKVEPPSAVVWLTDGWYAIKAQLDEPLTAMLHKG
RLAVGGKLIVYGAQLVGSQEACSPLEAPESLMLKIYANSTRPARWDTKLGFHRDPRPFLL
PISSLYSNGGPVGCVDITILRSYPIQWMERKPDAGVVFRSGRAEEKEERRYSSQNQKSME
ILFTKIQTEFEKEQTGNNKPQRRRRTINRKDIANLQDGEELYEAVEDDPAYLEAHLSEQQ
LETVQTYRRSLMEKKQAELQDRYRRALEAESGDGTCPKRDVTPVWKLCVSDSMGSGSVYQ
LNFWRPSSDLQALLKEGRRYKVYNLSTSEGKKRSGIETVQLTGTKKTQFQDLEAQEWLSE
QFQPRVSTSFMNLQNPEFQPLCGEVDLTGFIISIMDGQGSSPAVYLADGELNFVKVRCFS
SFAQSGLEDVVKPRVLLALSNLQLRGQSLSPTPVLYAGDLTVFSTNPKEVHLQESLSQLR
NLLQGQQNFFLTAEETLLHLLKSDGLRSISSPAVHPLTPACATDMRQDTKTSLITQQPIR
SFGSFTPVSRNPPAPTSLTEKDPKSLKRRRALDYLCRIPSPPALSHLGSVATPCVKKTFN
PPRRSETPSTLKTEQTPARKPVVSPKEGEWVNDEELAMIDTQNLGVGDSMKRKKSFRKQG
IGLEVDFPVLFSINFSAIIHVSWVFTMSRSKSSNTTSPAVQRARVGKDGGRDPKPVSSDS
SKRERAIKEVGLTSSTFIGPTFPRPASAPKKSKKSKKSKDIEDTLSEFYKELEKIDTPDG
ADGNSRKPEEGFARPRERTYNAGNSAETDGWRRSDGERPGSWPHWYQNEPYHPRGPRPGG
DLTPQNQWRYPHPQNRPPNPGLHRPPFRHPPPPPAFQGPQNPPPRVNPNWSGSGPANQYQ
EFSSIPSPNVRGAPSQGHYGEYHSDRDERVRSYDAYSDNGNREWSKEREAEWSQFDGGHD
QNRVFNSENKVWEPQPHCRPPDNTQAHRSSLVLILLRGLPGSGKTTLARELLSTGPSGVI
LGTDDYFLHKDDYCYEPFLLGEAHEWNQSRAQDAMHDRRSPIIIDNTNIQAWEMKPYVKM
ALERGYKVDFCEPDTSWKLDPYELQRRNKHGVSQEKIARMLDRFSFPISIDTVLSSQEPP
HIDQRHRPEQPQTMRGSRDLQ
NT seq
7986 nt
NT seq
+upstream
nt +downstream
nt
atggattcagtgaaaaatacaatctctgactcaaagcagccaccgtctacgagtgaaaga
tttggggatataggttgtcagctaacagcgtcacaaaaagctgacgtgacagaactgtgc
actctcctggaagaagcagatactcagtttgactttacacagttcaaaactgtgaagcta
cagcagcattgtcaaaataacgccacctccccccaaaaagctgacaaagaacttgaccct
gattttcttatgggtatcgattttgatgacagctttagttccgatgctgaaaagcataaa
atgaggtcagtttcagacggtacgacaaactgtgaggcatcaaatctgacaaataaatcc
accctgacaaaagaaaattcctctactgaagatgcgtctccctcttcaaagagcatctct
gacggcaggtgctgtattgtgtcagctgaaccccaaaatcctcacagagctgggtacact
gagacaagcgagcaggagaacaaaacccctttgatgtctggtgcaggattcaaaactgcg
agaggaagtgatttgagaatttcaaaagaacgtttgagcaaagccagagctttgtttgca
gatttaggggaaaatctgactgatcagaagtcgggagacaagctaagcagagatgctgct
gctaaaaccgagcagcgacagatcaccagcattacagataaaaatgctgcattgaataac
agcaaaatggacgcagcttcgtatcaaagtggattccaactggccagtgggaagggggtt
tcgatttcagcgaaagctatgcaagaggccgattccctcttcaaagactgcgacattacc
gacaataagtctggtgcgtctgtaaaacatcaaaagaacacagaaccgttgcctacattc
agtcacacgaaaaaccttttgaaacttaaaggtatccaaggacgtagagataacttttct
gaagaagcaatcggtgaatgttcaaaagcgagtgctggaccagctgccagtcatacaaag
gttgtacagcacaattccaccgtaaaagcgttttcttctccctcgtgctcaacatcaaag
agttctggctcctctggaatgaatcagtcgaacaatggcggtggattctgtacagccagc
gggaagaaggtccgcgtgtcggctgatgcggtgaaaaaagctgagcgtctgttaaatgaa
attcatgcacctgaggacacaaagaaacaactgaaacaggaaggagacgctttaagaaca
gctcatgtggctgatcgaattcaagttggaccaattcaaaacggtggatttcaaacagcc
agcggcaaaggagtcgtcgtttcagctgcagctctcaagaaagcaaaatcgctgttgagt
caatgtgaagcattcgaggatgaaatcgatgtaaaaccatctcactccaagacgcctgtt
cgaggtcttgcacccaggacaagtggattttttgcagccagtgggaaacctgtgggactt
tcagctgaggccctccagaaggcaaaagctcttttcagtgacatcactctcagtgcagag
ctcccggctgtttcagagacaaaggagagtcaaggcaacacggaaaattcagacaaaaca
cacggtggtttcatgactgcagggggcgcaacagcgggcttgtctaagaaaaaaaagttc
aaagcaaacaacattttgaaagaatttgataatggttctgtttccgtaaaatcgctgcaa
gaagcagatgctttcttcaaagactgtgacatcatggacagaaacaacggaaccacagtt
aactatgagagcggtgtagcacctgtgagtggaggtggcagtgagaagaaacaagatcag
aggctgacaaacacttctgaagagcgtggaagtggacgctgtgggtttgaaaatttgaat
gtgggaccagatgtaaaccagaacggttttctgccttccggtgatgtgaagatacttgaa
gatttgacccatggaaacccatcaaagcaactctctaccccgttgtgcacaacatcagag
aaaactggttcctctgccttcaatatatttagcagcagtggtgggttctgtacagccagt
gggaaaaaagtatgtgtgtcagatgatgcaatgactaaagcaatgtcactattgaatgaa
agtgctttgcttacggattcaaacaaaatcggaaaacaaattctgaaacaaaaagaagaa
aatgggacgcttcagagtggtggaaaaggagtcgctctttcatttgcagcccagaagaaa
gaaaaaatgacaaataccaagttgccagtttcttgttcaccacagaggaaagggggattc
cttgcagccagtggtaaaccagtggcattttcatatgaagcccttcagaaggcaaaagct
ctcttcagtgacatggatctcagtgcagagatcccgactgtttcaggcacaagaaagagc
gacaaacacgaagaggctcaaagtagtgcaggaaaaataagttgtggtttctcaactgca
gggggagctaaagtcagcgtgtcacagacaaatcttctgaaagcaaagaaccttttgaaa
gaatttgcagatgaagaaactcgtccctcggattcgtactcaacaagcccacgtgccacc
cccaagtcggatctatcaaatataaaaaatgtggaaagaagtacaagttgtacactcacc
acagcgagtgaaaaggacatgtctgctgaggaaagtgcccctgaagtcgttgaatctttt
cagtctgtggtgactgaccctgaaaatgaaactctcagagaaaatgcccttaaaggtgca
tctgaggtaaaggaaggtaaaacgtccgtatcatgggagggcaagcgccacgacactctt
ggaaaggaaacagcaaacatgttgggttgtgaagttaaacatacaatctgcggtgaggga
cccaagtccaaaaggccggaggagtcttcatatcaattatttccatcacttcacttcagt
ggctgctctgagacccagcagaggtttctcgcccaggaagctctcgactgcacgaaagct
ttgttagaggatgaaagtctctcagtgacatcagagaatgagccactgcaagattaccca
ggatccaatgccacatctgcagaggaacagaaaggaagagggaaaagattgggagacgat
gcaaatatgactgttcagcctcccctgaaaagacgattactggacgaattcgatcggact
gttgttggtccgagaggttcaacactacatccacaaaaaacttgtccaaacagtgtaatg
aaagacaggagagctttcaagtttcaagcctctcctcatccaaatatcacacagccacac
aggaatggaaaaaactatgtggaaaccaaactgcaaaacacaacaccagcacaacatttt
acctcaggaggaagcagatcagcgcattcaaacatgccagcgtttgttcctccattcctc
aacaatgcaaagatggagacctgcaaggatgccgtgctcaaagtcaacacaagaacacct
cctgcatttgttcctcctttcaaaaaacaaagaactattgtccaagagagttcctgtaaa
ccacagcaggaggaggacaaacaccagcatctctttgtaacacccactaaccgcagcact
atcttaccgcccactaaaaaaacacaaagcagtacagatgtagctggtaatacaagcaaa
gtagatattccaccggtggccttggctgacacaaagcatgattatctgactgataatcac
aatgttcctgttggctgtggttcaggggactctgctgcaaaggcaacacgtgaggacgac
acgttttccagaggccaagacatgtttcagaatcttgaaaatgtggagttggcgcgggat
atgcaagacatgagaatcaggaagaagaagcgccagacgatccgaccgttgccgggtagt
ttgtttctaaccaaaacctctggggtctcaaggatcccattaaaagctgctgcaaatgga
aagctccctgggatatacacctcaaaacagctgtatggatatggagtgcatcaacatgtg
tccgacatcagcagcgagacagccgaggcttttcgcttcaatgtgcatcagttcctgaaa
ctggaagcgtttacagacggaggtggcgttcagctggccgatggaggatggctaatcccc
agcaaggatgggactgcaggaaaagaagagttttataaagccctgtgtgacactccaggt
gtggatcctaaactgatgagcgaggagtgggtgttcaatcacttcagatggatcgtgtgg
aaacaagcctccatggaaagatcttttccagaaacgatgggcggcctctgtctcacgcca
cagcaggttctccttcagctcaagtacagatatgatgtagagatcgaccagagccgtaga
cccgctctgaggaagatcatggaaaaggacgacacatcagccaagacccaggttctctgt
gtttgcggggtcgtctccaggggacactcctcaatcagaccgagtcgcggcgacaccaag
actccacaaggggccgatgccaaggtcgaacccccctctgcagtagtttggctgacggat
gggtggtacgccatcaaagctcagctggatgaacctttgactgccatgcttcacaaaggt
cgactggctgtcggtgggaagctgatcgtctacggggctcaactggtgggatcgcaggag
gcctgttcccctctggaggcaccggaatccctcatgttaaagatttacgccaacagcacc
agacctgcacggtgggacaccaagctgggatttcacagagatccccggccgttcctgctg
cctatctccagtttgtacagcaatggaggaccagtaggatgtgtggacattaccatactc
agaagctaccccatacagtggatggagaggaaaccagatgcgggcgttgtgtttcgttct
ggtcgtgcagaagagaaagaggagagacgatacagcagccaaaaccaaaagtccatggag
attctttttaccaagattcaaactgaatttgaaaaagagcagacaggtaacaacaaacct
caacgcagaagacgcacaattaatcgtaaggatattgcaaatctgcaagatggggaggag
ctgtatgaagcagtggaggatgatccagcttacttggaggctcatttgagtgagcaacag
ttggagactgttcaaacctacagacgctccctgatggagaagaaacaggctgagctacag
gatcgataccgtcgggctctagaagcagagagcggtgacgggacctgtcccaaacgagac
gtcacacctgtgtggaaactctgcgtttctgactctatgggcagtggcagtgtttaccag
ttgaatttttggcgaccctcctcagatcttcaggctctactgaaggaaggccgtcgatac
aaagtttataatctctccacttcagagggaaagaaacgcagcggaatcgaaacggttcaa
ctcactgggacaaagaaaacccagtttcaggacctggaggcccaggaatggttatcagaa
cagtttcaaccgagggtttccaccagtttcatgaatcttcaaaacccagaattccagccg
ctgtgtggagaggttgatctcacaggatttatcatcagtatcatggatggacagggttcc
tctccggcagtttatttggctgatggagaactgaactttgttaaagtgcgctgtttcagc
agctttgctcagtctggcctggaggatgttgtaaaaccacgtgtgctgttggctctgagc
aacctgcagctgagaggtcagtccctgtctcccactcctgttctctacgctggagatctg
accgtcttctctacgaaccccaaggaggttcatctacaggaatccctcagccaactcaga
aacctgctccagggtcagcagaacttcttcctcactgctgaggagacacttttacattta
ctcaagtccgatggcctaagatccatctcttctccagctgtccaccctctaaccccagct
tgtgcaactgacatgagacaagacacaaagacaagcctgatcactcagcagccaatcaga
agcttcggatccttcacccctgtcagcaggaatccacctgcgccaacgtctttaacagag
aaagaccccaaaagcctgaagaggagaagagctctggactatctgtgtcgcatcccgtct
ccaccggctctctcccatctgggctcggtggcgactccgtgtgtgaagaagacgttcaac
cctcctcggaggtctgagacaccaagcactttaaagacagaacagactccagctcgcaaa
cctgtcgtctcaccaaaggaaggtgaatgggtgaacgacgaggagctggcgatgattgat
actcagaacttgggtgttggtgattcaatgaagaggaagaagagcttccgtaaacaaggc
atcggtttggaagttgatttcccggttttattttccattaacttttccgccattattcat
gtgtcctgggtttttacgatgtctcgtagtaaatcctccaacacgacctctcctgccgtt
caaagagcccgtgtgggtaaagatggaggacgtgaccctaagcctgtgagcagcgacagc
agcaagagggagcgtgcgatcaaggaggtcggactcaccagcagcacattcatcggcccc
acgtttcctcggccggcatccgcaccgaagaagtcgaagaagtcgaagaagtcgaaggac
atcgaggacacgctgagcgagttctacaaagagctggagaagatcgacacgcccgacggt
gccgatggaaactcaaggaaaccagaggaaggttttgctcgaccacgcgagagaacgtat
aatgccggcaactctgcagaaacagacggctggcggagaagcgatggagagaggccgggg
tcttggccacactggtatcagaacgagccgtatcaccccagggggccgaggccaggcggt
gacctgacccctcagaatcaatggcgttatcctcatccacagaacagaccaccaaaccca
gggttacacagacccccattccgccatccaccgcccccacctgcattccagggtccacag
aacccgccgccacgcgtgaatcccaactggagcggttcaggccccgcaaaccagtatcaa
gagttctccagcatcccatctccgaatgtgcgcggagcaccctctcagggccactatgga
gagtatcactctgaccgggatgaacgggttcgcagctacgatgcgtactcagataatgga
aacagagaatggtccaaagaaagagaagcagaatggtctcagtttgatggaggtcatgac
caaaaccgagtatttaattcagaaaataaagtgtgggagccacagcctcactgcagaccc
cccgataacactcaagcgcaccgttcttccttggtgctgatcctgttgaggggactgcca
ggatctgggaagacgacacttgccagggagctgctctccactggtcccagtggggtaata
ctgggcacagatgactactttcttcacaaggatgactactgctatgaaccattccttctt
ggagaggcccatgaatggaaccagagcagagcccaagatgctatgcatgatcgccgctct
ccaattattatcgataatacaaacattcaagcctgggagatgaagccatatgtcaaaatg
gccttggagcgaggatacaaagtcgacttctgtgaacctgacaccagctggaagttggat
ccttatgagcttcagaggagaaacaagcacggggtttcccaggagaagatcgcgcggatg
ctggatcgcttttcattccccatttccatagacactgtcctgagttcccaggagccgcct
cacatcgaccagagacatcgaccagagcagccgcagacgatgagggggagcagagatctc
cagtag
DBGET
integrated database retrieval system