Hippoglossus stenolepis (Pacific halibut): 118108008
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Entry
118108008 CDS
T08308
Name
(RefSeq) LOW QUALITY PROTEIN: SH3 and multiple ankyrin repeat domains protein 2
KO
K15009
SH3 and multiple ankyrin repeat domains protein
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_4
SAM_1
SAM_2
Ank_5
SH3_2
PDZ
PDZ_6
SH3_9
FERM_f0
SH3_1
Motif
Other DBs
NCBI-GeneID:
118108008
NCBI-ProteinID:
XP_047196040
LinkDB
All DBs
Position
1:complement(1174495..1270563)
Genome browser
AA seq
1868 aa
AA seq
DB search
MAQSFSDYSDDCASDSSREETIYETIRATAEQSAHHMDDIHTNTQVVRVLIPDLQQTKCM
RFNPDATVWVAKQRILCTLNQSLKDVLNYGLFQPASNGRDGKFLDEERILREYPQPISKG
VPALEFRYKSRVYREPNVDEKQIAKLHTKANLRRFMDLIQHNQEDKVSKMLERGFDPNYH
DSDTGESPLTFAAHLDGVVELIKVLKNGGAHLDFRAKDGMTSLHKAARSKNQVTLMTLLE
LGASPDYKDSRGLTPLYHSVVGGGDPGCCELLLSHQASVCCQDENGWHEVHQACRHGHVQ
HLEHLLFYGADMSAQNASGNTALHISALYNQDNCARVLLVRGADKEVKNYNSQSPFQVAI
IAGNFELAELIKNHKETDIVPFREAPAHXKRRRVQLPAGSGGNSQSPRRCRSGGVLLRSN
SDNNLNVSQYQQQQQQQQQQLGSPGSWAPHLQQHHPHRAPQQGHSQPGSSALHRSLSPQL
LQQMPSGSPNGTVVVRTMGRGARSRSPSLSRLGEEARRAMASQRQPSLSSHGEGVGTRRK
LYSAVPGRHFVAVRPHTAQAEGEINLYKGDRVKVLSIGEGGFWEGSARGQVGWFPADCVE
EIPAKATEERSSDRADRRKLFRHYTVGSYDSFDASSDCVVDEKTVVLQKKENEGFGFVLR
GAKADTPIEEFTPTAAFPALQYLESVDEGGVAWQAGLRTGDFLIEVNQENVVKVGHRQVV
NMIRQGGNRLLIKVVTVSRNLDPDDTARKKAPPPPKRAPTTALSMRSKSMTSELEELVDK
ATLRKKKGDKVEEMTHAQKTSPVDMKIATIKPRPSSRCLVTPTDMNSMYHDRQGVAVVPP
TVPGAFLGLPEKGTIKKQKSIGTDEDDKQGFLTPPPLKFSRSLSMPDTSEDIPPPPGISP
PSPPGYNSAAGPTSKGYATTRPSFTQNSPNAVTTISRAGIGTLRRGYYRQSSEQFESTRL
RGRAPVPENPYSEVGNKTLYVPAKPARRKGMLVKQSNVEDSPEKMCRMPASPSGPVSMPT
TPVERTCSSIPIPTIIVKEPSTSSSGKSSQGSSMEIEPTTPEHPPLTPTVGSGGLRPEDP
HSLSNPFAAAIAGAVRDRERRLEARKNSIAFQSIDIGDDDLSGPTPTPRLRQSKSIDEGM
FSSDERLRRILAPPLARLGPPVGGGSGNMTDFNTPEPTVVREPLNTRTGQCPNLDSPVSL
PATPPKSHYRANGTYLHPVTGKPLDPNSPLALALAARDRAMKEQQNHPQSQPPNPPQVQT
PKHEAQSLPVQPSHKPDLNQPLFIDTKLRSGIETSFAAISTATMGRPGRGGLRRQMTEQK
YESDGAREERQHQAVEERKSAPADVADSSQPKSTGLLMVHTSTEAGNKVNNQDVEGQDSN
RPSELKDPNQPDPHNPPTLSNPQPPSSRRRSVPLGESLDEPVKLPFRIPPPPLASVDIDE
DFEFTEPLPPPLEFANSIDIPDDQASAIAEMLQQQRRNGGPRLPPYDPHAPPPVIDQHKR
VANSMPPSYPPPPPDQESGVGDSGIEEVDSRSSGDPQHMETTSTVSSISTLSSEGGFCDS
ALESLYATADGHAFLVDRPPVPPKPKGKSVINRTSLYHDALIEEPPESYGSPPQAPPPPP
SSSEPPRTPTQRTSKLWGDQPPELCSPPSTPDTKNTVITELSSILQQMNRDRPPKPGESL
DSPTGTRGAFGTRPPTEDSGMRNNAAAAAPLTSTPPSSLPSQTHPCSPPDSVSSLTPCSS
LPPSVSPTLTDVFGLPTPPMGSGGGYSLSSSYGGSGSSRSPSPLTLMQAVAASGKPFASK
PMELWSKHDVADWLESLNLGEHRDAFLDNEIEGAHLPSLQKEDLIDLGVTRVGHRMNIER
ALKLLQDR
NT seq
5607 nt
NT seq
+upstream
nt +downstream
nt
atggcccagagcttttcagactactccgacgactgcgcctccgacagctccagagaagag
accatctacgagaccataagggccacggccgagcagtcggcgcaccacatggacgacatt
cacacaaacacgcaggtcgtccgcgtcctcatccccgacctgcagcagacgaaatgcatg
aggttcaacccggacgcgaccgtctgggtcgccaagcagcggatcctgtgcacgctcaac
cagagcctgaaggatgtgctcaactacgggcttttccagccagcgagcaacgggagggac
ggcaagttcctggacgaggagcgaatcctgcgagagtatcctcagccaatcagcaagggc
gtcccggctttggagttccgctacaagagccgagtttaccgggagccaaacgtggacgag
aaacaaatcgccaaacttcacaccaaggccaatctgaggaggttcatggacctcatccaa
cacaaccaggaggacaaagtgtcgaagatgttggagagaggcttcgatcccaactaccac
gacagtgacactggtgagagtccgctgaccttcgccgctcacctggacggcgtcgtggag
ctgatcaaggtgctgaagaacggaggagctcacctggacttcagggccaaagacggcatg
acctccctccacaaagctgctcggtccaagaaccaggtcacgctcatgacgctgctggag
ctcggagcgtctccggactacaaggacagccgtggtctgactcctctgtaccacagcgtg
gtgggggggggggacccgggctgctgcgagctcctgctgagccaccaggcctccgtctgc
tgccaggacgagaacggctggcacgaggttcaccaggcttgtcgtcatggccacgtgcag
catctggagcatctgttgttttatggagcagacatgagcgcccagaacgcctccggaaac
acagctctacacatcagtgccctgtacaaccaggataactgtgccagagtgctgctggtt
cgtggagccgacaaagaagtgaagaactacaacagccagagtccatttcaggtcgccatt
atagccgggaactttgagcttgctgagctcatcaagaaccacaaagagacagatatagtg
cctttccgtgaggccccagcccacnccaaacgccgccgggtccagcttccggcaggcagc
ggaggaaacagccagtctcctcgccgttgtcggtctggcggggtcctgctgcgctccaac
agcgacaacaacctgaacgtcagtcagtaccagcagcagcagcagcagcagcagcagcag
ctcggttcccccggcagctgggcccctcacctgcagcagcaccacccgcacagggccccc
cagcagggtcactcgcagcctggctcgtcagcgttacaccgcagcctgtcccctcagctg
ctccagcagatgcccagcggcagccccaatggcaccgtggtggtccggaccatggggagg
ggggcgcggagccgctcgccctccctcagccggctgggggaggaggctcgaagggctatg
gcctcccagcgccagccaagtctcagcagtcatggcgagggcgtcggcaccaggaggaag
ctgtacagcgcggtgcccgggagacattttgtggcggtgcgtccccacaccgctcaggct
gagggggagatcaacctgtacaagggcgacagggtcaaagttctgagcatcggagagggg
ggattctgggagggcagcgcccgtggccaggtgggctggtttccagccgactgcgtggag
gagatcccggccaaggccaccgaggagaggagctcggatcgagccgacagacggaagctg
ttcagacactacactgtggggtcctacgacagcttcgatgcttccagtgactgcgtggtg
gacgagaagacggtggtgctccagaagaaggagaacgagggatttggcttcgtcctgcgg
ggagccaaagcggacacgcccatcgaggagtttactcccacggccgccttccccgcgctg
cagtacctggagtcggtggacgaggggggagtggcatggcaggcgggactccgaacgggc
gacttcctcatcgaggtgaaccaggagaatgtggtgaaggtcggccacaggcaggtggtc
aacatgatccgtcagggaggaaaccggctcctgatcaaggtcgtgacggtgagccggaat
ctggaccccgatgacacggcacgcaaaaaagctcctccgcccccaaagagagcccccacc
acggccctgtccatgcgctccaagtcgatgacgtcggagctggaggaactcgtggataaa
gccactctaaggaaaaagaaaggtgacaaagtcgaagagatgacgcacgcccagaagact
tcgcctgttgatatgaagatcgccacaatcaaaccacgcccctccagtcgctgcctggtt
acgcctactgatatgaattccatgtatcatgaccgccagggagtagcagtggtgcccccc
actgttcctggagccttcctggggttacctgagaagggcaccatcaagaagcaaaagtca
ataggtacagacgaggatgacaaacaaggattcctcacacctccgccactaaagttctcc
cgcagcctctctatgcctgacacctcagaggacatccctcctcctccaggcatttcaccc
ccttcgccacctggctacaactcagctgccggccctacatccaaaggctacgccaccaca
cgacccagcttcacccagaactcacccaatgcagtgaccaccattagcagagccggcatt
ggtacgttgaggcgtggctattaccgccagagctcagagcagtttgagagcacacgttta
cgagggcgtgcaccagtgccagagaacccttactccgaggtgggcaataagacactgtat
gtgccagcaaaaccagctcgaaggaagggcatgctcgtaaaacagtccaatgttgaggac
agtcctgagaaaatgtgtcgcatgccagcaagtccctcaggcccggtctccatgcctact
acacctgtagaacgaacatgctcatccatccccatccccacaatcatcgtcaaggagccc
tccaccagcagcagtggcaagagcagccagggtagcagtatggagattgagcccaccact
cctgaacacccccctctcacacccactgttgggagtggaggtctgcgtcctgaagatcca
cattctctaagcaaccccttcgctgcagctattgctggggcagtgcgggaccgggagagg
aggctcgaggcaagaaagaactcaattgccttccagtcaatagacattggggatgatgat
ttgagtggtccaacacctacccctcgcctacgccagtcaaagtccatcgatgaaggcatg
tttagtagcgacgagcgacttagaaggatattggcccctcccttagcacggcttgggccc
cctgtagggggtggcagtggcaacatgacagattttaatactcctgagcccacagttgtg
cgggagcctctgaacaccagaactggccagtgtcccaacttagacagtcctgttagtctc
ccagccactcctcctaagagccactacagggccaatggaacctacctccaccctgtcacc
ggcaagcccttggaccctaattctccactcgctctggccctggcagctcgtgaccgggcc
atgaaggagcaacaaaaccatccacagagtcagcctccaaaccctcctcaggttcaaacc
cccaagcacgaagcccagtcccttccagtccagccaagccacaaaccagacctcaaccaa
cccctctttattgacaccaaactacgttctggcatagagactagttttgctgcaatctcc
acagcaaccatggggcgtcctggccgaggtggcctgcggagacagatgacagagcaaaag
tatgagtctgatggggcacgggaagagaggcagcatcaggccgtcgaggagaggaaaagt
gcaccagctgatgtggcggactcgtcacagcccaagtcaacggggctcttgatggtccac
accagcacagaagcaggcaacaaggttaacaaccaagatgtggaggggcaggacagcaac
aggccatcagagctgaaggaccctaaccaaccggatccacacaaccctccgacactctcc
aatccccagccaccctcatcacggaggaggagcgttcctttaggcgaatccttggatgaa
ccagtaaagctgccatttcgaatcccccctccccccctggcctcagttgatattgatgaa
gactttgagttcacagagcccctccccccaccactggagtttgccaacagtattgacata
cctgatgaccaggctagtgccattgcagagatgcttcagcaacagagacgaaatggggga
cctcgattacccccctatgatcctcacgccccaccacctgtcattgatcaacacaaacgg
gtggcgaacagcatgcccccctcatatcctcctcctccaccggaccaagagtcaggggtg
ggtgactcgggcatcgaagaggtagacagccgcagtagcggggatcctcagcacatggag
accaccagcaccgtttccagcatctccaccctgtcgtcagagggaggcttctgcgacagc
gctctggagagcctctatgccactgcagacggacatgccttcctggtggatcggccccca
gtgccgcccaaacccaagggcaagtctgtcatcaacaggacatcactttatcatgacgcg
ctcattgaagagcccccagagtcctatgggtctccaccacaggcccctccccctccccct
tcatcctctgaacctcctaggactcctactcaaaggacatccaagctgtggggcgaccag
cccccagagctgtgcagccccccatccacaccagacaccaagaacaccgtcatcaccgag
ctgagctccattctgcagcaaatgaatcgcgacaggccgcccaagccaggagaaagcctc
gactcccccactgggaccaggggggcctttggaacaaggcctcccacagaagactcagga
atgcgtaataacgccgctgctgccgcccccctcacctccaccccacccagcagcctccca
tcccagacgcacccctgcagccccccagactccgtctcctccctcaccccctgctcatca
ctgcctccatcagtgtcgcccaccctcaccgacgtcttcggcctgcccaccccgcccatg
ggcagcggcggcggctacagcctgagctcctcctacggcggcagcggcagctcgcgctcc
ccctcgccgctcacgctgatgcaggcggtggcggcctcggggaagcccttcgcctccaaa
cccatggagctgtggagcaagcacgacgtggccgactggctggagagcctcaacctgggg
gagcacagggacgctttcctggacaatgagatcgagggggcccacctgccctcgctgcaa
aaagaggacctgatagacctgggtgtgacgagggtgggccaccgtatgaacatcgagagg
gccctcaagctgctgcaggacagataa
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