Hippoglossus stenolepis (Pacific halibut): 118109391
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Entry
118109391 CDS
T08308
Symbol
pparab
Name
(RefSeq) peroxisome proliferator-activated receptor alpha b isoform X1
KO
K07294
peroxisome proliferator-activated receptor alpha
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp03320
PPAR signaling pathway
hsp04920
Adipocytokine signaling pathway
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
118109391 (pparab)
03320 PPAR signaling pathway
118109391 (pparab)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hsp03000
]
118109391 (pparab)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
hsp03310
]
118109391 (pparab)
Transcription factors [BR:
hsp03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
118109391 (pparab)
Nuclear receptors [BR:
hsp03310
]
1. Thyroid hormone like
1C. Peroxisome proliferator-activated receptor (PPAR)
118109391 (pparab)
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Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
118109391
NCBI-ProteinID:
XP_035012369
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Position
5:complement(9835048..9868405)
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AA seq
469 aa
AA seq
DB search
MVDMESHYHPPSPLEDSVLGSPLCTDDDFMEGMEELQDISQSIDNDALSSFDVPEYQSSS
NGSEGSTVLDALTPASSPSSVVYGMSLGQEEFSSTSSSLSLECRVCADRASGYHYGVHAC
EGCKGFFRRTIRLKLEYDKCERRCKIQKKNRNKCQYCRFQKCLSVGMSHNAIRFGRMPQS
EKLKLKAEMVTGDREVGDPQVADQKTLARQIYEAYLKNFNMNKAKARTILTGKTSTPPFV
IHDMETLQLAEQTLVAKMVGSVGSIKDREAEVRIFHCCQCTSVETVTELTEFAKSVPGFS
SLDLNDQVTLLKYGVYEALFAMLASSMNKDGLLVAYGSGFITREFLKSLRRPFSDMMEPK
FQFAMKFNGLELDDSDLALFVAAIICCGDRPGLVNVEHIERMQESIVQVLQLHLLSNHPD
DTFLFPRLLQKLADLRQLVTEHAQLVQEIKKTEDTSLHPLLQEIYRDMY
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atggtcgacatggagagccactaccatcccccttctcccctggaggactcggtgctgggc
agccccctgtgcaccgatgacgacttcatggaaggcatggaggagctccaggacatctcc
cagtccattgacaatgatgccctcagctccttcgatgtccctgaataccagtcctccagc
aatggctcggaagggtccactgtcctagatgccctgacgccggcgtccagcccctcgtcg
gttgtttacgggatgtcattgggccaagaggagttctcgtctacctcctcatcgctcagt
ctggagtgtcgagtgtgtgctgaccgcgcctcgggctaccactacggagtccacgcctgc
gagggctgcaagggttttttccggcggaccatccgtctgaagctggagtacgacaagtgt
gagcgccgctgcaagatccaaaagaagaaccgcaacaagtgccaatactgccgcttccag
aagtgcctgtcagtgggcatgtcccacaatgccatccgttttggtcggatgcctcagtcg
gagaagctaaagctgaaggcggagatggtgacgggggacagagaggtgggagaccctcag
gtcgctgaccagaagacgctggccaggcagatttacgaggcctacctcaagaacttcaac
atgaacaaggccaaggctcgaaccattctcaccggaaagaccagcacccctccgttcgtc
atccatgacatggagaccctccagctggcagagcagacgctggtggccaagatggtcggc
tctgtgggatcgataaaggacagggaggcagaggttcggattttccactgctgccagtgc
acgtcggtggagaccgtcacggagctcacagagtttgcaaagtccgtccccgggttctca
agcttggacctcaacgatcaggtgactcttttgaaatacggagtgtacgaggctctcttc
gccatgctcgcctccagcatgaacaaggacggcctcctggtggcgtatggctcaggcttc
atcacgcgggaattcctcaagagcctgcggcgaccgttcagcgacatgatggagccaaag
ttccagtttgccatgaagttcaacgggctggagctggacgacagtgacctggctctgttc
gtggctgctatcatctgctgtggagaccgaccgggcctggtgaacgtggagcacatcgag
cggatgcaggaaagcattgtgcaggtgctgcagctccacctgctgtccaatcacccagat
gacactttcctcttccccaggctgctgcagaaactcgccgacctccggcagctcgtcact
gagcacgcacagctagtgcaggagatcaaaaagacagaggacacgtcgctgcacccgctc
ctgcaggagatctacagagacatgtactga
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