Hippoglossus stenolepis (Pacific halibut): 118109310
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Entry
118109310 CDS
T08308
Symbol
irf7
Name
(RefSeq) interferon regulatory factor 7
KO
K09447
interferon regulatory factor 7
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp04620
Toll-like receptor signaling pathway
hsp04621
NOD-like receptor signaling pathway
hsp04622
RIG-I-like receptor signaling pathway
hsp04623
Cytosolic DNA-sensing pathway
hsp05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
118109310 (irf7)
04621 NOD-like receptor signaling pathway
118109310 (irf7)
04622 RIG-I-like receptor signaling pathway
118109310 (irf7)
04623 Cytosolic DNA-sensing pathway
118109310 (irf7)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
118109310 (irf7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hsp03000
]
118109310 (irf7)
Transcription factors [BR:
hsp03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
118109310 (irf7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IRF-3
IRF
CIS_tube
Motif
Other DBs
NCBI-GeneID:
118109310
NCBI-ProteinID:
XP_035012232
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All DBs
Position
5:20699580..20704631
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AA seq
430 aa
AA seq
DB search
MQSHQKPQFASWLIEQVETGQYTGLRYVTQNKFRVPWKHNSRKDCKDEDSKIFRAWAVAS
GKIHEFPTDKARWKTNFRCALNNLSVRFKMIEDNSKNSEDPHKIYQIKNTEHKQTDLPKQ
DSQEDSVMTPDIYSSPTELFPLGNEYNLENNFTALDLGNQPIEEQLWVENYCQPDPAVLG
SYTVAAENHPQALPDQQSFYEVNPTPVVSSGQQPSIYDLEVSIHYRKKEMLKVTLATACL
QLHYQQEAPDLNGQHLCFPSTDGLLDHKQIEFTNRILNSIQRGLLLEVCETGIYAWRQDR
CHVFASTSDPSVALPDPRKLPQNTRVELLSFEKYVNDLKKFKENNGGSPEYVINMCFGEK
FPDGKALEKKLITVKVVPLICRHFHEMAQMEGASSLHSANVSLQMSHNSLYDLINSVFGL
PIDVDPTFLH
NT seq
1293 nt
NT seq
+upstream
nt +downstream
nt
atgcaaagccaccaaaagcctcagtttgccagctggctcatagagcaggtggagacgggc
cagtacacaggtctgcgctatgtgacccaaaacaagttcagagtcccctggaagcacaac
tccagaaaggactgcaaggatgaggacagtaaaatatttcgggcgtgggctgtggcgagt
ggtaaaatccacgagttccccactgacaaggcccggtggaaaaccaacttccgctgcgcc
ctcaacaacctctcggtgcgcttcaagatgatagaggacaactccaagaactcagaagac
ccccacaaaatctaccaaatcaagaacactgagcacaaacagacagacttgccaaaacag
gactcccaggaggactcagtcatgactccagatatctacagctctcccacagagttattc
cccctaggaaatgagtacaatctggagaataatttcacagccttggatctgggcaaccaa
ccaatagaggaacaactgtgggtggagaactactgccagcccgatccagccgtccttgga
agttacactgttgcagcagagaaccacccgcaagctttaccagatcaacagtctttctac
gaggtaaatcctacaccagtcgtcagctcaggtcagcagccaagtatctatgacctggag
gtctccatccactacaggaaaaaagaaatgcttaaggtcacgttggccaccgcatgtctc
cagctccactaccagcaagaggcccccgacctcaacggccaacacctctgtttcccctcc
actgacggcctgctcgaccacaaacagatcgaattcaccaaccgcatcctcaacagcatc
cagaggggtctcctgctggaggtctgtgagactggtatctacgcctggaggcaggacagg
tgccacgtgttcgccagcaccagtgaccccagtgtggctctgccagaccccagaaagctg
ccccagaacactagggtagagctcctcagcttcgagaagtatgtgaatgacctgaagaag
tttaaagagaacaacgggggctctcctgaatacgtcatcaacatgtgctttggagagaag
tttcctgatggaaaagctttggagaagaaactcatcactgtcaaggtggttcctctgatc
tgtcgacactttcatgagatggcccagatggagggcgcttcgtctcttcacagcgccaac
gtcagcctacagatgtcgcacaacagcctctacgatctcatcaactccgtgttcggcctg
ccgatagatgtggacccgaccttcctgcattag
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