Hippoglossus stenolepis (Pacific halibut): 118109452
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Entry
118109452 CDS
T08308
Name
(RefSeq) unconventional myosin-Va
KO
K10357
myosin V
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
118109452
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hsp03019
]
118109452
04131 Membrane trafficking [BR:
hsp04131
]
118109452
03029 Mitochondrial biogenesis [BR:
hsp03029
]
118109452
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
hsp04812
]
118109452
Messenger RNA biogenesis [BR:
hsp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
118109452
mRNA cycle factors
P-body specific factors
118109452
Membrane trafficking [BR:
hsp04131
]
Others
Actin-binding proteins
Myosins
118109452
Mitochondrial biogenesis [BR:
hsp03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
118109452
Cytoskeleton proteins [BR:
hsp04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
118109452
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
Myo5a
DIL
IQ
Myosin_N
AAA_22
MYO6_lever
AAA_16
NPHP3_N
Motif
Other DBs
NCBI-GeneID:
118109452
NCBI-ProteinID:
XP_035012467
LinkDB
All DBs
Position
5:13186774..13203180
Genome browser
AA seq
1821 aa
AA seq
DB search
MAASELYSRYARVWVPDAAEVWKSAELIKDYTAGDLKLSLQLEDGTEVEYKIDPRTNDLP
PLRNPNLLVGENDLTSLSYLHEPAVLHNLKVRFIDSKLIYTYCGIVLVAINPYESLPIYE
ADIINAYSGQNMGDMDPHIFAVAEEAYKQMARDERNQSIIVSGESGAGKTVSAKYAMRYF
ATVSSSGETSVEDRVLASSPIMEALGNAKTTRNDNSSRFGKYIEIGFDKKHCIIGANMRT
YLLEKSRVVFQAREERNYHIFYQLCASSHLPEFKAFKLGCADDFHFTNQGQSPVIDGVDD
AKEMNNTRKAFSLLGISESDQMEIYQILASILHLSNVEIKDQSADRSSISPDDVHLMVFC
ELMGVPCEEMAHWLCHRTLKTTTETYVKSFSKVNAVNGRDALAKHIYAKLFSLIVGSINN
ALKSAAKQHSFIGVLDIYGFETFDVNSFEQFCINYANEKLQQQFNLHVFKLEQEEYMKEE
ISWTLIDFYDNQPCIDLIEAKLGVLDLLDEECKMPKGSDDTWAQKLYNTLLKQNVHFDKP
RLSNRAFIIHHFADKVEYQCEGFLEKNKDTVNEEQINVLKNSQFDLLLKLFEEDEKAKGS
TKKRTGVTGRAGPSQKDNKKTVGLQFRQSLRLLMDTLNATSPHYVRCIKPNDDKSPFTLD
PMRAVQQLRACGVLETIRISAAGFPSRWTYQEFFRRYRVLMKQKDVLNDRKQTCKNLLEK
LVKDQDKYQFGKNKIFFRAGQVAYLEKLRSDKLRMACVSIQKTIRCWLARKKYLRMKASA
VTIQRYVRGHQARCFVQGLRRTRAAIVIQRNVRMWVNRRHYQQQRLAAITIQCFLRAYMA
RKQYYKLMFEQKAVVIQKWVKGWLARQHYKRTMAAIVLLQSCVRRIQAKKEFKKLKVEAR
SVEHFKKLNFGMENKIMQLQHKINDQQKGNKELRERLSVVEKTQSVERERQSREIENLRS
SEQKVRAKAEKLPSLLEQLSFLQHELENTRREKEDLEEQTKVYKEQTQQVVEELNMKNSL
LNSEKDELNTLFVEQTQKLTEIKTNVENTKQMEKDFTEERSRYQGLLSEHLHLEERHRDL
KEKMDLSISSSKPGHKRTDSNYSSNSSEFSHSLASTEGEDSSTQKEDETQATVDLPVLLK
LQRRVKELEQEKQSLWQQLDKREEAKQEKAKEVEEQRTVGRTELDLETLKRQELESDNKR
LKQDLNELRKSLTNENSDLMPPDPGTRPYEVLMEQLTSSNDELEMRKEEVLLLRSHMVRQ
EALKHKDSPLGESVKLGLSEIPSFQDIDRSLDIHTLNEDGELWLAYEGLKETNMFLESQM
QEQERVHSEKCQSLLEDVNKLKDEKEQQQKLLAQSLLLPEDARIDASLKHEIIRLTNDNL
ENMDRQEKQDKTIRKLKKQLKFYMKKVGDIEANTQQMIDASAMNAPMRAVNITRKEKEYQ
GMLKYTEGEENRLLKNLVLDLKPRGVAVSLIPGLPAYIIFMCLRYADNVNNDRRVSNLLN
STISSIKGVIKRRGGDFEVVSFWLANSCRLLHCLKQYSGDEVFMTHNTVKQNEQCLSNFE
LSEYQQVFGDLAIQIYCQLIKSMENVMQPLIVASMLEHETIQGVLGSKPTGLRKRSTSFP
EEEAVTVEVLLQRLGVFHTTMSQHGMDPDLIKQVVKQQFYIICAVTLNHLLLRKDMCSWS
KGLQIRYNIWQLEEWLAERDLADCGAKETLEPLVQAAQLLQIKKKTEADAQAICSMCTAL
TTAQILKVLTLYTPVIEFEERVPTAFITTIKNILKDRGESATLMMDGKKIFSVTLPFTPS
TVALETIQVPASLNLSFLTRI
NT seq
5466 nt
NT seq
+upstream
nt +downstream
nt
atggcagcctccgaactgtactccaggtatgcccgtgtatgggtcccagatgcagccgag
gtgtggaagtcagcggagcttatcaaagactacactgctggagacctgaagctgtccctg
cagctggaggatggcacggaggtggaatacaaaatagaccccagaaccaacgacctgcca
cctctaagaaaccccaacctcctggtgggggagaatgatctcacgtcgctcagctacctc
cacgagccagcagtgctgcacaacctcaaagtgcgcttcattgactccaagttgatttac
acgtactgtggaattgtcctggttgccataaatccctatgagagcttgcccatatatgaa
gctgacatcatcaatgcctacagtgggcagaacatgggggacatggacccccatatattt
gcagtggcagaggaagcatataaacagatggccagggatgaaagaaaccaatccatcata
gtgagcggcgagtctggagctggcaaaaccgtctctgctaagtatgctatgcgttacttt
gccacagtcagctcctctggtgagaccagtgttgaggatcgagtcctcgcctccagcccc
atcatggaggcccttgggaatgccaagacaacaaggaacgacaacagcagtcgcttcggg
aagtacattgagattgggtttgacaagaagcattgtataattggtgctaacatgagaacc
tacttactggaaaagtccagagtggtgtttcaggcccgtgaagaaagaaactatcatata
ttctatcagctgtgtgcctcgtcacatctaccagagttcaaagcctttaagttaggttgc
gcagatgacttccactttactaaccagggtcagagcccagtcatagatggagttgatgat
gccaaggagatgaataataccaggaaggccttctcacttttaggaatctctgaaagtgat
caaatggaaatttaccaaattctggcgtctattctccaccttagcaatgtggagattaaa
gatcagtcagcagacagaagcagcatctcgccagatgatgtgcacctgatggtgttttgt
gagctgatgggggttccatgcgaagaaatggcccactggttatgtcacaggacgctcaag
acaaccacagaaacctacgtgaagtctttctccaaagtgaacgcggtcaatggccgagat
gccctggctaaacacatctatgccaaactcttcagcttgattgtgggcagtattaacaac
gccttaaaatctgcagcaaaacaacactcattcatcggtgtgctcgacatttacgggttt
gaaacatttgatgtgaacagctttgagcagttttgcatcaattatgcaaatgagaagctt
caacaacagttcaacctgcatgttttcaaattggagcaagaggagtacatgaaagaggag
atctcatggacattgatcgacttctatgacaaccagccgtgcattgatctaattgaggca
aagctgggggtcctggacctccttgatgaggaatgcaagatgccaaaagggtctgatgac
acatgggcccagaaactgtacaacacccttctgaagcagaatgtccactttgataaaccc
aggttatcaaacagagctttcatcatccatcactttgcagacaaggtggagtaccagtgt
gagggcttcctggagaaaaacaaggacacggtcaatgaggagcagataaatgtgctgaaa
aacagccagtttgatttgcttctgaaactgtttgaggaagatgagaaggcaaagggttcc
actaaaaaacgtactggcgtaactggaagggccggtccgagtcagaaggataacaagaag
actgttggactgcagtttcgacagtctctacgtttgctgatggacacacttaatgctacg
agtcctcactacgtacgctgcattaagccaaacgatgataaatctccattcaccttggac
cctatgagggcagtgcagcagctgcgagcatgtggtgtcctcgagacaatccggatctca
gcagccggcttcccatctaggtggacttatcaagaattcttcagacgttatcgggtcctc
atgaagcaaaaagatgttcttaatgatagaaaacagacatgcaaaaatctcctcgaaaaa
cttgtgaaggaccaggataagtaccagtttggcaaaaacaagatcttcttcagggctggt
caggtggcttacctggagaagctgcgttccgacaagctgcgtatggcttgtgtcagcatc
cagaagactatccgctgctggttggcccgcaaaaagtatctgaggatgaaggcttctgcc
gtaaccattcagagatatgtacggggccaccaagcacgttgttttgttcagggtctacga
agaaccagagcagccattgtcatccagcggaacgtgcgcatgtgggtgaacaggagacac
tatcagcagcagcgcttggcagctatcaccatccagtgcttcttgagggcctacatggca
agaaagcagtattataagttgatgtttgagcaaaaggctgttgtgatccagaagtgggtg
aaaggctggctggccagacagcattacaaacgcaccatggcagctatcgtcctgctgcag
agctgtgtgcgccgcatacaggccaagaaggaattcaagaagctgaaggtggaggcgcgc
tctgttgagcactttaagaagctcaactttggcatggagaacaaaatcatgcagctgcag
cacaagataaatgaccagcaaaaaggaaacaaagagctccgtgagaggctgagtgtggtg
gagaagacccagagtgtggagagagagagacagagcagagagattgaaaacctacgtagt
tccgagcagaaggtcagagccaaggcagagaaacttccctctctgctggagcagctctcc
ttccttcagcatgagttggaaaacacgcgcagagagaaagaagatctggaggagcagaca
aaggtctataaggagcagactcaacaggtagtagaagagcttaatatgaagaacagcttg
ttgaacagtgaaaaagacgaactcaacacattattcgttgaacaaacacaaaagttaaca
gagattaaaaccaacgttgagaacactaaacagatggagaaggacttcacggaagaacgt
tctcgctaccaaggtctgctgagtgaacacctgcacctggaggagcggcacagagacctg
aaagagaagatggatctcagcattagttcaagcaaacctggtcacaagaggacagactcc
aactacagcagtaactcctcagagtttagtcacagcttagcttctacagagggagaggac
agttctacacaaaaagaggatgagacccaggccacggtggacctgccggtgcttctgaag
ctccagagaagagtgaaggagctggagcaggagaaacagtcactgtggcagcagctggat
aagagagaagaagccaaacaagaaaaggcaaaagaggtggaggagcagagaactgttggc
cgaacagaactggatttggagacactgaagaggcaagagttggagtctgacaacaagagg
ctgaagcaggatctgaacgagctgcgaaagtctctgaccaatgagaacagtgacttgatg
cctcctgaccctggtactcggccctacgaggtactgatggaacaactcacctcctccaac
gatgagctggagatgagaaaagaagaagtgctgctgcttcgatcgcacatggtccgccaa
gaagctcttaaacataaggactctccactgggtgagagtgtgaaattaggcctcagtgaa
attccctcctttcaagacattgacagatccctggatatccatactctgaatgaagatgga
gagctatggctggcttatgaaggcttaaaagagaccaacatgttcctggagagccagatg
caggagcaggagcgtgttcacagtgagaagtgccagagtcttctcgaggacgtgaacaag
ctgaaggatgagaaggagcagcagcagaagctgttggctcagagcctccttctgcctgaa
gacgccagaatcgacgcgagcctgaagcatgagatcatacggctcaccaatgataacctg
gagaacatggatcggcaagaaaaacaggacaaaaccatacgcaagttgaaaaaacaactt
aaattttacatgaaaaaagttggcgatattgaagcaaacactcaacaaatgatcgatgcc
tctgcaatgaacgctcccatgagagctgttaatatcacccgcaaggagaaagagtatcag
ggcatgttgaagtacacggagggtgaggagaaccgcctgctaaaaaatctggtcttagat
ctgaagcctcgcggcgtagcagtaagcttgattcctgggcttcctgcctacatcatcttt
atgtgcctccgatacgcggacaatgtgaataatgaccggagagtcagcaatctgctcaat
tccaccatcagcagcattaaaggggtcatcaagagacgaggaggtgattttgaagtagtt
tccttttggttggccaacagctgccggctgttgcactgtttgaagcagtacagtggagat
gaggtcttcatgacgcacaacactgtcaaacaaaacgagcagtgcttgtccaactttgaa
ctgtcagagtaccagcaggtctttggtgacctggccattcaaatctactgtcagctcatc
aagagcatggagaacgtcatgcagcccctgatagtggcgagcatgctggagcacgagacg
attcagggagtcctggggtccaaaccgacaggcctgaggaagaggagcacgagtttccca
gaggaggaggcggtcaccgtggaagtcctcctgcagcgtcttggcgtcttccacaccacc
atgagtcagcatgggatggacccagacctcatcaaacaggtggtgaagcagcagttctac
atcatctgcgcagtcaccctcaaccacctgctgctgcggaaggacatgtgctcctggagt
aaaggcctgcagatcaggtacaatatttggcagctggaggagtggctggcggagagggat
ctggcagactgtggtgccaaggagactctggagccgctggtacaggccgcacagcttctg
cagatcaagaagaagacggaggcagatgcccaagctatctgcagcatgtgcaccgccctc
accacggcacagattctaaaagtgttgaccctgtacactccagtgattgaatttgaagag
cgagtgcccaccgctttcatcacaactattaaaaacattttgaaagacagaggcgagtca
gccactttgatgatggacggcaagaagatcttctccgtcacgctccccttcacaccctcc
actgtggctctggagaccatccaggttcctgctagtcttaatctgagcttcctcacccgc
atctaa
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integrated database retrieval system
