Hippoglossus stenolepis (Pacific halibut): 118109356
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Entry
118109356 CDS
T08308
Symbol
cdhr5b
Name
(RefSeq) cadherin-related family member 5
KO
K16505
cadherin-related family member 5
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
hsp04515
]
118109356 (cdhr5b)
Cell adhesion molecules [BR:
hsp04515
]
Cadherins
Cadherin related
118109356 (cdhr5b)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_CELSR2_9th
Motif
Other DBs
NCBI-GeneID:
118109356
NCBI-ProteinID:
XP_047195732
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Position
5:complement(4786576..4802193)
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AA seq
813 aa
AA seq
DB search
MDVVQPHLTVRTSFILILLSLLQMSSGNYCSAPMPVLFAENNKVDDVVTTITVQPGVTLA
LRPPSNNLFKLRGNQLLAAMVFDYETEKRQTALITCTVTASGIERCLRRIPWDVEFMAVA
QVLEVQEKLNILVLLENMNDNAPVFDQSLYRVNVSEMSPVGTTVGHFAATDLDQHNQLFY
TLTSESQNSFELKSPTTPDLVIKSPLDYDTVKNEKLVLCAQDTPLTTSDNRTSFTATSTI
MVTILDADNRPPWFQPCTKHEIGAAVICQSAGYTGSVIINEQENGVLPLKPGPLYAIDGD
TGINEEMTYSFLSGNEENLFKINANTGNITMLKPAKALDTINLIVLAAQSKNGNQVATTT
VSVQVKSHHHPQFQKPLYEGVVSSVGSMAMDGDKPLYIHATDEDYNGNPNPNIVYTINGS
SDFSIISGYLFMTKDLQATTLSLQVVATDESNDQFDTAQLNVQVKSGLTTTSFPLSTTNI
MTTTPIGESTTSSKTTEDVVSTTKPNVTTDSSISTTIPSTSASIISTTHPSISTATEGSV
STTKASMTTEGSVSTTKASMTTEGSVSTTKASMTTEGSVSTASTAHPPTVQDLISRSDFI
IVSTGSYGQEDMIALGVTLGVLLLVCLVVIGVLSHRMRKGKADWKKIYEVSVFRSSLGQS
SGGLKKGVQYTNEAFQNDEDGGSTGSSGPQGGVSTEAIVRSSLPLHALLPDDTNEAGLDT
AENEKVKPILTKERRIEEGYKAVWFKEDIDPNAKEEVVIIPDRREDDSDEEDEPDNKTPK
VNFDDTDLDSGLGVKMGDRPDDSDDDEAMTSDL
NT seq
2442 nt
NT seq
+upstream
nt +downstream
nt
atggacgttgttcagccacatttaactgtgaggacgtccttcatcttaatacttctgagc
ctgctccaaatgtccagcgggaactactgttctgctcctatgcctgtgctatttgcagaa
aacaacaaagtggatgatgttgtgacaacgataactgtgcaaccaggggtcaccctggcg
ctcaggcccccctccaacaacctattcaagctcagaggaaaccagctgttagctgcaatg
gtgtttgactatgagactgagaaaagacaaacagcactgatcacctgcactgtgacagct
tcaggcattgagaggtgcttgaggagaatcccctgggatgtagagttcatggcggttgcc
caggttctagaggttcaggagaaactcaacattttggtacttctggaaaatatgaatgat
aacgctccagtctttgaccaaagcctctaccgagtcaatgtcagtgagatgtcccctgta
ggaacaacagttggtcattttgctgccacagacctagaccaacacaaccagctcttctac
actctgacatctgaatctcaaaacagctttgaactgaagtcacccaccaccccagacctc
gtcatcaagtcgcctctcgactatgatacagtcaaaaatgaaaaattggtgttgtgcgct
caggacacaccattgacaacatcagataacagaacctctttcactgccacctccaccatc
atggtcaccatcttagatgcggacaacaggccaccgtggttccagccatgcaccaagcac
gagataggggcagctgtgatctgccagagtgctggatacactggcagtgttatcataaat
gaacaagagaacggagtattaccgctgaaaccaggaccactctatgccattgatggagac
accgggataaatgaggagatgacatactcatttcttagtggaaacgaagagaatctgttt
aagatcaacgcaaacacagggaacatcaccatgttgaagccggccaaagctttggataca
atcaatctgattgtgctggctgcccagagcaagaacggtaatcaggttgccaccaccact
gtcagtgttcaggtgaagagccaccaccatccacagtttcagaagcctctgtacgagggg
gtcgtcagttcagtgggctccatggccatggacggggataagccgctgtacatccacgct
acagatgaagactacaatgggaatccaaatcctaacatcgtgtacaccattaatgggagc
agtgatttctctatcattagcggctatttattcatgactaaggatctccaagccaccaca
ttatccctacaagtggtcgcaacagacgagtcaaacgatcaatttgatacagctcagctc
aatgtgcaggtgaaatcaggtctcaccaccaccagtttccctttgagcaccacaaacatt
atgaccacaacgcccataggggaatccaccacctccagcaagaccactgaggatgttgtg
tccaccaccaaaccaaatgtgaccactgacagcagcatctcaactaccatccccagtacc
agtgcaagcataatctccaccacacaccctagtatttccactgccaccgaaggcagcgtt
tcaaccactaaagccagtatgaccactgaaggaagcgtttcaaccactaaagccagtatg
accactgaaggaagcgtttcaaccactaaagccagtatgaccactgaaggaagcgtctcc
actgccagcacagctcatcctcccacagtgcaggacttgatttcacgttctgattttatc
atagtgagcacaggcagctatgggcaggaggacatgatagccctcggtgtgacactgggt
gtcctgctgcttgtctgtctggtggtcattggtgtgctcagccatcgcatgaggaaaggc
aaagcagactggaagaagatctacgaagtcagcgtgtttcgaagctctctgggtcaaagt
tcaggtggtctgaagaagggtgtccaatacaccaatgaggccttccagaacgatgaagat
ggaggaagcacaggctctagtggcccacaagggggagtgagcacggaggccattgttagg
tcttcactgccactgcacgccctcctgccagatgataccaatgaggcgggcttagacacg
gccgaaaatgagaaggtgaaacccatcctgaccaaggagaggcgcattgaggagggatac
aaggcagtttggtttaaggaggacatcgaccccaatgccaaggaggaggtggtgattatc
ccagacagaagagaggatgacagtgatgaggaagacgaacctgacaacaaaaccccaaaa
gtcaattttgatgacacagatctggacagcggacttggggtaaagatgggggatcggcca
gatgactcagatgatgatgaagcaatgacctctgatctgtga
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