Hippoglossus stenolepis (Pacific halibut): 118106787
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Entry
118106787 CDS
T08308
Symbol
ddx21
Name
(RefSeq) nucleolar RNA helicase 2
KO
K16911
ATP-dependent RNA helicase DDX21 [EC:
5.6.2.7
]
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
hsp03009
]
118106787 (ddx21)
03036 Chromosome and associated proteins [BR:
hsp03036
]
118106787 (ddx21)
Enzymes [BR:
hsp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
118106787 (ddx21)
Ribosome biogenesis [BR:
hsp03009
]
Eukaryotic type
Pre-60S particles
Helicases
118106787 (ddx21)
Chromosome and associated proteins [BR:
hsp03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
118106787 (ddx21)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
GUCT
Helicase_C
ResIII
CMS1
ERCC3_RAD25_C
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
118106787
NCBI-ProteinID:
XP_035011472
LinkDB
All DBs
Position
1:complement(17932585..17942146)
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AA seq
755 aa
AA seq
DB search
MPSKIVFDTEDLVQEEEMDTVSEAKALKNKNKEAKKLKKKQQTEEQEEQEDPDCEPPAPK
KKKKKDKLAGHEVNGHDEVTDLNDNINGIETPKKKKTKTNTEGDTEKKKKQKKATVEAAT
NGHSTLKTPVQTPTQTPIPSGEESASDNEKDTETPEQKEGAFSKFRISDVTINKLKARGV
TFLFDIQVKTFNPVFDGEDVIAQARTGTGKTFSFAIPLVEKLQRESLPPTRGRAPKVLVL
TPTRELAIQVARDFKDVANKLFITCFYGGSSYNPQIDAIRNGIDILVGTPGRIKDHLQNS
KLDLSQVKHVILDEVDQMLDMGFAEQVEEILATSYEKDGESNPQTLLFSATCPAWVYQVA
KKYMRPECKHVDLIGKKTQKAATTVEHLAIACHWSQRAAVIGDVIQVYSGRHGRSIVFTE
TKKEANELSMNASIKQSTQTLHGDIPQKQREITLKGFRNGTFEVLVATNVAARGLDIPEI
DLVVQCSPPKDVESYIHRSGRTGRAGRPGVCICFYQRKEEDQLRYVENKAGITFRRVGVP
TANDIIKSSSKDAVKFLDSVPVTAIGYFRASAEKLIEEKGAVDALAAALAHISGATSLEQ
RSLLNSDTGFATMTLVCSQEMHNLGYAWRSIKEQLGEDFENHIQRMCFLKGKTGVCFDLP
VDKVKQMQEGWKDGRRWQLSAAEELPDLEEKQHNNRGGDRGFGNGNRGDRGGGFRGGRGR
SFGGNGGRSNGFRNGGGVGAGRGVHKRSFGEAFDY
NT seq
2268 nt
NT seq
+upstream
nt +downstream
nt
atgccatctaagatcgtatttgacaccgaggatctggtccaggaggaggagatggacacc
gtcagcgaggcgaaagccctgaagaacaagaacaaggaggccaagaagttgaagaagaag
cagcagacggaggaacaagaggagcaggaggacccagactgtgaacctccagcaccaaag
aagaaaaagaaaaaagacaagctggcaggtcacgaagtgaacggccatgatgaggtcaca
gacctgaacgacaacatcaacggtattgaaacaccaaagaagaagaagactaagacaaac
actgaaggagacacagagaaaaagaagaagcaaaagaaagcaaccgtagaggcagcaacc
aatggacattccaccctgaaaacccctgttcagacacccacacagacaccgataccatcg
ggtgaagagtcagccagtgacaacgagaaagatacggaaacaccagagcagaaggaaggg
gccttttccaagttcaggatctccgacgttaccatcaataaactgaaagctcggggagtc
actttcctgtttgacattcaggtgaagacatttaatccagtgtttgatggagaagatgta
atcgctcaagctcgaacaggaacaggaaagactttctcctttgccatcccattggtggag
aagcttcagagggaatcattgccgccgaccagaggccgagctcccaaggtcctggtgttg
actccaaccagagagttagcaatccaggtcgctagggacttcaaagacgtcgccaacaaa
cttttcatcacctgtttctacggcggcagctcatacaacccacagattgatgccatccgt
aatggtatcgatattttggttggaacccctggtcgtatcaaggaccacctccagaacagc
aagcttgacctgtcacaggtgaagcacgtcattctggatgaagtcgaccaaatgttggac
atgggatttgcggaacaggttgaagaaattttggctacatcatatgagaaagacggcgaa
tccaatccccagacgctgctgttttcagccacctgccccgcctgggtctaccaagtggcc
aagaaatacatgagaccagaatgcaaacatgttgacctgatcggcaagaaaacacagaaa
gctgcaacaactgtggagcatcttgccatcgcctgtcactggtcacagcgcgcagccgtg
atcggtgatgtcatccaggtttacagtggcagacacggccgaagcattgtgttcactgag
acaaagaaagaggccaacgaactctccatgaacgcatccatcaaacaaagtacacagacc
ctccatggtgatattcctcagaaacagagagagattaccctgaagggcttcaggaatggg
accttcgaggtcctggttgccaccaatgttgcagctcgtggattagatatccctgaaatc
gacctggtggtccagtgctctccacccaaggatgtggagtcatacatccatcgttcagga
cgtacaggccgagcaggcaggcctggagtctgcatctgtttctaccagaggaaagaggaa
gaccagctgcgctacgtagaaaacaaagcgggtatcacattcagacgagttggcgttccc
actgccaatgatatcatcaagtcatcaagcaaggatgctgtcaagtttttggactcagtt
ccggtcacagctattggatactttagagcttcagctgagaagctgatcgaggagaaagga
gccgtcgatgcactcgctgctgcccttgcccacatctctggagccacaagtctggagcag
aggtcactgctgaactctgatactggtttcgccaccatgacgttggtgtgttctcaggag
atgcataatctgggttacgcttggagaagcatcaaagaacaacttggcgaagactttgag
aaccacattcaaagaatgtgcttccttaaaggcaaaacgggagtttgtttcgacctccca
gttgacaaagtcaagcagatgcaggagggctggaaggatggtcgccgttggcaactgtcc
gccgccgaggagctcccagatctggaggagaagcagcacaataaccgcggcggcgacaga
ggctttggcaacggtaaccgtggcgacagaggaggaggattcagaggcggaaggggacgt
agtttcgggggaaatggcggccgcagcaacggattcaggaacggtggcggcgtcggcgcc
ggcagaggagtacacaaacgcagcttcggcgaagcttttgattactga
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