Hippoglossus stenolepis (Pacific halibut): 118109352
Help
Entry
118109352 CDS
T08308
Symbol
arntl1a
Name
(RefSeq) aryl hydrocarbon receptor nuclear translocator-like 1a isoform X1
KO
K02296
aryl hydrocarbon receptor nuclear translocator-like protein 1
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hsp03000
]
118109352 (arntl1a)
Transcription factors [BR:
hsp03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
118109352 (arntl1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAS_11
PAS
PAS_3
HLH
PAS_9
Per3-like_PAS-A
PAS_4
bHLH_INO2
PAS_2
bHLH_NCOA
bHLH_NPAS4
PAS_8
bHLH_HIF1A
Motif
Other DBs
NCBI-GeneID:
118109352
NCBI-ProteinID:
XP_035012297
LinkDB
All DBs
Position
5:26764598..26787343
Genome browser
AA seq
638 aa
AA seq
DB search
MEGNDFNTEAVMNICDDLMADQRMDISSTMTDFMSPGSTDLISSSISTPGMDYTRKRKGS
TTDYQIDGFSFDDMDPDKDKLGSDQQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPT
CNAMSRKLDKLTVLRMAVQHMKTLRGAANPYTEANYKPSFLSDDELKHLILRAADGFLFV
VGCDRGKILFVSESVYKILNYSQNDLIGQSLFDYLHPKDIAKVKEQLSSSDTAPRERLID
AKTGLPVKTDITPGPSRLCSGARRSFFCRMKCNRPSVKVEDKDFPSTCSKKKADRKSFCT
IHSTGYLKSWPPTKMGLDEDNEPDNEGCNLSCLVAIGRLHPHIVPQPSLADIRVKPTEYV
SRHAIDGKFVFVDQRATAILAYLPQELLGTSFYEYFHQDDIGHLAECHRQVLQMREKINT
NCYKFKIKDGSFITLRSRWFSFMNPWTKEVEYIVSTNTVVSCPIMEGSEYPQSAASPQSM
DSALTSEGGGRRALQTVPGIPGGTRAGAGKIGRMIAEEVMEIQRIRGSSPSSCGSSPLNI
TSTPPPDTCSPGGKKIQNGGTPELPSTGIIPGPDSVGYPYSNQSIMSDNSHLSIDIMDEP
GSSSPSNDEAAMAVIMSLLEADAGLGGPVDFSDLPWPL
NT seq
1917 nt
NT seq
+upstream
nt +downstream
nt
atggaaggaaatgattttaacacagaggcagtgatgaacatctgtgatgacctgatggca
gaccaaaggatggacatctcgtcgacaatgactgacttcatgtcccctggctccaccgac
ctcatctccagctccatcagcacgcctggcatggactacacgcgcaagaggaagggcagc
accaccgactaccaaattgatggcttctcattcgatgacatggacccagacaaagataag
cttggaagtgaccaacagggccggattaagaatgccagagaggctcacagccagatcgag
aagcggcgcagggacaagatgaacagcttcatcgacgagctggcgtcgctggtgcccacc
tgtaacgccatgtcccgcaagctcgacaagctgacggtcctgcgcatggccgtccagcac
atgaagacactcagaggtgcagccaacccgtacacagaggccaactacaagccttccttc
ctgtcagatgatgaactcaagcacttgatactaagggctgctgatggtttcttgtttgtt
gtcggctgcgatcgcggcaaaattctctttgtttctgaatcggtctacaaaatactaaac
tacagccagaacgacctgataggtcagagcctgtttgactaccttcaccccaaggacatt
gccaaggtcaaagagcagctgtcctcttccgacacggccccacgagagaggctcatcgac
gctaaaactggtcttccagtgaagacagacatcactcctggtccgtctcgactctgttct
ggagccagacggtcatttttctgcaggatgaagtgcaacaggccttctgtcaaagtagaa
gataaagactttccctccacctgctcgaagaaaaaagcggaccgcaagagcttctgcacc
atccacagcacgggctacctgaagagctggcctcccaccaagatgggtctggacgaggac
aacgagcccgacaacgagggctgcaacctgagctgcctggtggccatcggccgcctgcac
ccccacatcgttccccagcccagcctggcagacatccgggtgaagcccacagagtacgtc
tcccggcacgccatcgatggcaaattcgtcttcgtggaccagagagccacagccatcctc
gcctacctgccccaggagctgctgggaacatccttctatgagtatttccaccaggacgac
atcggccacttggctgagtgccacagacaagtgctgcagatgagagagaagatcaacacc
aactgttacaaattcaagatcaaagatggctccttcatcacgctgaggagccgatggttc
agcttcatgaatccctggaccaaggaggtggagtacatcgtctccaccaacaccgttgtg
tcgtgtccgataatggaaggatcagaataccctcagtctgctgcctcacctcagagtatg
gacagtgctctcacctcagagggtggcgggaggcgggcgctgcagacggtacccggcatc
ccgggcggcacgagagcaggagccggaaagatcggacgcatgatcgcggaggaggtgatg
gagattcagaggatccgaggctcctccccctccagctgtggctcgagccctctaaacatc
accagcacccccccacccgacacctgctcccctggaggaaagaagattcagaatggaggg
acacccgagctgccgagcacggggatcattcctggacctgattctgtcggctacccgtac
tccaaccagtccatcatgagtgacaactcccacctgagcatagacatcatggacgagccc
ggctccagcagccccagcaacgacgaggcggccatggcggtcatcatgtccctgctggag
gcggacgccggcctgggcggacccgtggacttcagcgacctgccctggcctttgtga
DBGET
integrated database retrieval system
