Hippoglossus stenolepis (Pacific halibut): 118109137
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Entry
118109137 CDS
T08308
Name
(RefSeq) potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 3
KO
K04957
hyperpolarization activated cyclic nucleotide-gated potassium channel 4
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
hsp04040
]
118109137
Ion channels [BR:
hsp04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (HCN)
118109137
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GFIT
Motif
Pfam:
Ion_trans
Ion_trans_N
cNMP_binding
Ion_trans_2
IFT20
Motif
Other DBs
NCBI-GeneID:
118109137
NCBI-ProteinID:
XP_035011880
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Position
5:complement(12834041..12851001)
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AA seq
1179 aa
AA seq
DB search
MERFQSSMRKRLYSLPQNIGQKAFVIDEGDSGDKDTKRKSIRLKHLSPPSPASSCRSFEE
ARSEDLERDVIVKTNLNGDCRRFRGSISSITGRHPLGSDPAEQRRLIPEADAWVGESFPD
ESGPGAQQRAAGGPSGAAGQGSVFDQSTFIKLEDAEQILPEDDRLYQAGFMHRQFGAMLQ
PGVNKFSLRMLGSERAVEHERERVKSAGFWIIHPYSDFRFYWDLTMLLLMVGNLIIIPVG
ITFFKDEHTPPWIVFNVVSDTFFLMDLVLNFRTGIVKEDNTEIILDPQKIKIKYLKSWFV
VDFISSIPVDYIFLIVETRIDSDFYKTARALRIVRFTKILSLLRLLRLSRLIRYIHQWEE
VFHMTYDLASAMVRIMNLIGMMLLLCHWDGCLQFLVPMLQDFPHDCWVTRNKMVNDTWGQ
QYSYALFKAMSHMLCIGYGLYPPIGMADVWLTILSMIVGATCFAMFVGHATALIQSLDSS
RRQYQEKYKQVEQYMSFHKLPADMRQRIHDYYEHRYQGKMFDEESILEELNEPLRQEIIN
FNCRKLVASMPLFANADPNFVTSMLTKLRFEVFQPADYIIREGTIGKKMYFIQHGVVSVL
TKNSIDMKLSDGSYFGEICLLTRGRRTASVRADNYCRLYSLSVDNFDEVLEEYPMMRRAF
ETVAVDRLDRIGKRNSVLQHKVQHHQSSGTLNLQESEIIQRIVQHDRDMAQCTQLIQTSD
AQSLIPLPASPSPTPVIWASLVQAPLQAAATTTPLALALAQHSHLPPILFHHPLVPGSGS
VKDPSCHPRRVHVGANTSSICGSGHGSPTSSTLRTQHLSTGPVSPVLMSQPIFTSSLQPL
TPLPMHQLTPLPPPHPPHSGIASVFPISQATVSYTCSAQLHPQPFHGAMTTPHYPIGFFQ
QGAPGRLGGRFPAPSASYISPLISSSVDPILSHLQQTTHATLQQMRSSHDRAGRTPSGLN
LPTFPFITSTQSSSGFMQPVSAVGAGAAASLAQHSLAGLQSVFLPQVLPEHSALASLAQY
GSAEASPCYTPPVQSPRIQSPVRGRTVYQSELPSTMGSHCPLTPQTSYPARVACTLKERA
ESSVNLFTQEIKTISGSNSSIHQERPPSEGAAGASSPFSSPMAVSKPYSSIPGQATPVSR
THSASEHQNQSAGVHSPHVRSPAKILETEQKQSKLPSNL
NT seq
3540 nt
NT seq
+upstream
nt +downstream
nt
atggaaaggttccagtcgtccatgcgcaaacggctctacagcttgccgcaaaacattggg
caaaaagccttcgtgattgacgaaggagacagcggcgacaaggacaccaagaggaaaagt
atccggctaaaacatttgtcccctccgtctcctgccagcagctgcaggagctttgaggag
gccaggagcgaggacttggagagggacgtgattgtgaagaccaacttgaacggggactgt
cgccggttcaggggcagcatctcctccatcaccgggcgccatcctctggggtcagacccg
gcggagcagcggcgcctcatccccgaggcggacgcctgggtcggtgagagtttccccgat
gagagcggccccggggcccagcagcgggcagcgggtggtccgagtggcgcagccgggcaa
gggtccgtgttcgaccagtcaactttcatcaagttggaggacgccgagcaaatcctaccc
gaagatgaccggctgtaccaagccggcttcatgcaccggcagtttggggcgatgctccag
ccgggtgtcaacaagttctccctgcggatgttggggagtgagagggccgtggagcacgag
agggagcgagtaaagtctgcgggcttttggataatccacccgtacagtgattttaggttc
tactgggatctgaccatgctgctgctgatggtgggaaacctcatcatcatccccgtgggc
atcaccttcttcaaggacgagcacacgccgccctggatcgtcttcaacgtggtgtccgac
accttcttcctcatggacctggtcctcaacttccgcacgggcatcgtgaaggaggacaac
acggagatcatcctggacccacagaagatcaagatcaagtacctgaagagttggttcgtg
gtggacttcatctcctccataccggtggactatatcttcctcatcgtagaaacgcgcatc
gactctgacttctacaagacggcccgggccctgaggatcgtccgcttcaccaagatcctc
agtctgctgcggctgctgcgcctctccagactcattcgctacatccaccagtgggaagag
gttttccatatgacctacgatctggccagcgccatggtgcgtatcatgaacctgatcggt
atgatgctgctgctgtgtcactgggatggctgtctacagttcctggtgcccatgctgcag
gacttcccccatgactgctgggtcaccagaaacaagatggtgaatgacacgtgggggcag
caatactcctacgccctgttcaaggccatgagtcacatgttgtgcatcgggtacggcctc
tacccccccatcggcatggctgacgtgtggctcaccatcctcagtatgatcgtgggggct
acctgctttgctatgtttgtggggcatgcgactgctctcatccagtctctggactcctcc
aggaggcagtaccaagaaaagtataaacaggtggagcagtacatgtccttccacaagctc
ccggccgacatgcgtcagaggatccatgactactacgagcaccgttatcagggcaagatg
tttgatgaggagagcattctggaggagctgaacgagccactgcgacaggaaatcatcaac
tttaactgtcgtaaacttgtggcctccatgcctctgttcgccaacgccgatccaaacttt
gtcacctccatgctcaccaaactgcgcttcgaggtcttccagccggccgactacatcatc
agagagggaaccatcggcaagaagatgtacttcatccagcacggtgtcgtgagtgtcctg
accaagaacagcatcgacatgaagctgtctgatggctcttattttggagagatctgcctg
ctgacccgaggcaggaggacagccagtgtgcgagcagataactactgtcggctgtactcg
ctctcggtggacaacttcgacgaggtgctggaggagtatcccatgatgaggagagccttc
gagactgtggctgtcgaccgcctggaccgaatcggtaagaggaactctgttcttcagcat
aaagtccagcatcaccaaagctctggtacgctaaacctccaagagagtgagatcatccaa
agaatagtgcaacacgaccgtgacatggcccaatgcacacagctgattcagaccagcgat
gcacagagtctcatccctcttcctgcttccccgtcacccaccccagttatctgggcctcg
ctggttcaggccccgctccaggctgctgcgaccaccacccctctggctctggccttggcc
cagcactcgcatcttcctcccatcctcttccaccatcctctggtcccaggctctggttct
gtgaaggaccccagctgtcatccaaggagagtccatgttggagcgaacacctccagcatc
tgtgggtcagggcacggttctcccaccagctccaccctaaggacccagcatctgtccact
gggccagtgtcgcccgtactgatgtcccagcccatcttcaccagcagcctgcagcccctc
acccctttgcccatgcaccagctcacacccctgcccccgccccatcctccccactccggc
attgcctcggtcttccctatcagccaggccaccgtctcctacacctgctccgcccagctc
cacccccagcccttccacggtgctatgaccaccccacactaccctatagggtttttccag
cagggggcaccagggaggctaggagggagattcccagccccctccgcctcctacataagc
ccactgatctccagctcagtcgaccccattctaagccacctgcagcagaccactcacgcc
acactgcaacagatgaggtccagtcatgacagagcagggaggacgcccagtggtctgaac
ctcccaactttccccttcatcaccagcacccagtcctccagtggatttatgcagccagtg
tctgcagtcggagccggagccgctgcctctctggcccagcacagcctggcaggcctccag
tctgttttccttccccaggttcttcccgagcactcagcgctcgcctccctggcccagtac
ggctctgcagaggcgtctccctgctacacgcctccagtccaaagtcccagaatacaaagc
cctgtgagggggaggacagtttaccaaagtgagctccccagcaccatgggctctcactgc
cctcttacccctcagacctcataccctgccagggtggcttgtaccctcaaagagagggca
gagtcctctgtgaatctctttacccaggaaataaagactatctcaggctctaacagctct
atacaccaggaaaggcccccctcagagggagcggcgggggcgtcgagccccttctcctcc
cccatggccgtcagcaaaccctacagttccatccctggtcaggccactcctgtcagtcgg
actcattcagcgtctgaacatcagaaccagtctgctggcgttcactctccccacgttaga
tctcccgctaagatattagagaccgaacagaaacagtccaaacttccctccaacttgtga
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