Hippoglossus stenolepis (Pacific halibut): 118109174
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Entry
118109174 CDS
T08308
Symbol
sntb2
Name
(RefSeq) beta-2-syntrophin
KO
K24064
beta-syntrophin
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
118109174 (sntb2)
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GFIT
Motif
Pfam:
Syntrophin_4th
PH_17
PDZ
PH
PDZ_2
PDZ_6
PDZ_Tricorn
Motif
Other DBs
NCBI-GeneID:
118109174
NCBI-ProteinID:
XP_035011936
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Position
5:complement(27850831..27870331)
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AA seq
585 aa
AA seq
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MAVWTRADKNGQLDLLLRDRWIRVSAELTRETLTLTAEAEASGPGGTHWDNSSAGLRNGI
SNGNDPGTSPGNSGRGPDQLQSQNPGGRGRSSSPGRGGVSRGQHDGNYSPGKYPNNGTNS
DFGSPGSSYGSPGSSFGSRQGDFPVSLDGSSEAVRKVRVVKQESGGLGISIKGGRENRMP
ILISKIFPGLAADQSRALRVGDAILSVNGNDLREATHDLAVQALKKAGKEVTLEVKYIRE
VSPLFKKPSLVADLPWDGVRPQSPSYSGSEDSGSPKHSGSSSSKDRKVISLRMCFISRNL
TMPDLENRLLELHSPDGQHTVVLRCKDGPSASSWFTAIHTNIAALLPQTLAHINAYLGAS
SSTSTHPHLKHIGWLAEQVQLEGGRQQYRPLVMALTEKDILLFESVPWNRESWSMPLLTH
PLLATRLVHSGSARESPAQGADLVFATRTGTGRGIESHIFRVETHWDLSSWTRALVQGAH
AAAELIKEVSIGCTLNRQDVRLTLHYEKGFTVTREPVDPSGGAVLYRYPYEKLKMSADDG
IRNLYLDFGGPEGEMVFDLHSGPKPVVFVLHSFLSAKLTRMGLLT
NT seq
1758 nt
NT seq
+upstream
nt +downstream
nt
atggcggtctggacccgagcggacaaaaacggtcaactggacctcctgctccgggaccgc
tggatccgagtgtccgccgagctcacccgggagacgctgactctgacggccgaggcggag
gcgtccggaccgggggggacccactgggacaactcctccgcgggcctgcggaatggcatc
tccaacggaaacgacccggggacgagtccggggaactccggccgcggtccggaccaactc
cagagccagaaccccgggggtcggggccgcagctccagccccgggcgagggggtgtcagc
cggggtcaacacgacggaaactacagccccggaaagtacccgaacaacggcacaaactct
gactttggaagtcccggctccagctacggcagccccggctccagcttcgggtcgaggcag
ggagacttccccgtgagcctggacggttcctcggaggctgtgcggaaggtccgggttgtc
aaacaggagtctggcgggctggggatcagtatcaagggggggcgagagaaccggatgcct
atcctcatctccaagatcttcccggggctggccgccgaccagagccgggctctccgggtg
ggggacgcgatcttgtcggtgaacgggaacgacctccgggaggcgacgcacgacctggcg
gtgcaggcgctgaagaaggcggggaaagaggtgacgctggaggtgaagtacatccgcgag
gtctctccgctcttcaagaagccgtccttggtggccgacctgccgtgggacggcgtccgg
ccgcagtcgcccagctacagcggcagcgaggactcggggtcgcccaaacacagcggctcc
tcctcgtccaaagacagaaaggtcatcagcctgaggatgtgcttcatcagcaggaacctc
acgatgccagatctggagaacagactcctggagctccactcccccgacggccagcacacg
gtggtgctgcgctgcaaagacggcccctccgccagctcctggttcaccgccatccacacc
aacatcgccgccctgctgccacagaccctggctcacatcaacgcctacctgggggcctcg
tcctcgacctccacacacccccacctcaaacacatcggctggttggctgagcaggtgcag
ctggagggcggacggcagcagtaccgaccgctggtcatggctctgacggagaaggacatc
ctgctgtttgagtcggtgccgtggaacagagagtcttggtccatgcctctgctcacacac
ccactgttagccaccagactggtccactctggcagtgcacgggaatctcccgcccagggg
gcagacctggtgttcgccactcggacgggcacgggccggggcatcgagtcgcacatcttt
cgagtggagacccactgggatctttcttcgtggacgcgagcgctcgtgcagggagcgcac
gccgccgccgagctcatcaaagaggtctctatcggctgcacgttgaaccggcaggacgtt
cggctgacgctgcactacgagaagggcttcaccgtgacgagagagccggtcgacccgtcg
ggcggcgccgtgctgtacagatacccctacgagaagcttaaaatgtctgctgacgatgga
atacgcaacctttaccttgacttcgggggtccagagggagaaatggtgtttgacctccac
tctggtccaaagcccgtggtgttcgtcctccactccttcctgtcggccaagctcactcgc
atgggcctgctgacgtga
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