KEGG   Hippoglossus stenolepis (Pacific halibut): 118106715
Entry
118106715         CDS       T08308                                 
Symbol
n4bp2l2
Name
(RefSeq) breast cancer type 2 susceptibility protein homolog
  KO
K08775  breast cancer 2 susceptibility protein
Organism
hsp  Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp03440  Homologous recombination
hsp03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:hsp00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    118106715 (n4bp2l2)
   03460 Fanconi anemia pathway
    118106715 (n4bp2l2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:hsp04121]
    118106715 (n4bp2l2)
   03036 Chromosome and associated proteins [BR:hsp03036]
    118106715 (n4bp2l2)
   03400 DNA repair and recombination proteins [BR:hsp03400]
    118106715 (n4bp2l2)
Ubiquitin system [BR:hsp04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   BRCC complex
    118106715 (n4bp2l2)
Chromosome and associated proteins [BR:hsp03036]
 Eukaryotic type
  Centrosome formation proteins
   Centrosome duplication proteins
    Other centrosome duplication proteins
     118106715 (n4bp2l2)
DNA repair and recombination proteins [BR:hsp03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    BRCA complex
     118106715 (n4bp2l2)
   FA (Fanconi anemia) pathway
    Downstream FA components
     118106715 (n4bp2l2)
SSDB
Motif
Pfam: BRCA-2_helical BRCA2 BRCA-2_OB3 BRCA-2_OB1 BRCA2DBD_OB2 BRCA2_TR2 Tower AAA_33 AAA_18 AAA_16 KTI12 Zeta_toxin Viral_helicase1 AAA_22 nSTAND3
Other DBs
NCBI-GeneID: 118106715
NCBI-ProteinID: XP_035011350
LinkDB
Position
4:complement(6249053..6262385)
AA seq 2661 aa
MDSVKNTISDSKQPPSTSERFGDIGCQLTASQKADVTELCTLLEEADTQFDFTQFKTVKL
QQHCQNNATSPQKADKELDPDFLMGIDFDDSFSSDAEKHKMRSVSDGTTNCEASNLTNKS
TLTKENSSTEDASPSSKSISDGRCCIVSAEPQNPHRAGYTETSEQENKTPLMSGAGFKTA
RGSDLRISKERLSKARALFADLGENLTDQKSGDKLSRDAAAKTEQRQITSITDKNAALNN
SKMDAASYQSGFQLASGKGVSISAKAMQEADSLFKDCDITDNKSGASVKHQKNTEPLPTF
SHTKNLLKLKGIQGRRDNFSEEAIGECSKASAGPAASHTKVVQHNSTVKAFSSPSCSTSK
SSGSSGMNQSNNGGGFCTASGKKVRVSADAVKKAERLLNEIHAPEDTKKQLKQEGDALRT
AHVADRIQVGPIQNGGFQTASGKGVVVSAAALKKAKSLLSQCEAFEDEIDVKPSHSKTPV
RGLAPRTSGFFAASGKPVGLSAEALQKAKALFSDITLSAELPAVSETKESQGNTENSDKT
HGGFMTAGGATAGLSKKKKFKANNILKEFDNGSVSVKSLQEADAFFKDCDIMDRNNGTTV
NYESGVAPVSGGGSEKKQDQRLTNTSEERGSGRCGFENLNVGPDVNQNGFLPSGDVKILE
DLTHGNPSKQLSTPLCTTSEKTGSSAFNIFSSSGGFCTASGKKVCVSDDAMTKAMSLLNE
SALLTDSNKIGKQILKQKEENGTLQSGGKGVALSFAAQKKEKMTNTKLPVSCSPQRKGGF
LAASGKPVAFSYEALQKAKALFSDMDLSAEIPTVSGTRKSDKHEEAQSSAGKISCGFSTA
GGAKVSVSQTNLLKAKNLLKEFADEETRPSDSYSTSPRATPKSDLSNIKNVERSTSCTLT
TASEKDMSAEESAPEVVESFQSVVTDPENETLRENALKGASEVKEGKTSVSWEGKRHDTL
GKETANMLGCEVKHTICGEGPKSKRPEESSYQLFPSLHFSGCSETQQRFLAQEALDCTKA
LLEDESLSVTSENEPLQDYPGSNATSAEEQKGRGKRLGDDANMTVQPPLKRRLLDEFDRT
VVGPRGSTLHPQKTCPNSVMKDRRAFKFQASPHPNITQPHRNGKNYVETKLQNTTPAQHF
TSGGSRSAHSNMPAFVPPFLNNAKMETCKDAVLKVNTRTPPAFVPPFKKQRTIVQESSCK
PQQEEDKHQHLFVTPTNRSTILPPTKKTQSSTDVAGNTSKVDIPPVALADTKHDYLTDNH
NVPVGCGSGDSAAKATREDDTFSRGQDMFQNLENVELARDMQDMRIRKKKRQTIRPLPGS
LFLTKTSGVSRIPLKAAANGKLPGIYTSKQLYGYGVHQHVSDISSETAEAFRFNVHQFLK
LEAFTDGGGVQLADGGWLIPSKDGTAGKEEFYKALCDTPGVDPKLMSEEWVFNHFRWIVW
KQASMERSFPETMGGLCLTPQQVLLQLKYRYDVEIDQSRRPALRKIMEKDDTSAKTQVLC
VCGVVSRGHSSIRPSRGDTKTPQGADAKVEPPSAVVWLTDGWYAIKAQLDEPLTAMLHKG
RLAVGGKLIVYGAQLVGSQEACSPLEAPESLMLKIYANSTRPARWDTKLGFHRDPRPFLL
PISSLYSNGGPVGCVDITILRSYPIQWMERKPDAGVVFRSGRAEEKEERRYSSQNQKSME
ILFTKIQTEFEKEQTGNNKPQRRRRTINRKDIANLQDGEELYEAVEDDPAYLEAHLSEQQ
LETVQTYRRSLMEKKQAELQDRYRRALEAESGDGTCPKRDVTPVWKLCVSDSMGSGSVYQ
LNFWRPSSDLQALLKEGRRYKVYNLSTSEGKKRSGIETVQLTGTKKTQFQDLEAQEWLSE
QFQPRVSTSFMNLQNPEFQPLCGEVDLTGFIISIMDGQGSSPAVYLADGELNFVKVRCFS
SFAQSGLEDVVKPRVLLALSNLQLRGQSLSPTPVLYAGDLTVFSTNPKEVHLQESLSQLR
NLLQGQQNFFLTAEETLLHLLKSDGLRSISSPAVHPLTPACATDMRQDTKTSLITQQPIR
SFGSFTPVSRNPPAPTSLTEKDPKSLKRRRALDYLCRIPSPPALSHLGSVATPCVKKTFN
PPRRSETPSTLKTEQTPARKPVVSPKEGEWVNDEELAMIDTQNLGVGDSMKRKKSFRKQG
IGLEVDFPVLFSINFSAIIHVSWVFTMSRSKSSNTTSPAVQRARVGKDGGRDPKPVSSDS
SKRERAIKEVGLTSSTFIGPTFPRPASAPKKSKKSKKSKDIEDTLSEFYKELEKIDTPDG
ADGNSRKPEEGFARPRERTYNAGNSAETDGWRRSDGERPGSWPHWYQNEPYHPRGPRPGG
DLTPQNQWRYPHPQNRPPNPGLHRPPFRHPPPPPAFQGPQNPPPRVNPNWSGSGPANQYQ
EFSSIPSPNVRGAPSQGHYGEYHSDRDERVRSYDAYSDNGNREWSKEREAEWSQFDGGHD
QNRVFNSENKVWEPQPHCRPPDNTQAHRSSLVLILLRGLPGSGKTTLARELLSTGPSGVI
LGTDDYFLHKDDYCYEPFLLGEAHEWNQSRAQDAMHDRRSPIIIDNTNIQAWEMKPYVKM
ALERGYKVDFCEPDTSWKLDPYELQRRNKHGVSQEKIARMLDRFSFPISIDTVLSSQEPP
HIDQRHRPEQPQTMRGSRDLQ
NT seq 7986 nt   +upstreamnt  +downstreamnt
atggattcagtgaaaaatacaatctctgactcaaagcagccaccgtctacgagtgaaaga
tttggggatataggttgtcagctaacagcgtcacaaaaagctgacgtgacagaactgtgc
actctcctggaagaagcagatactcagtttgactttacacagttcaaaactgtgaagcta
cagcagcattgtcaaaataacgccacctccccccaaaaagctgacaaagaacttgaccct
gattttcttatgggtatcgattttgatgacagctttagttccgatgctgaaaagcataaa
atgaggtcagtttcagacggtacgacaaactgtgaggcatcaaatctgacaaataaatcc
accctgacaaaagaaaattcctctactgaagatgcgtctccctcttcaaagagcatctct
gacggcaggtgctgtattgtgtcagctgaaccccaaaatcctcacagagctgggtacact
gagacaagcgagcaggagaacaaaacccctttgatgtctggtgcaggattcaaaactgcg
agaggaagtgatttgagaatttcaaaagaacgtttgagcaaagccagagctttgtttgca
gatttaggggaaaatctgactgatcagaagtcgggagacaagctaagcagagatgctgct
gctaaaaccgagcagcgacagatcaccagcattacagataaaaatgctgcattgaataac
agcaaaatggacgcagcttcgtatcaaagtggattccaactggccagtgggaagggggtt
tcgatttcagcgaaagctatgcaagaggccgattccctcttcaaagactgcgacattacc
gacaataagtctggtgcgtctgtaaaacatcaaaagaacacagaaccgttgcctacattc
agtcacacgaaaaaccttttgaaacttaaaggtatccaaggacgtagagataacttttct
gaagaagcaatcggtgaatgttcaaaagcgagtgctggaccagctgccagtcatacaaag
gttgtacagcacaattccaccgtaaaagcgttttcttctccctcgtgctcaacatcaaag
agttctggctcctctggaatgaatcagtcgaacaatggcggtggattctgtacagccagc
gggaagaaggtccgcgtgtcggctgatgcggtgaaaaaagctgagcgtctgttaaatgaa
attcatgcacctgaggacacaaagaaacaactgaaacaggaaggagacgctttaagaaca
gctcatgtggctgatcgaattcaagttggaccaattcaaaacggtggatttcaaacagcc
agcggcaaaggagtcgtcgtttcagctgcagctctcaagaaagcaaaatcgctgttgagt
caatgtgaagcattcgaggatgaaatcgatgtaaaaccatctcactccaagacgcctgtt
cgaggtcttgcacccaggacaagtggattttttgcagccagtgggaaacctgtgggactt
tcagctgaggccctccagaaggcaaaagctcttttcagtgacatcactctcagtgcagag
ctcccggctgtttcagagacaaaggagagtcaaggcaacacggaaaattcagacaaaaca
cacggtggtttcatgactgcagggggcgcaacagcgggcttgtctaagaaaaaaaagttc
aaagcaaacaacattttgaaagaatttgataatggttctgtttccgtaaaatcgctgcaa
gaagcagatgctttcttcaaagactgtgacatcatggacagaaacaacggaaccacagtt
aactatgagagcggtgtagcacctgtgagtggaggtggcagtgagaagaaacaagatcag
aggctgacaaacacttctgaagagcgtggaagtggacgctgtgggtttgaaaatttgaat
gtgggaccagatgtaaaccagaacggttttctgccttccggtgatgtgaagatacttgaa
gatttgacccatggaaacccatcaaagcaactctctaccccgttgtgcacaacatcagag
aaaactggttcctctgccttcaatatatttagcagcagtggtgggttctgtacagccagt
gggaaaaaagtatgtgtgtcagatgatgcaatgactaaagcaatgtcactattgaatgaa
agtgctttgcttacggattcaaacaaaatcggaaaacaaattctgaaacaaaaagaagaa
aatgggacgcttcagagtggtggaaaaggagtcgctctttcatttgcagcccagaagaaa
gaaaaaatgacaaataccaagttgccagtttcttgttcaccacagaggaaagggggattc
cttgcagccagtggtaaaccagtggcattttcatatgaagcccttcagaaggcaaaagct
ctcttcagtgacatggatctcagtgcagagatcccgactgtttcaggcacaagaaagagc
gacaaacacgaagaggctcaaagtagtgcaggaaaaataagttgtggtttctcaactgca
gggggagctaaagtcagcgtgtcacagacaaatcttctgaaagcaaagaaccttttgaaa
gaatttgcagatgaagaaactcgtccctcggattcgtactcaacaagcccacgtgccacc
cccaagtcggatctatcaaatataaaaaatgtggaaagaagtacaagttgtacactcacc
acagcgagtgaaaaggacatgtctgctgaggaaagtgcccctgaagtcgttgaatctttt
cagtctgtggtgactgaccctgaaaatgaaactctcagagaaaatgcccttaaaggtgca
tctgaggtaaaggaaggtaaaacgtccgtatcatgggagggcaagcgccacgacactctt
ggaaaggaaacagcaaacatgttgggttgtgaagttaaacatacaatctgcggtgaggga
cccaagtccaaaaggccggaggagtcttcatatcaattatttccatcacttcacttcagt
ggctgctctgagacccagcagaggtttctcgcccaggaagctctcgactgcacgaaagct
ttgttagaggatgaaagtctctcagtgacatcagagaatgagccactgcaagattaccca
ggatccaatgccacatctgcagaggaacagaaaggaagagggaaaagattgggagacgat
gcaaatatgactgttcagcctcccctgaaaagacgattactggacgaattcgatcggact
gttgttggtccgagaggttcaacactacatccacaaaaaacttgtccaaacagtgtaatg
aaagacaggagagctttcaagtttcaagcctctcctcatccaaatatcacacagccacac
aggaatggaaaaaactatgtggaaaccaaactgcaaaacacaacaccagcacaacatttt
acctcaggaggaagcagatcagcgcattcaaacatgccagcgtttgttcctccattcctc
aacaatgcaaagatggagacctgcaaggatgccgtgctcaaagtcaacacaagaacacct
cctgcatttgttcctcctttcaaaaaacaaagaactattgtccaagagagttcctgtaaa
ccacagcaggaggaggacaaacaccagcatctctttgtaacacccactaaccgcagcact
atcttaccgcccactaaaaaaacacaaagcagtacagatgtagctggtaatacaagcaaa
gtagatattccaccggtggccttggctgacacaaagcatgattatctgactgataatcac
aatgttcctgttggctgtggttcaggggactctgctgcaaaggcaacacgtgaggacgac
acgttttccagaggccaagacatgtttcagaatcttgaaaatgtggagttggcgcgggat
atgcaagacatgagaatcaggaagaagaagcgccagacgatccgaccgttgccgggtagt
ttgtttctaaccaaaacctctggggtctcaaggatcccattaaaagctgctgcaaatgga
aagctccctgggatatacacctcaaaacagctgtatggatatggagtgcatcaacatgtg
tccgacatcagcagcgagacagccgaggcttttcgcttcaatgtgcatcagttcctgaaa
ctggaagcgtttacagacggaggtggcgttcagctggccgatggaggatggctaatcccc
agcaaggatgggactgcaggaaaagaagagttttataaagccctgtgtgacactccaggt
gtggatcctaaactgatgagcgaggagtgggtgttcaatcacttcagatggatcgtgtgg
aaacaagcctccatggaaagatcttttccagaaacgatgggcggcctctgtctcacgcca
cagcaggttctccttcagctcaagtacagatatgatgtagagatcgaccagagccgtaga
cccgctctgaggaagatcatggaaaaggacgacacatcagccaagacccaggttctctgt
gtttgcggggtcgtctccaggggacactcctcaatcagaccgagtcgcggcgacaccaag
actccacaaggggccgatgccaaggtcgaacccccctctgcagtagtttggctgacggat
gggtggtacgccatcaaagctcagctggatgaacctttgactgccatgcttcacaaaggt
cgactggctgtcggtgggaagctgatcgtctacggggctcaactggtgggatcgcaggag
gcctgttcccctctggaggcaccggaatccctcatgttaaagatttacgccaacagcacc
agacctgcacggtgggacaccaagctgggatttcacagagatccccggccgttcctgctg
cctatctccagtttgtacagcaatggaggaccagtaggatgtgtggacattaccatactc
agaagctaccccatacagtggatggagaggaaaccagatgcgggcgttgtgtttcgttct
ggtcgtgcagaagagaaagaggagagacgatacagcagccaaaaccaaaagtccatggag
attctttttaccaagattcaaactgaatttgaaaaagagcagacaggtaacaacaaacct
caacgcagaagacgcacaattaatcgtaaggatattgcaaatctgcaagatggggaggag
ctgtatgaagcagtggaggatgatccagcttacttggaggctcatttgagtgagcaacag
ttggagactgttcaaacctacagacgctccctgatggagaagaaacaggctgagctacag
gatcgataccgtcgggctctagaagcagagagcggtgacgggacctgtcccaaacgagac
gtcacacctgtgtggaaactctgcgtttctgactctatgggcagtggcagtgtttaccag
ttgaatttttggcgaccctcctcagatcttcaggctctactgaaggaaggccgtcgatac
aaagtttataatctctccacttcagagggaaagaaacgcagcggaatcgaaacggttcaa
ctcactgggacaaagaaaacccagtttcaggacctggaggcccaggaatggttatcagaa
cagtttcaaccgagggtttccaccagtttcatgaatcttcaaaacccagaattccagccg
ctgtgtggagaggttgatctcacaggatttatcatcagtatcatggatggacagggttcc
tctccggcagtttatttggctgatggagaactgaactttgttaaagtgcgctgtttcagc
agctttgctcagtctggcctggaggatgttgtaaaaccacgtgtgctgttggctctgagc
aacctgcagctgagaggtcagtccctgtctcccactcctgttctctacgctggagatctg
accgtcttctctacgaaccccaaggaggttcatctacaggaatccctcagccaactcaga
aacctgctccagggtcagcagaacttcttcctcactgctgaggagacacttttacattta
ctcaagtccgatggcctaagatccatctcttctccagctgtccaccctctaaccccagct
tgtgcaactgacatgagacaagacacaaagacaagcctgatcactcagcagccaatcaga
agcttcggatccttcacccctgtcagcaggaatccacctgcgccaacgtctttaacagag
aaagaccccaaaagcctgaagaggagaagagctctggactatctgtgtcgcatcccgtct
ccaccggctctctcccatctgggctcggtggcgactccgtgtgtgaagaagacgttcaac
cctcctcggaggtctgagacaccaagcactttaaagacagaacagactccagctcgcaaa
cctgtcgtctcaccaaaggaaggtgaatgggtgaacgacgaggagctggcgatgattgat
actcagaacttgggtgttggtgattcaatgaagaggaagaagagcttccgtaaacaaggc
atcggtttggaagttgatttcccggttttattttccattaacttttccgccattattcat
gtgtcctgggtttttacgatgtctcgtagtaaatcctccaacacgacctctcctgccgtt
caaagagcccgtgtgggtaaagatggaggacgtgaccctaagcctgtgagcagcgacagc
agcaagagggagcgtgcgatcaaggaggtcggactcaccagcagcacattcatcggcccc
acgtttcctcggccggcatccgcaccgaagaagtcgaagaagtcgaagaagtcgaaggac
atcgaggacacgctgagcgagttctacaaagagctggagaagatcgacacgcccgacggt
gccgatggaaactcaaggaaaccagaggaaggttttgctcgaccacgcgagagaacgtat
aatgccggcaactctgcagaaacagacggctggcggagaagcgatggagagaggccgggg
tcttggccacactggtatcagaacgagccgtatcaccccagggggccgaggccaggcggt
gacctgacccctcagaatcaatggcgttatcctcatccacagaacagaccaccaaaccca
gggttacacagacccccattccgccatccaccgcccccacctgcattccagggtccacag
aacccgccgccacgcgtgaatcccaactggagcggttcaggccccgcaaaccagtatcaa
gagttctccagcatcccatctccgaatgtgcgcggagcaccctctcagggccactatgga
gagtatcactctgaccgggatgaacgggttcgcagctacgatgcgtactcagataatgga
aacagagaatggtccaaagaaagagaagcagaatggtctcagtttgatggaggtcatgac
caaaaccgagtatttaattcagaaaataaagtgtgggagccacagcctcactgcagaccc
cccgataacactcaagcgcaccgttcttccttggtgctgatcctgttgaggggactgcca
ggatctgggaagacgacacttgccagggagctgctctccactggtcccagtggggtaata
ctgggcacagatgactactttcttcacaaggatgactactgctatgaaccattccttctt
ggagaggcccatgaatggaaccagagcagagcccaagatgctatgcatgatcgccgctct
ccaattattatcgataatacaaacattcaagcctgggagatgaagccatatgtcaaaatg
gccttggagcgaggatacaaagtcgacttctgtgaacctgacaccagctggaagttggat
ccttatgagcttcagaggagaaacaagcacggggtttcccaggagaagatcgcgcggatg
ctggatcgcttttcattccccatttccatagacactgtcctgagttcccaggagccgcct
cacatcgaccagagacatcgaccagagcagccgcagacgatgagggggagcagagatctc
cagtag

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