Hippoglossus stenolepis (Pacific halibut): 118106723
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Entry
118106723 CDS
T08308
Symbol
cntn5
Name
(RefSeq) contactin-5 isoform X1
KO
K06761
contactin 3/4/5/6
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
hsp04515
]
118106723 (cntn5)
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
hsp00537
]
118106723 (cntn5)
Cell adhesion molecules [BR:
hsp04515
]
Immunoglobulin superfamily
Contactins
118106723 (cntn5)
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
hsp00537
]
Others
118106723 (cntn5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
Ig_2
ig
fn3
V-set
Ig_C17orf99
Ig_5
Ig_DSCAM-DSCAML_C
Pur_ac_phosph_N
C2-set
fn3_4
Motif
Other DBs
NCBI-GeneID:
118106723
NCBI-ProteinID:
XP_035011365
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All DBs
Position
4:4302591..4406327
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AA seq
1103 aa
AA seq
DB search
MGSPWKPLLLLSVISGLSDFARAVAARPISYAALLRMKQDSSSSVLNSRSRPRQHHGDGG
GGGGLVTPDWPPFSSHPLSALSLLSSQEDYQSEESEEFGPVFILEPDDVIFPLDSTEKKV
VMQCDARGNPPPTYSWFINGTEVVEEADYRYSLIDGNLIITNASEISDYGKYQCKAENRF
GSILSRDALLQFAYLGAFSGKTRGGVSVREGQGVVLMCTPPPHSPEIVYSWVFNEFPSFV
AEDSRRFISQDTGNLYISKVQPSDVGSYICLVKNTVTNARVLSPPTPLTLKTDGVMGEYE
PKIEVHFPTSVLAAKGVTVRLECFALGNPVPTITWRKINGNIPKKARLRKSQAVLEIPNI
QLDDSGTYECKAENPRGGTSFKGQLQVYTFPQWVRMINNTQMDSGEKLHWECKATGRPRP
TYLWLRDGLPLTPQGHVVVMNGDLTIHNAQRTDSGMYQCVAENKYGAIYSSAELTILASP
PVFVPNPVRVIATLGKDVSLECKPRASPKPRVTWKRGDRRIQPNKRIMLLRNNTLRIVNS
SRADEGNYVCLAENQFGSAEMTAMLWVKEAMRVELSPVRVEVTVGESVVLSCKATHDTSL
DVAFQWLFNQRPINFQQDGGHFEYIQTVRARQSSTVDLMIRSILLRHAGKYGCRAQTSAD
TVFAEAELLVRGPPGPPGVVIVEEITDTTATLSWTRGLDNHSPISTYNLQARSPFSLGWQ
TVKTDPDPVTGNMESAIAVELNPWVEYEFRVVASNAIGTGDPSAPSRGVRTKEAVPSVAP
ANVSGGNGRRHELVISWEPVSEEFQNGEGFGYIVAFRANGTRGWKEKMVTSADSTTYKYR
DETFPPLTPFEVKVGVYNNKGDGPFSKVVVIHSAEGEPREAPTDVKAHSFSSSEIRVTWK
PPNPGPGRPRGYEVSYWKDMEQEESGKKQKTVKNETSMVLTRLDGNSVYLIIVKGFNSIG
QGPASAAVTAKTRKAPPAQPPANLMWIQEGNNVSLSWDPVKANDNESDVIGYMVLLKQEG
RGHNQVTRTINPSTMLSLPEGGTYIMEVRALSEGGEGAVSSQVRVVTSSGVRAKSNQCSV
HCLPRSLAWTALLLVLLVPSASW
NT seq
3312 nt
NT seq
+upstream
nt +downstream
nt
atggggtcaccatggaaaccacttctcctcctgtctgtcatcagtggcctttcagatttt
gcaagagctgttgcagcacggccgatatcgtacgccgcactgttacgaatgaaacaagac
agctcttcgtcagtgctcaactcgcgcagccgacctcgacagcaccacggcgacggcggc
ggcggcggcgggctggtgactcctgactggcctcctttctccagtcaccccctgtcagcc
ctgagtctgctcagctctcaggaggactaccagagtgaagaaagtgaagagttcgggcct
gtcttcatcctggagccggacgatgtcatttttcctctggattctaccgagaagaaagtg
gtgatgcaatgcgacgcacggggaaatccgccgcctacgtacagttggttcatcaacggg
acggaggtggtggaggaggcagattaccgctacagcctcattgacggaaacttgattatc
accaacgcgagtgagatctctgactacgggaagtaccagtgcaaagcagaaaaccgcttt
gggagcatcttaagtcgagacgctctgctgcagtttgcatatctgggagctttcagcgga
aagaccagaggtggggtctccgtacgtgaaggccaaggtgtggtgctcatgtgcaccccc
cctcctcattcaccagagatcgtctacagctgggtgttcaacgagttcccctccttcgtc
gccgaggacagtcgccgcttcatctcccaggacacggggaacctgtacatctccaaggtg
cagccctctgacgtaggaagctacatctgcctggtgaagaacacggtgacaaatgcacga
gttctgagccccccgacacccctgacactgaaaaccgacggtgtcatgggtgaatatgag
cccaaaattgaagtgcatttccctacatctgttctggctgccaaaggagttactgtcagg
ctggaatgctttgctctggggaatccagtgccaacaatcacatggaggaagataaatggc
aacatccccaagaaggcgcggcttcgcaagtcgcaggccgtgctggagatccccaacatt
caactggacgactcggggacgtacgagtgcaaagcggagaacccgagagggggcacgtcc
ttcaaaggacagctgcaggtctacaccttccctcagtgggtcagaatgattaataacacc
cagatggatagtggagagaagctccattgggagtgcaaggccacggggaggccccggccc
acctatctctggctccgcgacggtctgcccttgaccccccagggtcatgttgtggtaatg
aacggagacctgaccattcacaacgcgcagcggacggactcggggatgtaccagtgtgtc
gcagagaacaaatacggggccatctactccagtgctgagctgacgattctagcgtcgcct
cctgtcttcgtcccgaaccccgtccgggtcatcgccacgctcggcaaagacgtgtcgctc
gagtgcaaacccagagcgtcgcccaagccgcgggtaacgtggaagagaggagacagacgg
atacaaccgaataaaaggattatgttattgcggaacaacactctgagaattgttaactcc
agccgagcggacgagggcaactacgtgtgcctggcggagaatcagttcggctcggcagag
atgacggccatgctgtgggtaaaagaggccatgcgtgtggagcttagcccggtcagggtg
gaggtcaccgtgggcgagagcgtggtgctgagctgcaaggcgactcacgacacctcgctg
gacgtggccttccagtggctcttcaaccagagacccatcaacttccagcaggacggcggc
cactttgaatacatccaaaccgtaagagcaagacagtcctccacggtggatctgatgatc
aggagcatattgctgaggcacgctgggaagtacgggtgccgggcccagaccagcgctgac
acggtgtttgccgaggctgagcttcttgtgcgaggtcctcccggaccccccggagtggtg
atcgtggaggagatcaccgacaccacagccaccctgtcctggacccgtggcctcgacaac
cacagccccatcagcacctataatttacaggcccgcagcccattttcattaggctggcaa
actgtcaaaacagacccagaccctgtgaccgggaacatggagtcggccatcgctgtggag
ctcaacccctgggtggagtacgagttccgggtggtggcgagcaacgcgattgggaccgga
gatcccagtgcgccttcgaggggagtgaggactaaagaagcagtcccatcagtggcacca
gcgaatgttagtggtggaaatggccgcaggcatgaactggtgatctcatgggagcctgtg
tctgaggagttccaaaacggcgagggcttcgggtacatcgttgcttttcgcgccaacggg
acccgaggctggaaggagaagatggtgacttcagccgactcgacgacgtacaagtaccga
gacgagaccttccccccactcaccccgttcgaggtgaaggtcggcgtgtacaacaacaag
ggagacgggccgttcagtaaagttgttgtcatccactctgctgagggggaaccgagggaa
gcaccaaccgatgtgaaggctcacagcttttcttcatcggaaatcagggtcacctggaaa
cctcccaaccccggccccgggagaccgagaggatacgaggtcagctactggaaagacatg
gagcaggaagagtcgggaaagaaacagaaaaccgtgaaaaacgaaacatccatggtgctg
acgcgactggacggcaacagtgtgtatctcatcatcgtgaaagggttcaacagcatcggc
cagggtcctgcgagcgctgccgtcacggccaaaaccaggaaggcccctccggctcaacct
cctgccaacctcatgtggattcaggagggcaacaacgtgtctttgagctgggacccggtg
aaggccaacgacaatgaatcggatgtcatcggttacatggtgttgctcaagcaggagggc
agaggtcacaaccaggtgacccgaaccatcaacccgtccaccatgctctcactgccagag
ggaggcacctatatcatggaggtgcgtgccctcagcgaaggaggagagggagccgtcagc
tcccaggttcgagtcgtcacctcctccggtgttcgagcaaaaagcaaccagtgctcggtg
cactgtctgcctcggagcctagcatggacagcactgctcctggttcttctggtgccttca
gcgtcctggtga
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