Hippoglossus stenolepis (Pacific halibut): 118109216
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Entry
118109216 CDS
T08308
Symbol
chd2
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 2
KO
K20091
chromodomain-helicase-DNA-binding protein 2 [EC:5.6.2.-]
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
hsp03036
]
118109216 (chd2)
Chromosome and associated proteins [BR:
hsp03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
118109216 (chd2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_Hrp3
CDH1_2_SANT_HL1
Helicase_C
CHD1-like_C
Chromo
ResIII
HDA2-3
Motif
Other DBs
NCBI-GeneID:
118109216
NCBI-ProteinID:
XP_035012030
LinkDB
All DBs
Position
5:16065447..16093168
Genome browser
AA seq
1817 aa
AA seq
DB search
MMKNKSEKHEDEGSTRSNASSNSASEESNHSASESGSRSESEHGSVRRRSHNSESNSSSE
SESRSESGSESAESKSQQNTAEVKDKPVRKKERLADVKKMWEEHPDVYGVRRSNRSRQEP
ARLNVGAGGSSDSESESPKRKTSRAKKKENIWKDDDSNDDDEEEEEEEEASDSTDSEQEE
KKIRSRRLPARRPQTKSSSVKKQISQKGKKSRKAESSGEDDDNDDDEDDDDDDDDEEDTP
KRQTRGRGATKVKSYKEDQHDIETDSDDLIEMTGDAGEELQDDDSETIEKVMDTRISKKG
ASGASTTLYAVSENGDPSEGFDPENDEGETQHLIKWKGWSYIHNTWESMDSLIQQKVKGL
KKLDNYIKKSEELNSWLRRASPEDVEFHNCQQELTCDLKKQFQIVERVIATKTGKTPGTI
EFPSHSHKMPSSNEPEYLCKWMGLPYSDCSWEDGALVRSLKFGSCIDSFINRNSTKTVPS
KECKVLKQRPRFVALKKQPSYIGSETLELRDYQLDGLNWLAHSWCRCNSVILADEMGLGK
TIQTISFLSYMFHHHQLYGPFILVVPLSTLSSWQREFETWAPDMNVVVYLGDVMSRKTIR
DYEWVNHQTKRIRFNALLTTYEIVLKDKGVLGNINWAFMGVDEAHRLKNDDSLLYKSLME
FRSNHRLLITGTPLQNSLKELWSLLHFLMPDKFHSWENFEDEHGKGRDNGYHSLHKVLEP
FLLRRVKKDVEKSLPAKVEQILRVDMSAQQKQFYKWILTRNYRALTKGPRGSSSGFLNIV
MELKKCCNHSFLIRQPEDGDTETQQEHLQSLVKGSGKLVLLDKLLTRLRQRGNRVLIFSQ
MVRMLDILAEYLAKNRYPFQRLDGSIKGEIRKQALDHFNAEGSEDFCFLLSTRAGGLGIN
LASADTVVIFDSDWNPQNDLQAQARAHRIGQKKQVNIYRLVTKGTVEEDIIERAKKKMVL
DHLVIQRMDTTGRTVLDSNSGNTNSNPFNKEELTAILKFGAEELFKEAEGEESEPQEMDI
EEILRLAETRESDLGSSATDELLSQFKVANFSSMEETTPELDDKTISEWDNIIPAEQRRK
IEEEEKQREMDDIFMLPRSRSSNKRARANDSDSDVGSKLKNHSSGSESETDDSDDDKKPK
KRGRPRARKNNVEGFTDAEIRRFIKAYKKFGSPLERLEAIARDSELVDKSIADLKRLGEL
IHSSCVTAVQEHEEHLKENPVEAKGPGKRRGINIKISGVQVNAKTIIQHEEEFEPLHKVV
PSNPAERNKFQLTCRVKVAHFDVDWDLQDDTQLLLGTYEHGFGNWDLIKTDPDLKLADKI
LPDDPSKKPQGKQLQARAEYLLKLLKKEQDNADVSKTGEEVKVKKRKPRVKKENKILKDE
QGNDISSPRLSDNPSEEGEVKDDGTEKSPNKKRQKKKDNKENKEKQGTSKKEKDGDKEKK
GTKPKKEKAKGAKGKKTQGPVHITAGSDPVPIEGKEDDELDQETFSICKERMRPVKKALK
QLDKPDEGLSDQEQLQHTRTCLLKIGDRITECLKFYNDPEHVKIWRRNLWIFVSKFTEFG
ARKLHKLYKMAQKKRSHEEEKEQKKKDDSSGRLKSFRPEPSGSSRESMGTKSASQPGSHG
HHREPYNAGNKRHFGNDDRGDWQRDRDRKYNYPGNSNQSWQGERHHQYDHNRYKDHYGDR
RPHGDMYRSSSGYRSNSSPRKRPYEQYSNDRDHRGSRPYYDRNPDPKRRRTEEFRPNYHQ
GREVPPQDLRRMPEHRPAGPPGQDHYSRPFHPDKPPPLLDPRSPQAQKSPQDSRSPLERP
VELNAAADPNWNNRNKT
NT seq
5454 nt
NT seq
+upstream
nt +downstream
nt
atgatgaagaataagagtgagaagcacgaggatgaaggatccactcggagcaatgcgtca
agcaattcagcttcagaggagtccaaccactctgcgtcagagtccggaagtcgctcagag
agtgagcatggcagcgtgaggaggagatcccacaactcagagtccaacagctcctcggag
tccgagagtcgctcggagtcagggagcgaatcagctgagtccaaatcccagcaaaacaca
gcggaagtcaaagacaagccagtcaggaagaaggagcgtctggctgatgtgaagaagatg
tgggaggagcatcctgatgtgtacggggtcaggaggtcaaaccgcagtagacaggagccg
gctcgtttaaacgtcggagctggggggagcagtgactctgagagcgagagtcccaagaga
aagacgtcacgggctaagaagaaagaaaatatctggaaagatgatgactcaaatgatgat
gatgaagaggaggaggaggaggaggaggcttccgacagtacagacagtgagcaggaagag
aaaaaaattagatccagacgacttcctgctagaagacctcagaccaaatcatcatccgtc
aaaaagcagatctctcagaagggaaaaaagtccagaaaagcggaatcatcgggtgaagac
gatgacaacgacgacgatgaagacgacgatgatgatgatgacgatgaggaagacactcca
aagaggcagacccgaggaaggggcgcaacgaaagtcaaaagttacaaagaggaccaacac
gacattgaaacagactctgatgacctgatagaaatgacgggggacgcaggcgaggagctg
caggacgatgacagtgaaacaattgagaaggttatggacaccaggatcagcaaaaaagga
gcctccggagcttccacgaccttgtacgccgtctcggaaaatggggacccgagtgagggc
tttgacccagagaacgatgagggggagactcagcatctgatcaagtggaagggctggtcc
tacatccacaacacatgggagagcatggactcactgatccagcaaaaagtcaagggactc
aagaaactggacaactacataaagaaaagcgaggagctcaattcatggttgaggagggct
tcacccgaggacgtcgaatttcataactgccaacaggagctcacttgtgacttgaagaag
caatttcagattgtggagcgtgtcatcgcaacgaaaacaggaaagacacctggaaccata
gaatttccctctcatagccacaagatgccatcctccaatgagccggagtatctctgtaag
tggatggggttaccttattcagattgcagctgggaagacggagcattggtcagaagtttg
aagtttgggagctgcatagacagcttcatcaaccgcaactcgaccaaaaccgtcccgtcc
aaagaatgcaaggtgttaaaacaaaggccgcggtttgttgctctgaagaaacaaccctcg
tacattggaagtgagaccctcgagctgagagattatcagctggatggcttgaactggctc
gctcactcctggtgcaggtgcaatagtgttatccttgctgatgagatgggactgggaaag
accatccagaccatctccttcctgtcctacatgttccaccaccaccagctctacggaccc
ttcatattggtggtgcctctgtccacactcagctcctggcagagggagtttgagacctgg
gccccggatatgaacgtggtggtctacctcggtgacgtcatgagcaggaaaacgatccgt
gactatgagtgggtgaaccatcaaacgaaaagaatccggttcaatgcactattaaccacc
tatgagattgtacttaaagacaagggtgtgctcgggaacataaactgggctttcatgggt
gtggatgaagctcacaggctgaagaacgacgactccctgctgtacaaatcattaatggag
ttccggtccaaccacaggctcctcattaccggcactccgctgcagaactccctcaaagag
ctctggtccctgctgcacttcctcatgcctgacaagttccactcctgggagaattttgag
gacgaacatgggaaaggaagagacaatggttatcatagtcttcacaaagtcctcgagccc
ttcctcctccgacgcgtcaagaaagacgtggagaaatctctgcctgccaaggtggagcag
atccttcgtgtcgacatgtcagcacagcagaaacaattttacaagtggattttaacaagg
aattacagagctcttaccaaaggcccccgaggcagctcctctggcttcctgaacatcgtc
atggagttgaaaaaatgctgcaaccatagtttcctcattagacagcccgaggacggagac
actgagacacaacaggaacacctgcagagtttagtgaaaggcagcgggaagctggtgctg
ctggacaagctcctgaccagactccgacagcgaggaaaccgggtcttgatcttctcgcag
atggtcaggatgttggacattctggctgaatacctcgccaagaaccgatacccattccag
cgactggacggttccatcaagggagaaattcgaaagcaagcacttgaccactttaatgca
gaaggatcagaggacttctgcttcctgttgtccaccagagccggaggtttagggattaac
ttggcctccgcagacactgttgtcatcttcgactctgactggaaccctcaaaacgacctg
caggcacaagcccgggctcacaggatcggacagaagaaacaggtgaacatttaccggctg
gtcaccaaaggaacagtggaggaggacatcattgagagggcgaaaaagaagatggttttg
gaccatctcgtcattcagagaatggacaccactggtcggactgtactggacagcaactca
ggaaacactaattcaaacccattcaacaaagaagaactgaccgctattctcaagtttggt
gcagaggaacttttcaaagaggccgagggagaggagtctgaaccacaggagatggatatc
gaagagatcctgaggttggctgaaacaagagaaagtgacctgggctcaagtgctacagac
gaacttctctcccagttcaaggtggctaatttctccagcatggaggagaccactcccgag
cttgacgacaaaacgataagcgagtgggacaacatcatccccgcggagcagcggcgcaaa
atcgaggaggaggagaagcagcgggagatggacgacatcttcatgctgcccagaagcagg
agctcgaacaagagggctcgagccaatgacagcgacagtgatgtgggctccaagctgaag
aaccactcttcgggctctgagagcgagacggacgacagtgacgatgacaagaagccaaag
aagagaggaagacctcgagcccgcaaaaacaacgtggagggttttactgatgcagaaatt
cgcaggttcatcaaggcatacaagaaatttgggtctccccttgaaaggttagaggcgatc
gcccgagactctgagctggtggacaaatccatcgcagacctgaagagactcggtgaactg
atccatagcagctgtgtgactgcagtgcaggagcacgaggagcacctcaaagagaaccct
gtagaagccaaaggtccggggaaacggcgagggattaatatcaagatctcaggagtgcag
gtcaacgccaagaccatcatccagcacgaggaagagtttgagccgctgcacaaagtggtg
ccctccaaccctgcggagagaaataagttccagctgacatgccgggtgaaggtggctcac
tttgatgtggactgggatctgcaggacgacactcagctcctgcttggcacctatgagcac
ggcttcggcaactgggatctgataaagacagatcccgacctgaaactggctgataaaatt
ctccctgacgacccgagcaagaagcctcagggcaaacagttgcaggcgagagccgagtat
ctgctcaagctgctgaaaaaagaacaagacaatgcagacgtgtctaaaacaggggaggag
gtcaaagtgaagaagaggaagccccgggtgaaaaaggagaacaagattctcaaggatgag
cagggcaacgacatctcctccccccgcctgtctgacaacccgtcagaggagggtgaagtc
aaggatgatggaacagagaagtccccgaacaagaagagacagaagaaaaaggataacaaa
gagaacaaagaaaaacagggaacttctaagaaggagaaggacggagacaaagaaaagaag
ggcaccaagcccaagaaagaaaaggctaaaggagccaaagggaagaagacccaaggtcca
gttcacatcacagctggttctgatcctgttcccatcgaaggaaaggaggatgatgaactc
gaccaggaaactttcagtatttgtaaggagcgcatgaggccggtgaaaaaggccctgaag
cagctggataaaccagacgagggtctctctgaccaggagcagctccagcacacacgcaca
tgcctgctgaagattggagaccgcatcacagagtgccttaaattctacaacgacccagaa
catgtcaaaatatggcgacgaaatctctggatttttgtgtctaagtttacagagtttgga
gcaaggaagcttcacaagctttacaaaatggcccagaagaagcgatcacacgaggaagag
aaggagcaaaagaagaaggacgattcttcagggaggctgaaatctttcagaccagaacct
tctggttctagtcgagagtccatgggaaccaaatctgcatctcagccgggttcccacggg
caccacagagaaccgtacaatgcgggcaataagcggcactttggaaatgatgatcgagga
gactggcagcgggaccgggaccgcaaatacaattaccccggtaacagcaaccagtcatgg
cagggggagcgacatcatcaatatgaccacaaccgctacaaagatcactacggtgaccgg
cgtccacatggagacatgtatcgcagctcaagcggttaccgcagcaacagctcccctcga
aagcggccgtatgagcagtacagcaacgaccgggaccacaggggtagcaggccctattac
gacagaaatccggaccccaaaagaagacgcactgaagaattccgtcccaactaccaccag
ggacgagaggttccccctcaggacctcaggaggatgccggagcacaggccagcgggtcct
ccggggcaggatcactacagccgacccttccaccctgacaaacctcctccgctcttggac
cctcgctccccgcaggctcagaagtctccccaggattcccgctcgccactggagcgacct
gtggagctgaacgcagcggcagaccccaactggaacaacaggaacaaaacataa
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integrated database retrieval system
