Hippoglossus stenolepis (Pacific halibut): 118109654
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Entry
118109654 CDS
T08308
Symbol
neil1
Name
(RefSeq) endonuclease 8-like 1
KO
K10567
endonuclease VIII-like 1 [EC:3.2.2.-
4.2.99.18
]
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
118109654 (neil1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hsp03400
]
118109654 (neil1)
Enzymes [BR:
hsp01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
118109654 (neil1)
DNA repair and recombination proteins [BR:
hsp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
118109654 (neil1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Neil1-DNA_bind
Fapy_DNA_glyco
H2TH
Motif
Other DBs
NCBI-GeneID:
118109654
NCBI-ProteinID:
XP_035012832
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All DBs
Position
5:14636952..14642008
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AA seq
416 aa
AA seq
DB search
MPEGPELHLASLYVNKMCNGVVFTGAVRKSEVSKSPEVPFTCEAYHITAASRGKEVKLTL
TPVKSDHPKQGVQTEQADQPMDIVFRFGMSGYFRFTTDDELPKHSHLRFYSKETPCRVLS
FVDTRRFGSWQPNGTWQPDRGPCIMFEYKSFRENVVSHLSDRAFDRPICEALLNQKFFNG
IGNYLRAEILFRLNIPPFVPARTVLEGLESEDLCDSGDCVKNENTKKSPDRAKTRVVKEE
EAADLLRLCHTVPLEVVNQGGKGYDPEKADYSDFKAWLQCYYVDGMTSIRDHNGRTMWFK
GDPGPMAPKDSKSPKAKKRVKKEDDHDYTQKKKVAKSRSELTAKKIAVKQETATKTPKKE
KDARPQEARRKKAKTRSVNTAQREESENARRRKSSPAETTAGSQRWSSRVTRQNSK
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atgcccgagggaccggagctccacctcgccagcctctatgtgaacaaaatgtgtaatggg
gtggtgtttactggagcggtccgaaaatctgaagtcagcaagagccctgaggtgcccttc
acctgcgaggcctaccacatcacagctgcttccagagggaaggaagtgaagctcacgctg
acgccagtaaagagcgatcatcccaaacagggagtgcagacagaacaggccgaccagccc
atggacatcgtctttcgctttgggatgtcgggctatttccgcttcaccacagacgatgag
ttacccaaacactcccacttgcggttttattccaaagagacgccgtgcagagtgctgagc
ttcgtggacacacgcaggtttggcagctggcagcccaatgggacttggcagcctgacaga
ggaccatgcatcatgtttgagtacaaaagcttcagggagaatgttgtgtcgcatctgtct
gaccgggccttcgataggcccatctgtgaagccctgctcaatcagaagttcttcaacggc
atcgggaactatctgagggctgaaatccttttcaggttgaacattcctcccttcgtaccc
gcccggactgtattggaaggccttgagtcagaagatttatgcgacagtggtgactgtgtg
aaaaatgagaatacaaagaagagcccagacagagcaaaaacaagggtggtgaaggaggag
gaggcggcggacctgctcagactgtgtcatacagtccctctggaggtggtgaaccaaggg
ggaaaaggctatgatcctgagaaagcggactactctgactttaaggcatggctgcagtgt
tactacgttgatggaatgacctctatccgggaccacaatggcagaacgatgtggttcaaa
ggtgatccaggccccatggctcctaaagattcaaagtcacccaaggcaaagaagagagta
aagaaagaagacgaccacgattacacacaaaagaaaaaggtggcaaagagtcgctctgaa
ctcacagcaaagaaaatagcggtgaaacaggaaactgctaccaaaacaccaaagaaagaa
aaggatgcacgtcctcaggaagccagaagaaagaaggcaaaaacacggagtgtaaacaca
gctcagcgtgaagagagcgagaatgcacgtaggcggaagagcagtcctgcagagacgact
gcaggctcgcagaggtggagcagcagagttaccagacagaacagcaaataa
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