Hippoglossus stenolepis (Pacific halibut): 118106778
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Entry
118106778 CDS
T08308
Symbol
chs1
Name
(RefSeq) chitin synthase 1
KO
K00698
chitin synthase [EC:
2.4.1.16
]
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp00520
Amino sugar and nucleotide sugar metabolism
hsp01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
118106778 (chs1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
hsp01003
]
118106778 (chs1)
Enzymes [BR:
hsp01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.16 chitin synthase
118106778 (chs1)
Glycosyltransferases [BR:
hsp01003
]
Polysaccharide
Structural polysaccharide
118106778 (chs1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Chitin_synth_2
Glyco_trans_2_3
Glyco_tranf_2_3
ChitinSynthase_IV_N
FliL
Motif
Other DBs
NCBI-GeneID:
118106778
NCBI-ProteinID:
XP_035011461
LinkDB
All DBs
Position
1:17907900..17931500
Genome browser
AA seq
1420 aa
AA seq
DB search
MEELKYRGKKREGRHRDTWDPFQLNPIGAEKESKRRCFQLAQYLVAVIVGLAVLTSAVVS
KGSLLVLSTMSSPTSLRSPKEKQFYMLMLVFCLVFPNFLMLFKSLWKCAFKSFIQPNMKT
LFFVCAIECLVSLGTSVLVLVVMPQFDVLTNLFISGGVCIVSAILQIVFRLQRKTWKIVF
PLCSLILTLAGYCLLGVDFYVRVSSYVDRQSPNCFIYVGLGIFSSLLISLCWWENPLQAT
NQMQEKLSELDGFRDFVFVISSILRIIVIGGVYLIYYVLIDKSIVWADFNMQNDDWLLLQ
TGLGLLFVQAFCSAACHWFGVVACKIHAVRMSFALPVCCAGPATLLLGLILFITEVDKLK
GAQHGSIQEFCESLVHLSQTNTTPVVILEITRSICRTSLNSYYLQWPFSMLALEGVCMWS
GFVTCTYYVWKIKVQRIERTSQLFVRRLYESAFIDLSLLLNTKMKVPRARNQESHDDIQE
CVIYLCATMWHETYDEMLKILTSMFRLDRYRGDPKEEHKDCFDFECHIYVDDAFMTDEDT
KKRLVNTYVDDLVDVVIEVYRVFTNKEPDDVSIIETPYGGRLMFVMPEGNMLYVHLKDKG
LIRNKKRWSQIMYMYYLLGWKGYIVKNPQKIPRQNNPCRASLISLDGESFLLPQYDNDYK
RKLISDENTYILALDGDTDFQPKAVILLIDRLRMYENVGAACGRIHPTGMGPMVWYQKFE
YAVGHWLQKTAEHVFGCVLCSPGCFSLFRGSALMDDNVLKRYTTTATRAAEYVQYDQGED
RWLCTLLLQQGWRVEYNAASDAYTNSPQEFKEFYNQRRRWGPSTLANTLDLLHSGGETVK
KNSSISRLYIFYQMFSVGSSILGPASVTLMIAGAFQFVFKITGTLSIVIASLPPVFYIIV
CFVAKPNNQITIAAIMSVLYAFLMTASLFSIIGDMVIQGTFLTPTGVFLVSMTIMYLVTA
LLHPEEFVMIVYGLMYFICIPSGYLLLTIYSLVNMHIVTWGTRESTKGREVKKNTNVMCD
RNCTICCWDMKCQITQETENLMLQQITGQSAQHAPNSLLTNQETTQQATVNLELQVKPDT
NMEETFERAQASPTDKHNKTNRDRDNDTDYSSSDDSTEKKSLSMSAIDDDDDFSLTGVPE
ETEELHVSDWVKPVKEEFLKKLTYANMRRNLQAQIRYTLRNKNQDDLCEELVLMLTDTLN
GELSDVGPEDVLTKSQLEELQYALTERARRIIKTSQLNRLEKRVMRAIEKTLTAPQVQKL
DEGEQDFWNKLLERYLKPIVDVKAHQEEVTRELKSLRNKAVFLYFIINVLWVVATFFLQA
IGNDVISIKIPKYYPNGTEADDFLKVEPLSLMFLLSFAVLLLMQFMAMLYHRVYTLIHVV
SYRSTEKDYKQKDDEEDDDVLIMENHSANGLVITSEDLSH
NT seq
4263 nt
NT seq
+upstream
nt +downstream
nt
atggaagaactcaaatacagaggaaagaaaagagagggaagacacagggatacatgggat
ccattccagctgaacccaatcggagctgagaaggaatcgaagagaagatgttttcagctg
gcccagtacctggtggctgttattgtggggttagccgtcttgacaagtgctgttgtctca
aagggctctctcctggtgttgtccaccatgtcgtctccgacctccttgcgcagcccaaag
gaaaaacagttctacatgctgatgctggttttctgcttggtcttccccaacttcctgatg
ttgttcaagtccctgtggaaatgtgccttcaagagcttcatacagcccaacatgaagacg
ctgttctttgtttgtgctatcgagtgtctggtgtctctgggcacttcggtcctggtgctc
gttgtcatgcctcagtttgacgtgctgactaatctcttcatcagtggaggagtctgcatt
gtgtcggccattctgcagattgttttcagactacaaaggaaaacatggaaaattgtcttc
cctctatgttccctcattctcactcttgcaggttactgtctcctgggagttgacttctat
gtgcgtgtgtcatcatacgtggatagacagagccccaactgctttatctatgttggactt
ggaattttctcttcactcctcatctccctctgctggtgggaaaatccactgcaagctact
aaccaaatgcaggaaaaactgtcagaactggacggattcagggactttgtgtttgtcatc
agcagtattctgaggataatcgtgataggaggagtatacctgatatactatgtgcttatc
gataagtctatcgtctgggctgactttaacatgcagaatgatgactggctgttactgcaa
acaggactggggctgttattcgtacaggcgttctgctcggcagcctgccactggttcggg
gtggtggcctgtaagattcatgcagtcaggatgagctttgcgttgccagtatgttgcgct
gggcctgcaaccctactgttgggattgatacttttcataaccgaagtagataaattgaag
ggcgcacaacatgggagtatccaagagttttgtgaaagcttggtccacctgagtcaaacg
aacacaacccctgtggtcatactcgagattaccaggagcatctgtcgtacttcacttaac
agctattacctgcaatggcccttttcaatgctggcactggagggagtgtgtatgtggtca
ggctttgtcacatgtacctactacgtgtggaagatcaaggtgcagcgtatcgagagaacc
tctcagctctttgttcgtcgtctctatgaatctgctttcattgacctgtctctgctactc
aacaccaagatgaaggtgccacgagcccgaaaccaggagagccatgatgatattcaggaa
tgcgtgatctatctttgtgccaccatgtggcatgagacctacgatgaaatgctcaagatt
ctcacctccatgttcaggttggaccgctatcgaggcgatccaaaggaggagcataaggac
tgttttgactttgagtgtcacatttatgtggacgatgccttcatgactgacgaggacacg
aagaagaggctggttaatacttatgttgatgacttggtcgatgttgtcatagaggtttat
agggtgtttaccaacaaagagccagacgacgtgtcgatcattgagactccctacggaggc
aggctgatgtttgttatgcctgaaggcaacatgctttatgttcacctaaaagacaaaggt
ctgatcaggaacaagaagagatggtcccagatcatgtatatgtattatctactcgggtgg
aagggttacattgtcaagaacccccagaagatcccacgtcagaataacccatgcagagcc
agtctgatctctttagatggtgaaagtttcctgttgcctcagtatgacaacgactacaag
aggaaattaatctcagatgaaaacacttatatcctggctctagacggagacactgacttc
caacccaaagctgtgattctgcttatagacaggttgagaatgtatgaaaatgttggtgca
gcatgtggtagaatccatcctaccggcatgggtcccatggtgtggtaccagaagtttgag
tatgccgtgggccactggctccagaagacagcagagcatgtgtttggctgtgtgctgtgc
agtccgggatgctttagtctgtttagagggtcggctttgatggacgacaatgtcttaaag
agatacacaacaactgcaacgagagctgcagaatatgtgcaatatgaccaaggggaggat
cgttggctgtgtactctgttactgcagcagggatggcgcgtcgaatacaatgctgcatca
gatgcatacaccaactcaccgcaggagttcaaggagttttacaaccagaggagacgatgg
ggaccatcaacactggctaatacactggaccttctgcacagtggtggagagacagtgaag
aagaactcatcaatctccaggctttacattttctaccagatgttttcagttggttcctcg
atccttggcccagcatcagtgactctcatgatagcaggtgccttccagtttgtcttcaaa
atcacaggaacgctttccatcgtcatcgccagccttccccccgtgttctacatcatcgtc
tgttttgtagccaagcctaataatcaaataaccatagctgccattatgagtgtgttgtat
gcgttcctcatgaccgcatccctcttctccatcatcggtgacatggtgattcagggcacc
ttcctgacccctactggtgtgtttttggtttctatgacaatcatgtacttggtgacagcc
ttactacacccagaggagtttgtgatgattgtctatggtttgatgtacttcatctgtatt
ccaagtggatatctcctactgaccatctactcactggttaacatgcacattgtgacctgg
ggcacaagagaatccactaaaggaagagaagtgaagaagaatacaaatgttatgtgtgac
agaaactgtacaatctgctgttgggacatgaaatgtcagataacacaggaaaccgagaat
ctgatgcttcaacaaatcactggccagagtgcacagcatgccccaaactctttgctgacc
aaccaggaaacaactcaacaggcgactgtaaacctggagcttcaagtcaaacctgacacc
aacatggaggaaaccttcgaaagagctcaggcatctcccacagacaaacacaacaagaca
aacagggacagagacaatgacactgattacagtagcagtgatgacagcactgaaaaaaag
agcctgtcaatgagtgcaatcgatgacgatgatgatttctcactgactggtgtcccagaa
gaaacagaggagctccatgttagtgactgggtgaagccggtgaaagaagagttcttgaag
aagctgacttacgctaacatgagaaggaatctacaagcacaaatacgatacacacttcgc
aacaaaaatcaggacgacttgtgcgaggagttggtcttgatgttgaccgatacgctcaat
ggagagctcagtgatgtagggcctgaagatgttctgacaaaaagccagctggaggagtta
caatatgcactaacagagcgggctcggcgtatcattaagaccagtcaattgaacagactg
gagaagagagtgatgagagccattgagaaaacactcaccgccccgcaggtgcaaaaacta
gatgagggtgagcaagacttctggaacaaactactcgagcgctacttgaagcccatcgtt
gacgtgaaagcacatcaagaggaggtgaccagagagctgaagtccctgcgcaacaaggcc
gtcttcctgtacttcatcatcaacgtgctgtgggtggtagctaccttcttcctgcaggcc
attggaaatgatgtcatcagcatcaagatccctaaatactatccaaacggaactgaagct
gacgatttcctcaaggtggagccactcagtttgatgttcctgttgtcttttgctgttctg
ctccttatgcagttcatggctatgttatatcacagggtctacactctgatccacgtagtg
tcctatcgcagcacagagaaagactacaaacagaaggatgatgaggaggatgatgatgtc
ctcattatggagaaccacagtgcaaatggactcgtcattaccagtgaagacctgagtcac
tga
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