Hippoglossus stenolepis (Pacific halibut): 118107678
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Entry
118107678 CDS
T08308
Symbol
cars1
Name
(RefSeq) cysteine--tRNA ligase, cytoplasmic isoform X1
KO
K01883
cysteinyl-tRNA synthetase [EC:
6.1.1.16
]
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
118107678 (cars1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
hsp01007
]
118107678 (cars1)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hsp03016
]
118107678 (cars1)
Enzymes [BR:
hsp01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.16 cysteine---tRNA ligase
118107678 (cars1)
Amino acid related enzymes [BR:
hsp01007
]
Aminoacyl-tRNA synthetase
Class I (G)
118107678 (cars1)
Transfer RNA biogenesis [BR:
hsp03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
118107678 (cars1)
Prokaryotic type
118107678 (cars1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1e
tRNA-synt_1g
tRNA-synt_1
Arc1p_N_like
TipAS
Motif
Other DBs
NCBI-GeneID:
118107678
NCBI-ProteinID:
XP_035011560
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Position
1:complement(960991..973552)
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AA seq
896 aa
AA seq
DB search
MSPETVRSSRDSAAVEESQVALSNAKHKTQTSGLRGPPVICVPHGCGAQTRWFRFPVLAC
NTLLLLLFFFFFRTRYCCISINPQLSCRPPQTQINEEATLAVALNDYLTSRSYLAGFSVS
QADHRAFKLLHRPPDPQHVHALRWYRHVAALQQDGPSESSMKAKRVQPPWSPPAGTDVPQ
LLLYNSLTRAKEPFVPQKGNRVTWYCCGPTVYDASHMGHARSYISFDILRRILRDYFKFD
VFYCINITDIDDKIIKRARQNYLLDQYKEKQPKAVQILQDVLSARDPFQVLLAETTDPDK
KQMLERLDAAVTAALKPLQAAMESGNEAVQPLAQALLESSKDLLSDWLDKQFGSQVTENS
IFSILPKYWEGEYHKDMEALNVLPPDVLTRVSEYVPEIVEFVKKVVSNGYGYDSNGSVYF
DTSKFDASQQHSYAKLVPEAVGDQKALQEGEGDLSISADRLSEKKSQNDFALWKASKPGE
PSWDSPWGKGRPGWHIECSAMAGSVLGESMDIHGGGFDLRFPHHDNELAQSEAYFDNDCW
VRYFLHTGHLTIAGCKMSKSLKNFITIKDALAKNTARQLRLAFLMHSWKDTLDYSSNTME
SAVQYEKFMNEFFLNVKDLLRAPTDITGRFEKWEAAEMELNNSFYDRKSAVHEALCDNMD
TRTAMEEMRVLVNQSNSYIASRKSAKLRPNRLLVESIAVYLTNMLKIFGTIEGSDPVGFP
VGGQGQSIDLESTVMPYLSVLSDFRERVRKIAREQKVTELLQLCDTVRDDTLPELGVRLE
DHEGLPTVVKLVDKETLLKEREEKKKMEDEKKRKKEEAARKKQEQEMAKLAKMKIPPCDM
FRKETDKYSKFDETGFPTHDAEGKELSKGQAKKLRKLYEAQEKLHNEFLQMNQNGN
NT seq
2691 nt
NT seq
+upstream
nt +downstream
nt
atgtccccggaaacggtccgatcctcccgtgactccgctgctgtcgaggaatctcaagtt
gctctttcaaacgcaaaacacaaaacacaaacttccgggctacgcggtccgccggtcatc
tgtgtcccccacggctgtggtgctcagacgcgttggttccggttcccggtgttagcatgt
aacaccctcctcctcctcctcttcttcttcttcttccggacacgttattgttgcatcagc
atcaaccctcagctgtcatgtcggccgccgcagacccagataaatgaggaggccacgctg
gccgtggccctgaatgactacctaacctcacgcagctacctggctgggttcagcgtctcc
caggccgaccacagggcctttaagctcctccacaggcccccagacccacagcatgtccac
gctctgcgctggtacagacacgtagccgccctgcagcaggacggcccctctgagagcagc
atgaaggcaaagcgggttcagccgccctggtctccaccagcagggacagatgttccacag
cttctgctctacaacagtctgaccagagcgaaggagccgtttgttcctcagaaagggaac
cgagtgacgtggtactgctgtggacccacagtctatgacgcctcacacatgggacacgcc
agatcctacatatcattcgatattctgcgaaggattctcagggactacttcaagtttgac
gtcttctactgcatcaacatcacagacatcgacgacaaaatcattaaacgggcccgacag
aactacctcctggaccaatacaaggagaagcagccgaaagctgttcagatacttcaggac
gtcctgagtgccagagaccccttccaggtccttttggctgagaccacagacccagacaag
aagcagatgctggagaggctggacgccgccgtcaccgccgccctgaagcccctgcaggca
gcgatggagagcggcaacgaggcggtgcagcctctggcccaggcactgctggagagttcc
aaagacctgctgtctgattggttggacaaacagtttggaagtcaagtcacggagaactcg
atcttctccattctccctaaatactgggagggagaataccacaaagacatggaagctctg
aacgttcttccccctgatgtcctcacccgggtcagcgagtacgtgccggagatcgtggag
tttgtgaagaaggtcgtctcaaacggttacgggtacgactcgaacggttccgtgtacttc
gacacctccaagtttgatgccagtcagcagcactcgtacgccaaactggtgccggaggcc
gtcggagaccagaaagctctgcaagagggagaaggtgacctgagcatctccgctgacagg
ctgagtgagaaaaagtcccaaaacgacttcgccttgtggaaagcctccaaaccaggagag
ccgtcctgggactctccctgggggaagggacgacctggctggcacatcgagtgttcagcc
atggctgggtctgtcctgggagagtccatggacatccacggtggagggtttgatctgcga
ttccctcatcacgacaacgagctggctcagtctgaggcttactttgataacgactgctgg
gtgcgatacttcctgcacaccggacacctgacgatcgcaggctgcaagatgtccaagtct
ctgaagaacttcatcaccattaaggacgcgttggccaagaacacagcgcgacagctccgc
ctggcgttcttgatgcattcctggaaagatacgctggactactcctccaacacgatggag
tcggccgtccagtacgagaagtttatgaatgagttcttcctcaatgtgaaagacttactg
cgcgctccgaccgacatcacaggtcgctttgagaagtgggaggcagcagagatggagctc
aacaacagtttctacgacaggaagtcggccgtgcacgaggctctgtgtgacaacatggac
actcgcacggccatggaggagatgagggtgctggtcaaccagagcaacagctacatcgcc
agcaggaagagcgccaagctgcggcccaaccgcctgctggtggagagcatcgcagtgtac
ctcaccaacatgctgaagatatttggcacaattgaaggatccgatcccgttggtttccct
gtgggggggcagggtcaaagtattgacctggagagcacggtgatgccgtatctctcggtg
ctgtcggatttcagagagcgcgtcagaaaaatcgccagagagcagaaagtgaccgagctg
ctgcagctctgcgacacagtgcgtgacgacacgttaccggagctcggcgtgcgactggag
gatcatgaaggtttgcctactgtggtgaaactggtggacaaggagacattactgaaggag
agggaggagaagaagaagatggaagacgagaagaagaggaagaaggaggaagctgccaga
aagaaacaggaacaagagatggcgaaactcgccaagatgaaaatccctccatgtgacatg
tttcgtaaagaaactgacaaatattccaagtttgatgaaacgggtttccccacgcatgac
gcagaagggaaggagctgagcaaaggtcaagctaagaagctgcgtaaactctacgaggcg
caggagaagttacacaacgagttcctgcagatgaaccaaaatggaaactga
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