Hippoglossus stenolepis (Pacific halibut): 118108381
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Entry
118108381 CDS
T08308
Symbol
efl1
Name
(RefSeq) elongation factor-like GTPase 1
KO
K14536
ribosome assembly protein 1 [EC:3.6.5.-]
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
118108381 (efl1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
hsp03009
]
118108381 (efl1)
Ribosome biogenesis [BR:
hsp03009
]
Eukaryotic type
Pre-60S particles
GTPases
118108381 (efl1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
EFL1
EFG_C
EFG_III
GTP_EFTU_D2
EF-G_D2
EFG_IV
MMR_HSR1
FKBP_C
RsgA_GTPase
Motif
Other DBs
NCBI-GeneID:
118108381
NCBI-ProteinID:
XP_035011616
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All DBs
Position
1:complement(30832621..30908231)
Genome browser
AA seq
1125 aa
AA seq
DB search
MGHTSLQKIIALQRNPANIRNLCILAHVDHGKTTLADCLVASNGIISSRLAGKLRYLDSR
EDEQIRGITMKSSAISLHCTHGDQEYLLNLIDSPGHVDFSSEVSTAVRLCDGAIVVVDAV
EGVCPQTQVVLRQAWLENIRPVLVINKIDRLILELKLSAQEAYTHLQKILEQVNAVTGSL
FTSKVLEERAEKEEEKERDIASGDYVYDCSAGLEEADDSLLYFSPDQGNVVFASAMDGWG
FSIQQFAHIYSQKMGIKAAVLQKTLWGDFYLNAKAKKIMKGAQAKGKKPLFVQLVLDNIW
SLYDAVVTRRDAEKVEKVVTSLGVKVMARDSRHSDPKVLLAAICSQWLPVSQAVLSMVCE
KLPSPLDIAAERVEKLMSVGARRFDSLPKQTQELKRAFLQCSSGENSPVIVFVSKMFAVD
TKALPQNRQRPLTQEELSQRRELARQRHADRMAADQAATESNKELIHTGRVPQEGISTAK
MESLTLKDSKPEEEEEQKETFVAFARVYSGTVKKGQRIFVLGPKYDPAHGLRMLPEGCSA
SDDVCEVPHLSCCTMESIYLLMGRELEELEEVPAGNILGVGGLQEWVLKSATLSTSPACP
PFTPLNFEATPIVRVAIEPKHPSEMPKLVRGMRLLNQADPCAEVLIQETGEHVLVTAGEV
HLQRCLDDLRERFAKIEIIASKPIIPFRETVVRPPKLDMVNEELGKQHKVAIIHQVKEEA
SQGHSSDNLHVDPSGLVTLDTPNRLSTVSVRAIPLPHEVTCLLESSSELIRTLEQVNMSL
REGKSLDVSLRTLEAIAGLKTQLESLLQGRKWRNTVKHIWAFGPRRYGPNILLNSVEGYQ
RPSVWQCLSRGDKVIEAGAQAAFLRDFDNSIISGFQLATLSGPMCEEPLMGVCFSVERWD
IQSSAQSQNHDSVEKGSISPEDLAHHKVERRSETSQAEGTAAGPGHARRRPEANAADCYG
PVSGQLIAAMKEACRHAFQAQPQRLMAAMYTCEIMATAEVLGRMYGVLGKREGRVLHEEM
KEGTDMFIIKAVLPVAESFGFADEIRKRTSGLASPQLVFSHWEVTGSDPYWVPTTEEEYL
HFGEKADSANQTLKYMNAVRRRKGLYVEEKIVEHAEKQRTLGKNK
NT seq
3378 nt
NT seq
+upstream
nt +downstream
nt
atgggccacaccagcctgcagaagatcatcgcactgcagagaaaccctgcaaacatcagg
aacctgtgcatcctggctcatgtagaccatggcaaaactactcttgccgactgcttagtg
gcaagtaatggcatcatatccagtcgactggctgggaagctgaggtatctggacagcaga
gaggatgaacagatcagaggaatcacaatgaagtccagtgccatctctctgcactgcaca
catggagatcaggagtacttactaaatctgatcgactctccgggtcacgtcgacttctcc
tcggaggtatccactgctgtcaggttgtgtgacggtgccatcgtagttgttgatgctgtc
gagggtgtgtgtccacagacccaagttgtgttgcgtcaagcatggctggagaacatccgg
cctgttctagtcatcaataaaatcgatagactcatcctggagctgaaactcagtgctcag
gaagcctacacccacttgcagaagattctggaacaggtgaatgcagtgacaggttctttg
ttcacgtccaaagtgctagaggagcgagcagagaaagaggaggagaaagagagggatata
gccagtggtgattatgtttacgactgcagcgctgggctggaggaggcagatgactccctc
ctctacttctctcctgaccaagggaatgtggtgtttgccagcgccatggatggatggggt
ttcagcatccagcagtttgcccacatctacagccagaaaatgggcattaaagcagcagtg
ctgcaaaaaaccctgtggggagatttctacctcaatgcaaaagcaaaaaagatcatgaaa
ggagctcaggccaaaggaaagaagccactgtttgtgcagctcgtgctggataacatttgg
agtttatatgatgcagttgtcactcggagggacgcggagaaggtggagaaggttgtgaca
tcacttggggtaaaggtgatggccagggattctcgtcactctgaccccaaagtcctcttg
gctgccatctgcagccagtggttaccggtatcccaagctgtcctttcaatggtgtgtgag
aagcttcccagtcccttagacatcgcagcagagcgcgtggagaaactgatgagtgttgga
gcacgacggtttgactcattgcccaaacaaactcaggaattaaaaagagcattcctacag
tgttccagtggagaaaattctccagttatcgtctttgtgtccaagatgtttgctgtggac
accaaggccttgcctcagaacagacagagaccgttaacccaggaggaattatcccagcgc
agggagcttgctagacagagacacgctgacaggatggcagctgatcaggcagcaacagag
agcaacaaagagctcatccacacagggcgtgtgccacaggaaggcatcagcacagctaaa
atggagagtctgacattgaaagactcaaagccagaggaggaagaggagcagaaggagacc
tttgtcgcctttgcccgggtctacagcgggacggtcaagaaagggcagagaatatttgtg
ctaggaccaaagtatgaccctgcccacggcctgcgcatgcttccagagggttgcagtgct
tcagacgatgtgtgcgaggtgcctcatttgtcctgttgtactatggaaagcatctatctg
ctgatgggccgagagctagaagagctggaggaggtgcctgcaggaaacatcctgggtgtt
ggaggtctgcaggagtgggtcttgaagtcagccaccctatcaacctcccctgcctgcccc
cccttcaccccactcaactttgaggccacgcccatcgtacgggtagcaatagagcccaaa
catccaagtgagatgccaaagctagtgcgtggaatgcgtttgttgaaccaggcagatccc
tgtgctgaggtactgatccaggaaacaggagaacatgttctggtcactgctggtgaggtt
catctccaacgctgcctggatgacctccgagaacggtttgctaaaattgaaatcatcgca
tccaagcccatcattccattcagggagactgtggtacgtcctcctaaattggatatggtg
aatgaagaactgggaaagcagcacaaagtagccatcattcaccaggtaaaagaagaggcc
tcacagggccattcatcagacaacctccacgtggaccccagtggtctggtgaccctcgat
actcccaacagactgtccactgtcagcgtccgggcaatccccctgccacacgaggtgacc
tgtctgttggagagtagctctgagctgatccggactctggagcaggtcaacatgtccctg
agagaggggaagagtctggatgtcagcctcaggaccctggaagccatcgctggactcaag
acccagctggaaagcctgctgcaggggaggaagtggaggaacaccgtgaagcacatctgg
gcttttggtcctcgcaggtacggccccaacatcctactgaacagtgtggagggctatcag
cggccctcagtgtggcagtgtctgagcaggggagacaaagttatcgaggctggagctcag
gccgcttttctgcgagacttcgacaacagcatcatcagcggcttccaactagcaactctg
tcagggcccatgtgtgaggagcccctaatgggagtttgcttctctgttgagaggtgggac
atccagtcttcagcccaatctcagaatcatgactctgtggagaagggctccatatctcct
gaggatttggcgcaccacaaagtggaaagaagaagtgagacttcacaagcggagggcaca
gcagcagggccgggccatgccagacgcagaccagaggctaacgctgcagactgctacggg
ccggtctccggccagcttatcgctgccatgaaggaggcctgccgtcatgccttccaggct
cagcctcagagactcatggccgccatgtatacctgtgagatcatggccaccgctgaggtg
ttgggccgaatgtatggtgtactggggaaacgtgagggtcgcgtcctccatgaagagatg
aaggaaggcacagatatgttcatcattaaagccgttctgcctgtggctgaaagctttgga
tttgctgacgagatccgcaagaggaccagcggcttggccagtccacagttggtcttcagc
cactgggaggttactggcagtgacccatactgggttcccaccactgaagaagagtacctg
cactttggtgagaaagcagactctgccaaccagacgctcaaatacatgaacgctgtccgc
cgccgtaaaggtctctacgtggaggagaagatagtggagcatgcagagaagcaaagaaca
ctcggcaagaacaagtag
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