Hippoglossus stenolepis (Pacific halibut): 118109498
Help
Entry
118109498 CDS
T08308
Symbol
herc5.1
Name
(RefSeq) probable E3 ubiquitin-protein ligase HERC4
KO
K10614
E3 ubiquitin-protein ligase HERC3 [EC:
2.3.2.26
]
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
118109498 (herc5.1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
hsp04121
]
118109498 (herc5.1)
Enzymes [BR:
hsp01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
118109498 (herc5.1)
Ubiquitin system [BR:
hsp04121
]
Ubiquitin ligases (E3)
HECT type E3
118109498 (herc5.1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
RCC1
RCC1_2
Motif
Other DBs
NCBI-GeneID:
118109498
NCBI-ProteinID:
XP_047196022
LinkDB
All DBs
Position
5:complement(29138410..29148320)
Genome browser
AA seq
1007 aa
AA seq
DB search
MFSWGEDCHQVFWSKHSPVDRAAEARVHQFNPGYRIRDLSAGHSVLSFIKTNGNAFIIRT
NETKDGRRVRGKQKFVECREKIRAVSCTDDVVSLLSDTGSVLCVDTTRPPFTPRPMKELC
NIPVCQVACGSQHSVALTNDGRVYTWGQDSRGQLGLGQGKPFANSPQQLRSLSSTPLVHV
AAGGEQSFALSVSGGVFGWGRNDRGQLGLGDTTDRRTPAPVKGLNMKGTIHISCGKDHTA
TLTKDGAVFTFGSGQFGQLGHNSFTDQLRPRLVAELLGAKVTEIACGLHHTLVSTDAKKV
YSFGCGEQGQLGHGGESHPSVPLPVQLPQGSSDGPNIRNIFAGGNCSFATCSSNEEAHEE
PNTDGVSNASQYRLDDMIDKWTSKCDSKTWKMIKQEIHRTFSTASRMNQSFLEKRKEEHF
QTSSKYHGVNLSLARVAFKKLVKKDDALAEVAAAVLKLLPSFTDPVGVEGLRIFLLLNDL
LHVIQKLHRPQSTELAQAVAAAVLKLSAENLQVIGNWWTTLSASKISAYVMVWKKALSDM
LSSSPDPPRSGFRNLLQVLQYMYNANSRTAESQRLPDSDFYLLMDQNFLCEDLRQWILQT
KRKMVGAEPLILGRFPIVMDLQSKKMILDVYAATTKWLSVSRIGWNFFWKYGPDCPFAQD
PLFRLKLRRASISEDTFEQLDAVHHKDYKKRLVVFFDENSEQDNVNIKDFFHEVFHELVS
DESGMFTFNDSKTLAWFPSNATHDHHRYFLFGVLCGLALYNQCLIHLPFSMALFKKLLGV
KPSLEDIMEFSPDVGKSLLSILEEYGDEDLESLGQEFSICWDGTEVDLDPTNPEKNVTSQ
NKKEFVDAYVNHAFNTSVESVFLEFKQGFYTVFDRNLLKVLRPKELQEVLQGKDFCDWET
LKQNTVYGRPYHVDHPNMQMFWEVFDELTEDQKKKLLWFVTGFERLPILGNESITIRLKQ
VSDISEDQIYPEALTCYSFLDLPLYSTKEIMKTKLTEALSNSRRSYK
NT seq
3024 nt
NT seq
+upstream
nt +downstream
nt
atgttttcctggggagaggactgtcaccaggtcttctggtccaaacactcacctgtggac
agggcagcagaggccagggttcatcagtttaacccgggttatcgcatccgggacctgtct
gcaggacacagtgtgctcagcttcatcaagaccaacggaaatgcttttatcatccggaca
aacgagaccaaggatggaagaagagtcagaggaaaacagaagttcgtggagtgcagagag
aagatccgggctgtgagctgcactgatgatgtggtgtcactgctgtcggacacaggctca
gttctctgtgtggacacaacgcgcccccccttcacaccaaggccgatgaaggagttgtgt
aacataccagtttgtcaggtggcgtgtgggagtcaacattcagtcgccttgaccaacgat
ggccgggtgtacacgtggggtcaggattccaggggccagctgggtctggggcaggggaag
cccttcgccaactcaccccaacagctccgctctctgtcgtcgaccccgctggttcacgtc
gccgcggggggggagcagagcttcgccctctctgtcagtggaggtgtgttcggctggggc
agaaacgaccgtgggcagctcgggctgggagacacaacagacagacgtacaccagctcct
gttaaaggtctgaacatgaagggaactattcacatttcctgtgggaaggatcacactgct
actttaactaaggatggtgctgtgtttacgttcggctcggggcagttcgggcagctcggg
cacaactcattcactgatcagctccgtcctcgtctggttgccgagctgttgggggcaaag
gtcaccgagatcgcctgtggactacaccacacattagtgtcgacagacgccaagaaggtt
tactcctttgggtgtggagagcaagggcagctgggacacggaggcgagagtcatccgtct
gtgccgctccccgttcaactgccacaaggcagcagtgacgggcccaatattagaaacatc
ttcgcaggaggaaactgttcgtttgcgacatgctcgtctaatgaggaagctcatgaggag
ccaaacactgacggggtcagtaatgcgtcacagtatcgtcttgatgacatgatcgacaaa
tggacgtctaaatgtgattcaaaaacctggaaaatgatcaaacaggaaatccacaggact
ttttccacagcatctcgtatgaatcaaagtttccttgagaaaagaaaagaagaacatttc
cagacctcctcaaagtaccacggcgtgaacttgtcgcttgcacgagtcgctttcaagaaa
ctggtgaagaaggatgatgctttggcagaggtggcggctgctgtcctgaagctgcttccc
tctttcacggatccagtgggagtggaggggttgaggatcttcttgcttctcaatgatctt
cttcacgtgatccagaagctccatcgaccacagagcaccgagctcgctcaggccgtcgct
gctgccgttctgaagctgtctgctgagaaccttcaggtcataggaaactggtggacgaca
ctgtcagcctccaaaatatctgcatatgttatggtttggaagaaagccctctcagacatg
ctgtcctcaagccctgatcctccccgctccggattcagaaatctgttacaagtcctccag
tacatgtacaatgccaacagcaggactgcagagtctcaaaggctgccagacagcgacttt
tatttgctcatggaccaaaactttctttgtgaggatctgcgtcaatggattttacagacg
aaacgcaagatggtgggtgctgagcctcttatcctcggtagatttccaattgtgatggat
ctgcaatcaaagaaaatgattcttgacgtgtatgctgcaaccaccaagtggctatcagtc
agtcggatcgggtggaatttcttctggaaatatggaccagattgtccgtttgctcaagac
ccgctttttagactgaagctgagacgagcatccatttcagaagacacttttgaacaactg
gatgccgttcatcacaaggactataaaaaaagacttgtggtcttttttgatgagaactct
gagcaagacaatgtcaacatcaaagacttttttcatgaagtctttcacgagctggtgtcc
gacgaatcggggatgttcactttcaatgactccaaaacacttgcatggttcccttccaac
gcaacacacgaccaccacaggtactttctgttcggagttctgtgtggcttggccttgtac
aaccagtgcctcatacacctaccgttctcgatggctctgttcaagaagctgctcggtgtg
aagccttcgctggaggacataatggaattcagtccggacgttggaaagagtctgctgtcc
atccttgaagaatatggggacgaagacttggaaagcctgggccaggaattttcaatctgc
tgggatgggacagaagttgaccttgatcccacaaaccctgaaaaaaacgtgacaagtcaa
aacaagaaggagtttgtggacgcctacgtgaatcacgccttcaacacatctgtggagagt
gtgtttctggagttcaagcaaggcttctacacggttttcgaccggaacttgttgaaggtg
ttgcggccaaaggagctgcaggaagtcctgcagggcaaagacttctgtgactgggaaacg
ctgaaacagaacacagtttacggaaggccgtaccatgttgaccaccccaacatgcagatg
ttttgggaggtttttgatgaactaaccgaggatcagaagaagaagttactttggtttgtg
accggttttgaaaggttgcctattcttggcaatgaaagcatcacgatcaggctcaagcaa
gtctccgacatctctgaggaccagatctaccctgaagcactcacgtgttactcttttctg
gatctgcccctatactcaaccaaggagattatgaaaaccaagctgacagaggccctgagc
aacagtagaagaagctacaagtga
DBGET
integrated database retrieval system
