Hippoglossus stenolepis (Pacific halibut): 118107140
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Entry
118107140 CDS
T08308
Symbol
il16
Name
(RefSeq) pro-interleukin-16 isoform X1
KO
K22628
interleukin 16
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp04060
Cytokine-cytokine receptor interaction
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
118107140 (il16)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
hsp04052
]
118107140 (il16)
Cytokines and neuropeptides [BR:
hsp04052
]
Cytokines
Interleukins
118107140 (il16)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
Motif
Other DBs
NCBI-GeneID:
118107140
NCBI-ProteinID:
XP_035011512
LinkDB
All DBs
Position
1:30494811..30531482
Genome browser
AA seq
1597 aa
AA seq
DB search
MIDYERPSPLGFGPAGRSVLVPDLPAHTHAHTLTAMPQRYSHQRRKASTAAARRMERRRR
EQGKSNNNNPTSSHNHRSKKLAMLSRSLILCHSKTNDDGVEERNAGDMADGCRTQGSSWR
TDVTAGVQTGYRDTENGHCRTTQQSDLEKRGESKAEHQLHHTNTLRENKRSMRRSFSIKE
SSIWRMCVATGPAEDVCGPQMADNSVQTQNKYTNVEPGRTGGNLHRGCSFPSPDKLAPFN
GHFLSGSAWMEGEAVRSVHIKPYSEDVSTHEDPVHSLTKSPQHPALISPSDPISLPGYTD
EERVANNNHLKLPIPEVNEEKCWGTEKTEQSPPGQTASNRTRSNSTSVQPYWIGDLDSII
MKTPDLYSSHPHGSSGIYGNRKSLSQQLEFPHTTTQPVHRPSRSLSSAQLVHSCSNVQQA
FIICNIVLMKGHGKGLGFSIVGGRDSMYGPMGIYVKTIFRGGAAAADGRLQEGDEILELN
GESLPGLTHDEALHKFKQIKKGMLSLVVRTSLRVGALCGQAQVAQLCRSRSLSSTTGMAR
VSADMGDFNYLNTCSNTLSVPGQPAKPRDRIMMEIILHKEAGVGLGIGLCCVPSGDGCPG
IYIHTLSPGSVAHMDGRLRCGDEIMEINDTVVYNMALNDVYTVLSQCTPGPVHIIISRHP
DPKVSEQQLNDAITLAVESSKLRKDKSQWSIDGLRRLESCSHSRQRCEHCLERSFSQLTV
RRAQKTMTRSCSDNTNSHHYNRCLNMHNLHNTHHQPSSRVHSLDTPKSVTDTWSDNRLSV
PMYPDEDYNIPYNSPPANISSQQALDLAFRGSKSNCRMRAVPRRYCWPQDVTSEEGYNGD
SSGSSRGSPVRDEGLESSSHTSCQQEGERIREQLEGSKDDFTHPDTAACTDDSHIEDSSV
VLCSQPKRGALRRQARIEQRSQEQLQDPWIRLSDTSPEKLSETHRQHAADSTRAVDLKSA
TMSDEESPAKLNGTVTDVTSDPQSNMTPENTCETPESKRGPPVAPKPTWFRQSLRKIRDE
KDQKKQVKPAEQRPAVGFSRSFAIRSASSAANLSIKQKIHSFETFSSPESPDKGGHRRPV
SPSTSLPLVEKEARRDHAPLEDCGNSKHGITKEIQSNQTACVQETEHTVSTSPSAITSSS
SQACLQTTEKSCEDEPPSVQTETDLPLTDSISADLDPGINDSHSPPAHDDSNVSPSKQLS
ELEKVDLSEVLPPVTSIRSNQEDGESPPEGTEGGAALSQEKLQSTSLSAGVPTDSTSLRS
LEGESFGKILAFSNQVSQALMRSLPMYSGSSDPRSPNLQDPSSVDSTNPGCDPAPAVDSS
DRGFSVSLATLRECTIEREEGGSHDDAGVTSASAHTVISAISSQEIQRMIQEVTILDQET
LKQLVDIHVVILHKEEGAGLGFSIAGGCDLETKALTVHKVFPSGLAAQEGTIQKGDEVLS
INGQTLQGVTHADATAAMRQARNLKLAVVVICKRAEEGGREGGREGGGCKSEEPNASVEE
QAAPVRVELDKGAGGVGFTLEGGKGSIHGDRPFVINRIFAGGAAEQSGLQCGDELLQVQG
SSLQDMTRFEAWNMIKALPEGPITLVIRRREQQGATE
NT seq
4794 nt
NT seq
+upstream
nt +downstream
nt
atgattgactacgagcgtccctctccattaggcttcgggccggctgggaggagtgtgctg
gttcccgatctcccggcacacacacatgcacacacactgacggccatgcctcaaagatac
tcccaccagaggaggaaagccagcacagcggctgcgaggaggatggagaggagacgcagg
gaacaggggaaaagcaacaacaacaacccaactagcagccacaaccaccgctccaagaag
ctggccatgctctccaggtccctgatcctgtgtcactccaagactaatgatgacggcgtg
gaagagaggaatgctggggacatggcagacgggtgcaggacgcagggctcaagctggagg
acagatgtgacagctggggttcaaacagggtacagagatacagagaatggacactgtagg
acgacccagcaatcagacctggagaaaagaggagagagcaaagcagaacatcagctccat
cataccaacacactcagggagaataaacggagcatgaggagatccttcagcatcaaggag
agcagtatttggaggatgtgtgtagccacagggcctgctgaggacgtgtgtggaccacaa
atggcagataacagtgttcagacacagaacaaatacactaatgtggagccagggaggact
ggagggaacctacacagaggctgcagcttcccgagcccagacaagctggcaccctttaac
ggacactttctaagtggcagtgcttggatggaaggggaggcagtgaggagtgttcacatt
aaaccctacagtgaggacgtttccacacatgaagaccctgtccattcactgactaagagc
ccacagcacccggctctcatttccccatcagacccaatatcattgcctgggtacacagat
gaagaacgtgtagccaacaacaaccacctcaagttacccatcccagaggttaatgaggag
aaatgctggggaacagagaagactgagcagagcccaccaggacagacagccagcaacagg
acacggtcaaattcaaccagtgttcagccatactggatcggggatttggacagcatcatc
atgaagaccccggatctgtacagcagtcatcctcatgggagtagtggaatatatggaaac
aggaagtctttgtcccagcagctggagtttcctcacaccaccacacagcctgtgcaccgt
ccctcccgctctctcagctctgcccagctggtgcactcctgcagcaacgtgcaacaagcc
ttcattatctgtaatatcgtgctgatgaagggccacggcaagggtctgggattcagtatt
gtgggcgggagggacagcatgtatggaccaatgggaatctatgtgaaaaccattttccgt
ggaggagcagccgctgctgatggaaggctgcaggagggtgatgagatcctggagctgaac
ggagagtctcttcctggtttgactcatgatgaagccctgcacaagttcaaacaaattaaa
aagggtatgctgtctctcgtggtgaggaccagcctacgtgtcggggccctgtgtggtcaa
gcgcaggtggctcagctgtgcaggtcgcgctccctcagctccaccactggcatggccagg
gtcagtgctgacatgggagacttcaactacctcaacacctgcagcaacacactgagcgtc
cccggtcagcctgctaaacccagagaccgcatcatgatggagatcatcctgcacaaagag
gctggtgttggtctgggtattggactgtgctgtgtcccatctggtgacggatgtccaggg
atctacatccacaccctctctcctggatctgtagcacacatggatggtcgactccggtgt
ggagatgagatcatggagatcaacgacactgtggtttacaacatggcgctgaatgacgtc
tacacagtcctgagccaatgcacaccaggtccagtccacatcatcatcagtcgccatccc
gaccctaaagtatcagagcagcaactgaatgatgccatcactctagcagtggaaagcagc
aaactgaggaaggataagagccagtggagtattgatgggctgcgcagactggagtcttgc
tctcacagtcggcagaggtgtgagcattgtctagagaggagtttcagtcagctgacggtt
cgacgagcacagaagaccatgacccgctcctgtagcgataacaccaacagccaccactac
aaccgctgcctcaacatgcacaaccttcacaacacacaccatcagccatcatcacgtgtc
cacagcctggacacaccaaagtctgtgacagacacgtggtcggacaacagactgtctgtg
cccatgtatcctgacgaggactataatatcccatacaactctcctcctgccaatatctcc
agtcagcaggccctggatctggccttcaggggcagcaagtctaactgcaggatgcgtgct
gttccacgtcggtactgttggcctcaggatgtgaccagtgaggagggctacaatggagac
tccagtggttctagtcgaggatctccagttagagacgaaggactggagtcttcatcacac
accagctgccagcaggaaggagaacgaataagagaacagttagaggggagcaaagacgac
ttcactcatccggacactgctgcctgcaccgacgacagtcacatagaggattcatcagtg
gtgctctgctcacagcctaaaagaggagctctgaggaggcaggctcgtattgaacaacgc
tcccaagagcagcttcaggatccttggattcgcctttcagacacatcccctgaaaaactg
tccgagacccaccgccaacacgccgctgacagcacacgggccgtcgacctcaagtctgcc
accatgagcgatgaagagagccccgctaagctcaatggtacagtcacagatgtgacttca
gatcctcagtccaacatgactcctgaaaacacgtgtgaaactccagaatcaaagaggggg
cccccggtggcacccaagcccacctggtttcgccagagtctgaggaaaattcgagatgag
aaggaccagaagaagcaagttaaacccgcagagcagaggcctgctgtgggtttcagcaga
agctttgcaatcagatctgcctcatctgcagccaacctgtcaatcaaacaaaagatccac
tcatttgagactttttccagtccagagagtccagacaagggggggcataggaggcctgtg
tccccttccacctcccttcctctggtggagaaggaggccaggagggatcatgccccactt
gaagactgtgggaacagcaaacatggaatcaccaaagagatccagtcaaaccaaactgca
tgtgttcaggagacagaacacactgtctccacgtcaccctctgctatcacctcctcctct
tctcaagcttgtcttcaaacaacagaaaagtcctgtgaagatgaacctccctctgtccag
acagagaccgatctcccactcactgactccatcagtgctgatctggaccctgggataaat
gattctcattcccctccagctcatgatgacagcaatgtctcaccatccaaacagttgtct
gagctagagaaagtggatctcagcgaggtcctacccccggtgacatctattagatccaat
caagaagatggggaaagtcctccagagggtacggaggggggtgcagcactgagccaagaa
aagctgcagagcacaagtctgagtgctggtgtccctacagacagtacctccctgagaagc
ctggagggagagagtttcgggaaaattctcgccttcagtaaccaggtttcacaagcattg
atgcgttctcttcccatgtactccggctctagtgaccctcgctccccaaacctgcaggac
ccctcatcagtggattctacaaaccctgggtgtgatcctgctcctgcagtggacagcagc
gacagaggattctctgtcagcttggccacactgagagagtgcaccattgagcgagaggag
gggggatctcatgacgatgcaggagtcacttctgcttctgctcatactgtcatctcagcc
atctcttcccaggaaatacagaggatgatccaggaagtcacaattctggatcaagagacg
ctgaagcaactggtggacatccatgttgtgatcctgcataaagaggagggagcaggtctg
ggattcagcatcgctggaggctgtgacctggagaccaaagctctgacagtgcacaaagtg
tttcccagcggcctggcggctcaggagggcaccattcagaaaggagatgaggtgttgtct
ataaacggacaaacactgcagggcgtcacacatgccgatgccaccgctgctatgcgtcag
gcccggaatctgaagctggctgtggtggtcatctgcaagagagcagaggagggaggcaga
gagggaggcagagaggggggaggctgcaagagcgaagagcctaacgcttcagtggaggag
caggcagctccggtgagggtggagctggacaaaggagctggaggagttggttttactctg
gagggaggaaaaggctcaatccatggagacaggccttttgtcatcaacaggatctttgca
ggtggagctgcggagcagagcggtctgcagtgtggagatgagctgctgcaggtgcaggga
agcagtctgcaggacatgacaaggtttgaggcctggaacatgatcaaggctttacccgag
ggaccaatcacattggtcatcaggaggcgagagcaacagggagcgacagaatga
DBGET
integrated database retrieval system
