Hippoglossus stenolepis (Pacific halibut): 118109135
Help
Entry
118109135 CDS
T08308
Symbol
cnot2
Name
(RefSeq) CCR4-NOT transcription complex subunit 2 isoform X1
KO
K12605
CCR4-NOT transcription complex subunit 2
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
118109135 (cnot2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hsp03019
]
118109135 (cnot2)
Messenger RNA biogenesis [BR:
hsp03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
118109135 (cnot2)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
118109135 (cnot2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NOT2_3_5_C
Motif
Other DBs
NCBI-GeneID:
118109135
NCBI-ProteinID:
XP_035011876
LinkDB
All DBs
Position
5:21865864..21873102
Genome browser
AA seq
543 aa
AA seq
DB search
MFGARKKFVEFVEVVDNDFSDESMYYNQPSMFPHRSDKDMLSSPSPSSSGQLSQLGASLY
GPQSEFVSNTDNHHSFPMSQTWSGALGFSVRGMGNSTPQLNRNLTQGTQLPSHITPTTGV
STMSLHTPPSPSRGTLPMNTRNMLNHSQVSQSIGMSGRTNSMGSSGLGSPNRSSPSIICM
PKQQPARQPFTINSMSGFGMNRNQGFGMNNSLSSNIFNGTDGSENLTGLDLSDFPALADR
SRREGTGNPTPVLNPLAGRAPYVGMVTKPSTEQTQDFSIHNEDFPALPGPNYKDPTLNND
DSKTNLNSTSKSTSNADGPKFPGDKTTSAQNNNQKKGIQVLPDGRVTNIPSGMVTDQFGM
IGLLTFIRAAETDPGMVHLALGSDLTTLGLNLNSPENLYPKFASPWASAPCRPQDIDFHV
PSEYLTNIHIRDKLAAIKLARYGEDLLFYLYYMNGGDLLQLLAAVELFNRDWRYHKEERV
WITRAPGMEPTLKTNNYERGTYYFFDCLNWRKVAKEFHLEYEKLEERPHVPTTFNYNPAQ
QAF
NT seq
1632 nt
NT seq
+upstream
nt +downstream
nt
atgtttggtgctagaaagaaatttgtagagttcgtcgaggtggtcgataacgacttctct
gatgaaagcatgtactacaatcagccgtcgatgttcccacatcgatcggacaaagatatg
ctctcctccccctcaccatcgtcgtcgggtcagctgtcgcagctcggtgcaagtctgtat
ggtccacaaagtgagtttgtttcaaatacagacaatcaccacagttttcccatgtcacaa
acctggagtggtgcactgggcttttcagtcaggggcatggggaacagcacacctcagtta
aaccgaaatctcacacaaggcacgcagctaccaagtcatatcactcccacaacaggagtc
tccaccatgtccctccacacccctccgtcaccaagcagggggacgttgccaatgaacacg
aggaacatgctgaaccactctcaggtcagtcaaagcattgggatgagcggcaggaccaat
agcatgggcagctcggggctgggcagccccaaccgcagctcacccagcatcatctgtatg
cccaaacagcagccagcacgtcagcccttcaccataaacagcatgtcaggattcggtatg
aaccgcaaccagggttttgggatgaacaactcgttatcaagcaacatcttcaatggcaca
gatgggagtgaaaatctaacaggactggatctgtcagacttccctgcgttagcagacagg
agtcgaagagaagggactggaaacccaacaccggtgctcaaccctctggctgggagggct
ccctatgttggcatggtgacaaagccatcgacagaacagacacaggatttctccatccac
aacgaggacttccctgcactgcctggcccgaactacaaggaccccacgttgaacaatgac
gacagcaaaactaacttgaactccacaagcaagagcacatccaatgcagatgggcccaag
ttccccggagacaagacgacctcagcacagaacaacaaccagaagaaaggaatccaggtg
ttgcccgatggtcgggtgacgaacattccctcaggaatggtgacagaccaattcggcatg
atcggcctgttgacgtttatccgggcggcagagactgatcctgggatggtccatctggcg
ctggggagcgacctcacgacactgggactcaacttaaactcaccagaaaacttatacccc
aagttcgcctctccgtgggcctcagcaccttgtcgacctcaagacatcgacttccatgtt
ccctctgagtatttaaccaatatccacataagggacaagttggctgcgatcaaactggct
cgatatggcgaagacctgttgttctacctgtactacatgaacggtggagacctgctacag
cttttggcagcagtagagctcttcaaccgggactggaggtaccacaaagaagagcgggtt
tggataacgagggcgcccggcatggagcctacactgaagaccaacaactatgagaggggc
acctactacttttttgattgtcttaactggagaaaagtagccaaggagtttcatctggag
tacgagaagctggaagagaggcctcacgtgccaacaacgttcaactacaacccagcccag
caggccttctaa
DBGET
integrated database retrieval system
