Hippoglossus stenolepis (Pacific halibut): 118109478
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Entry
118109478 CDS
T08308
Symbol
fancf
Name
(RefSeq) Fanconi anemia group F protein
KO
K10893
fanconi anemia group F protein
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
118109478 (fancf)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hsp03400
]
118109478 (fancf)
DNA repair and recombination proteins [BR:
hsp03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
FA core complex
118109478 (fancf)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FANCF
Motif
Other DBs
NCBI-GeneID:
118109478
NCBI-ProteinID:
XP_035012518
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Position
5:13369637..13371733
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AA seq
339 aa
AA seq
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MESALRNLSSSVELLAVAAHSGAVAQWDDHSLSTAFDWARYCEHLFSRFHNNPAVRGAME
EQLQLTNGRLRAAFPGYTEVSFSDLSRCQHHLLIGLLNNPKLPISIVKLLFDSNTPADSV
HSGCGDVSGLCSRIIRCKSACKVLSPLTPPSAVGADAEVQGGLLMERLGALITHGGAEHF
LDSVLRGCEGAAAEHFCLVIAAALLTTTNSETASQDVLLDWLRKKQPSTLQRTCSALPTA
LLMDLVKEHLKFRDAYCDVLKKWASDMEYSISDGEWVQSRTNPPVSFQKLAEHFQALFET
CPSLGDDVEKELNALKISDGDFDVRGLSVWGDLLSELHK
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
atggagtcggctctgaggaacctgtcgagctccgtggagctgctggcggtggcggcgcac
agcggtgcggtggcacagtgggatgaccacagcctgtccaccgcgtttgactgggcccgg
tactgcgaacacctcttctccaggtttcacaacaaccccgcggtcagaggagccatggag
gagcagctccagctcacgaatggacgcctgagagctgcgttccccggatacaccgaggtg
tccttctccgacctgtcccggtgccagcaccacctgctcatcgggctgctgaacaacccc
aagctgcccatctccatcgtgaagctgctctttgacagtaacactcctgcagacagcgtg
cacagtggctgtggggatgtgtccggcctctgcagccgcatcatccggtgcaagtctgcg
tgtaaagtcctgagtcctctcactcccccctcagctgtgggtgctgatgctgaggtgcag
ggggggctgctgatggagaggctgggtgctctgatcacacatggcggagcagagcacttt
ttagactcagtcctccggggatgtgaaggagcagcagcagaacacttctgtctggtcatc
gctgcagctctgctgacaacgacaaactcagaaactgcctcacaggacgttctcctggac
tggctacggaaaaaacaacccagcacgctacagcgcacgtgttccgctctgcccaccgca
cttctcatggacctggtcaaagaacacctgaaatttagggacgcatactgtgatgtgcta
aaaaagtgggcctctgatatggagtacagcataagtgatggtgaatgggttcagagcaga
acaaaccccccagtgtcctttcagaaactggccgagcactttcaggccttgtttgagacg
tgtccctctctgggggacgatgtagagaaagagttaaatgctttgaagatttctgatgga
gacttcgatgtcagaggtctgagtgtgtggggagacctgctgtcagagttacacaagtga
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