Hippoglossus stenolepis (Pacific halibut): 118109098
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Entry
118109098 CDS
T08308
Name
(RefSeq) B-cadherin-like
KO
K05689
cadherin 1, type 1, E-cadherin
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp04371
Apelin signaling pathway
hsp04514
Cell adhesion molecules
hsp04520
Adherens junction
hsp05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04371 Apelin signaling pathway
118109098
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
118109098
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
118109098
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
118109098
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
hsp03036
]
118109098
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
hsp04515
]
118109098
04090 CD molecules [BR:
hsp04090
]
118109098
Chromosome and associated proteins [BR:
hsp03036
]
Eukaryotic type
Centrosome formation proteins
Other centrosome associated proteins
118109098
Cell adhesion molecules [BR:
hsp04515
]
Cadherins
Major cadherins
118109098
CD molecules [BR:
hsp04090
]
Proteins
118109098
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
RibLong
Stevor
BACON_2
Motif
Other DBs
NCBI-GeneID:
118109098
NCBI-ProteinID:
XP_035011816
LinkDB
All DBs
Position
5:17275129..17281355
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AA seq
805 aa
AA seq
DB search
MNSRSLVVILVLCHVQYLAVLAAAGIQQRCLNNRDNCSNNENLEQLPTFEFPHVAGSLKR
MKREWVIPAINFPENDRGPFPKFMVKIKSSNDGKVAITYKITGPGADQRPEGVFTVDRRS
GVLYVTQPLDREKTDKYILWAHAMQEKIIAEEPMELIINVIDQNDNAPQFTQNHFYGTVS
ESAEVDDSVLKVMAEDKDDPQMSNAIIRYQIKNQTPQIPRGDMFTINPWSGLISVAAGGL
DRETQPQYKLTIEAADMEGEGLAATCTAIISVSDSNDNVPQFIITSISTSVPENAAGLEV
IRLKVTDQDEPGSPNANTKYSIIAGNECGHFNVTTGANKMEGIIKTAKELDFESTPEFTL
LVVVTNEVPPSGPTWTSTATVTVAVEDKNEPPVFSPAEILVSISEHAKAGSSVAGVRAED
PDTARRQSVRYKIHNDTAHWLSIDQDTGSVKVRGSMDRESHYVKDGKYTVLILGYDNDTV
PATGTGAVVVTLLDVNDHRPVIRQRTATLCNKDPAPALLDIVDFDGPGHAGPFIVELQGE
HKINWTISTNSTSSVAALAPKRELSPGDYHVLMRIYDVGMLYQDSTLAVEVCQCEGATST
CFISHSAPRLHISSHATSVLGVIFGLLLLLLLLLLLLVLLRRRRRSSEKDFCHLEDMPRD
NIFLYDEEGGGEEDQDFDLSQLQKGPDNCHKVTDVFPTVQSRPCYRLLPQANEEICTFIE
NNLQAADSDPTAPPFDSLLVFDYEGVSSEASSLSSLNSSDSDEEQDFQSLSQWGPIFNRL
ADLYTRGTEEDDEDTETLPGKTEWV
NT seq
2418 nt
NT seq
+upstream
nt +downstream
nt
atgaacagcaggagtttggtggtgattttggtgctgtgccacgtccagtatttagctgtt
ctggctgcggcagggatccaacaacgctgcttgaacaacagagacaactgctccaataat
gaaaaccttgagcaactccccacctttgagtttccccatgtggccggcagtttgaaacgg
atgaagagggagtgggtcattcctgcgattaacttccccgagaacgacaggggtccattt
cccaaattcatggtgaagattaaatcaagcaatgacgggaaggtggcgataacgtacaag
atcactggaccgggggcggatcagcgtcctgagggtgtttttactgttgatcggcgatct
ggggttctgtacgtgacccagccattagacagggagaagacggacaaatacattctgtgg
gcccacgcaatgcaggagaagatcatagccgaggagccgatggagcttatcatcaacgtc
atcgaccagaatgacaacgctccacagttcactcagaaccatttctacggcacagtgagc
gaaagcgctgaagtcgacgactccgtgttaaaggtgatggcggaggataaagacgaccca
cagatgagcaatgcaataattaggtatcagataaagaatcagacgcctcaaatacccaga
ggggacatgtttaccataaacccctggagcggattgatcagtgtggcagcaggaggcctg
gacagagagacccagccacagtacaagctgaccattgaggctgctgacatggagggcgag
gggctggcagccacctgcaccgctatcatcagcgtctccgacagcaacgataacgttcca
cagttcatcatcacatctatttccacatccgtccctgaaaatgcagccggattggaggtc
ataaggttaaaggtcacagaccaggacgagccgggatctcccaacgccaacactaaatat
tcaataatcgcaggcaacgagtgcggacacttcaacgtcaccacaggcgccaataaaatg
gagggaatcatcaaaacagccaaggagctggattttgagagcactcctgaatttactctg
ctggtggtggtgactaacgaggtgccgccatccgggccgacgtggacctcgacggccacc
gtcaccgtggcggtggaggacaagaacgagcctcctgttttcagtccagccgagatcctc
gtgagcatctcagagcacgcgaaggcagggagctctgtggccggcgtcagagctgaggac
ccagatacagccaggagacagagcgtgagatataaaatacacaatgacactgcccattgg
ctgagtatcgatcaagacaccggctcggtcaaagtaagaggcagcatggacagagagtca
cattatgtcaaagacggcaaatacacagtcctgattttgggctatgacaacgacactgtc
ccagccaccgggacaggagccgtggtcgtgactttactggacgtgaacgaccatcgtcct
gtgatcagacagagaacagccactctgtgcaacaaggaccctgcccctgcattgttggac
atcgtggacttcgacggaccgggtcacgctggacccttcattgtggagcttcaaggagag
cacaagatcaactggaccattagcaccaactccaccagtagcgtggcagctctggccccc
aagcgggagttgtcgcctggtgactaccatgttctcatgcgtatctatgatgtcggcatg
ctctaccaagacagcacactggctgtggaggtgtgccagtgtgaaggagccacttccacc
tgcttcatctcacattctgcccctcgtctgcacatttcttctcacgcaacctcagttctt
ggagtgatttttggtcttttgttgctgcttctgctgttgctgctgctgctggtgttgttg
aggaggaggaggaggagctcggagaaggacttctgtcaccttgaagatatgcccagggac
aacatcttcctctatgatgaagagggaggaggtgaagaagaccaggactttgacctgagc
cagcttcagaaggggcccgataactgtcacaaggtcactgacgtcttcccgaccgtccag
agccgaccctgctaccgtctcctgccccaagccaatgaggagatatgtacatttattgaa
aacaacttgcaggctgcagacagtgaccccacagctcctcctttcgactctctcctggtg
tttgactacgaaggagtcagctctgaggcgagttcgctcagttccctcaactcctcagac
tcggacgaggagcaggactttcagagcctgagtcagtggggaccaattttcaacaggttg
gctgacctgtacactcgtgggacagaggaggacgacgaagacacagaaacactgccggga
aaaacagaatgggtctga
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