Hippoglossus stenolepis (Pacific halibut): 118107320
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Entry
118107320 CDS
T08308
Name
(RefSeq) transcriptional repressor CTCF
KO
K23195
transcriptional repressor CTCF
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hsp03000
]
118107320
03036 Chromosome and associated proteins [BR:
hsp03036
]
118107320
Transcription factors [BR:
hsp03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
118107320
Chromosome and associated proteins [BR:
hsp03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
118107320
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-C2H2_16
zf-H2C2_5
zf-C2H2_7th_ZNF462
zf-met
Zf-C2H2_ZNF451
zf-C2H2_jaz
LIM
zf-C2H2_6
zf-C2H2_15
RXT2_N
Zf-C2H2_ZNF451_C
zf-WIZ
Motif
Other DBs
NCBI-GeneID:
118107320
NCBI-ProteinID:
XP_035011526
LinkDB
All DBs
Position
1:complement(15586791..15593171)
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AA seq
767 aa
AA seq
DB search
MEGEVVSMEAAQAAALSAAGKVLTDDGEDLIQGASLAQQGEVAGNMEMMVMEGLDPTLLQ
MKTEVLEGGSTVTVTGGDEGQIITLQVVNMEEQAGAALGLGQLQLVQVPVTATSVEGLQA
TYVDASSINKDSEPVICHTLPLPEGFQVVKVGANGEVETVEHEELQAAHGELQGTTGEDV
EGGEAAEMEPPMAQDEPEWSKDPDYQPISSIRRGKKGKKSRLRYAEGDRDMDVSVYDFEE
DQQEGQLSEVNAEKVVGNMKPPKPTKIKKKGVKKTFQCELCSYTCPRRSNLDRHMKSHTD
ERPHKCHLCGRAFRTVTLLRNHLNTHTGTRPHKCQDCDMAFVTSGELVRHRRYKHTHEKP
FKCSMCDYCSVEVSKLKRHIRSHTGERPFQCSLCSYASRDTYKLKRHMRTHSGEKPYECY
ICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQHSFIETGKKCR
YCDAVFHERYALIQHQKSHKNEKRFKCDKCDYCCRQERHMIMHKRTHTGEKPFACSQCEK
TFRQKQLLDMHFKRYHDPNFIPTAFVCEKCNKTFTRRNTMLRHADSCTGESAGEENGTPT
PKKGRRGRKRKMQARADDEDEDDEEDDDDTEGDLDEAEEEDELLAEIEMEQAEPVVPIPA
PVEPPVKRKRGRPPKNKIDTAAIIRVEDEATGEVDDIIVKKEVGVEHDEQEDVTDDGVEQ
VVVGEGKSTIEMEELSHEEGTAEVAQLSGAPPNGDLTPEMILSMMDR
NT seq
2304 nt
NT seq
+upstream
nt +downstream
nt
atggagggcgaggttgtttccatggaggccgctcaggctgctgccctgagtgcagctgga
aaggtcctgacagacgacggagaggacttgatacaaggggcatctctagctcaacagggg
gaggtggctggtaacatggagatgatggtgatggagggtctcgatcccactctgctccaa
atgaagactgaggtgttagagggaggcagcacagtgactgttactggtggagacgagggt
cagatcatcacgctccaggtggtgaatatggaggagcaggcaggtgcagcattaggcctt
ggtcagcttcaactggttcaagtaccagttacagcaacatctgtagaggggctccaagcc
acgtatgttgatgcatcatctattaacaaggattcagagccagtaatctgtcacactctt
cccctgcctgaaggcttccaggtggttaaagtgggtgccaatggtgaagtggagaccgta
gagcatgaggagcttcaggcagcccacggggagcttcaggggacgacgggagaagatgtg
gaagggggagaagcagcagaaatggaaccgcctatggctcaggatgaaccagaatggtca
aaggacccagactatcagcccattagctctatccggagaggaaagaaaggaaagaagagc
cgtctacgctatgcagagggcgatcgggatatggatgtttctgtgtatgactttgaggag
gatcagcaggaagggcagctgtcagaagtgaatgctgagaaggttgtgggcaacatgaag
ccaccaaagcccaccaagatcaagaaaaaaggtgtgaagaagactttccagtgtgaactg
tgtagctacacctgtccaagacgctccaacctggacagacacatgaagagccacacagat
gagagaccacataaatgtcacttgtgtggaagagctttcagaacagtcaccctgctgagg
aaccacctcaatacacacacaggcactcggccacataaatgccaagattgtgacatggca
tttgtgaccagcggtgagttggtgcgtcatcgtcgctacaaacacacacacgagaaaccc
ttcaagtgctccatgtgtgactattgcagcgtggaggtgagcaagttgaaaagacacatc
cgttctcatacaggggagcgtcccttccagtgcagcctgtgcagctacgccagcagagat
acttacaagctgaagagacacatgaggacacattcgggtgagaagccatacgagtgctac
atctgccatgcccgtttcacacagagcggcaccatgaagatgcacattctgcagaagcac
acagagaatgtggcaaagttccactgcccacactgtgatactgtcatcgcacgcaagagt
gacctgggtgttcatttgcgcaagcagcactcttttattgagacgggaaagaaatgccgt
tactgtgacgctgtatttcacgagcgctacgctctcatccaacaccagaagtcccacaag
aatgagaaacgtttcaagtgtgacaagtgtgactactgctgcagacaggaacgccacatg
ataatgcacaagcgcacacacacaggggagaagccgtttgcctgcagccagtgtgagaaa
acattccggcagaaacagctcctggacatgcacttcaagcgctaccacgatcccaacttc
atccccactgcctttgtctgcgaaaagtgtaacaagacatttacacgcaggaacacgatg
ctgcgtcatgctgacagctgcacgggtgagagtgctggagaagaaaatggaacccctaca
cccaaaaagggtcgtcgtggcaggaagaggaagatgcaggccagggctgatgatgaagat
gaagatgatgaagaagatgatgacgacacagagggggacttggatgaagcagaggaagaa
gacgagctgctagctgaaatcgagatggaacaggctgaaccagtcgtccccatcccagct
cccgtggagccaccagtcaagaggaaacgcgggcggcccccgaagaacaagatagacacg
gctgccatcatccgtgttgaggacgaggccactggagaggttgatgacatcatagtgaag
aaggaggtcggagttgaacacgatgaacaggaggacgtcaccgatgatggtgtagagcag
gtggtggtcggtgaagggaagtcgaccattgagatggaggagttgtcccatgaagagggg
acagcagaggtagcgcagctgtccggcgccccgcccaacggagatctgacccctgagatg
atcctcagcatgatggaccggtga
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