Hippoglossus stenolepis (Pacific halibut): 118109730
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Entry
118109730 CDS
T08308
Symbol
polr3b
Name
(RefSeq) DNA-directed RNA polymerase III subunit RPC2
KO
K03021
DNA-directed RNA polymerase III subunit RPC2 [EC:
2.7.7.6
]
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp03020
RNA polymerase
hsp04623
Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
118109730 (polr3b)
09150 Organismal Systems
09151 Immune system
04623 Cytosolic DNA-sensing pathway
118109730 (polr3b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hsp03021
]
118109730 (polr3b)
Enzymes [BR:
hsp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
118109730 (polr3b)
Transcription machinery [BR:
hsp03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
118109730 (polr3b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_7
RNA_pol_Rpb2_2
RNA_pol_Rpb2_4
RNA_pol_Rpb2_3
RNA_pol_Rpb2_5
Motif
Other DBs
NCBI-GeneID:
118109730
NCBI-ProteinID:
XP_035012963
LinkDB
All DBs
Position
5:18557465..18580154
Genome browser
AA seq
1162 aa
AA seq
DB search
MLQRLPAASINRVCVSGVSVCVRGAGETNMEVLGGEFCEMTPQELAAPVNTVEEKWKLLP
AFLKVKGLVKQHIDSFNYFINVEIKKIMKANEKITSDADPMWYLKYLNIYVGMPDVEESF
NVTRPVSPHECRLRDMTYSAPITVDIEYTRGSQRIIRNALPIGRMPIMLRSSNCVLTGKT
PLEYAKLNECPLDPGGYFIVKGQEKVILIQEQLSKNRIIVDQDRKGTVGASVTSSTHEKK
SRTNMIVKQGRFYLRHNTLSEDAPIAIIFKGMGVESDQEIVQMIGTEEHVMASFAPSLEE
CQKAQIFTQTQALRYLGNKVRRQRMWGGPKKTKMEEARELLASLILTHVPVKEFNFRAKC
IYLAVMVRRVILAQGNKNKVDDRDYYGNKRLELAGQLLSLLFEDLFKKFNSELKKIADQI
IPKQRAAQFDVVKHMRQDQITNGMVNAISTGNWSLKRFKMDRQGVTQVLSRLSFISALGM
MTRISSQFEKTRKVSGPRSLQPSQWGMLCPSDTPEGEACGLVKNLALMTHITTDMEDGPI
VKLAFNLGVEDVNLLCGEELSYPSVFLVFLNGNILGVIRDHHKLVNTFRLMRRAGFINEF
VSISTNLTDRCVYISSDGGRLCRPYIIVKRGQPMVKNKHIEDLSQGYRTFEDFLHEGLVE
YLDVNEENDCQIALYEYMICKVTTHLEIEPFTLLGVCAGLIPYPHHNQSPRNTYQCAMGK
QAMGTIGYNQRNRIDTLMYLLAYPQKPMVKTKTIELIDFEKLPAGQNATVAVMSYSGYDI
EDALILNKASLDRGFGRCLVYKNAKCTLRRYTNQTFDKVMGPMLDAATRKPIWRHNILDA
DGICSPGEKVENKQVLVNKSMPTVTQAPLEGSTQPGQPQYRDVPVGYKGSTDSYIEKVMI
SSNAEDAFLIKILLRQTRRPEIGDKFSSRHGQKGVCGLIVPQEDMPFCDTGICPDIIMNP
HGYPSRMTVGKLIELLAGKAGVLDGRFHYGTAFGGSKVKDVCEDLIRYGYNYQGKDYVTS
GITGEPLEAYIYYGPVYYQKLKHMVIDKMHARARGPRAVLTRQPTEGRSRDGGLRLGEME
RDCLIGYGASMLLLERLMISSDAFEVDVCGQCGLLGYSGWCHYCKSSCHVSSLRIPYACK
LLFQEMQSMNIIPRLKLARYNE
NT seq
3489 nt
NT seq
+upstream
nt +downstream
nt
atgctgcagcgacttccggcagcgtccatcaacagagtgtgtgtgagcggagtttctgtg
tgtgtccggggagcaggagaaaccaacatggaggtgttaggaggagagttctgtgagatg
actcctcaggagctggcggctcctgtcaacacggtggaggaaaagtggaaactattacca
gccttcctgaaggtgaaaggtctggtgaagcagcacattgactcattcaactatttcatc
aatgtggagatcaagaaaataatgaaagcaaatgagaaaatcacaagtgatgctgatccg
atgtggtacctgaaatacctcaatatctatgtggggatgcctgatgtagaggaaagcttc
aacgtaactcgaccagtgtcacctcatgagtgtcgtctcagggacatgacgtactccgct
cccatcacagtggacatagagtacacccgtggcagtcagagaatcatccgcaatgccctg
cccatcggaagaatgccgatcatgctgcggagctccaactgtgttctcacaggaaagacg
cccttggagtatgcaaaactcaacgaatgtcctctggatccaggaggttatttcattgta
aaaggtcaagagaaggtcattctgattcaggagcagctgtcgaagaatcgaatcattgtg
gatcaggacaggaagggaacagtcggagcttcagtcaccagttccactcatgagaagaaa
agcagaacgaatatgatcgttaaacaaggacggttctacctgagacacaacacgctgtca
gaggacgctcccatcgccatcatattcaagggtatgggtgtggagagcgaccaggagata
gtgcagatgatcggcacagaggagcacgtcatggccagcttcgccccgagtctggaggag
tgtcagaaagctcagatcttcacgcagacgcaggctctgaggtacctcgggaataaagtg
cggagacagcgaatgtggggaggccccaagaaaaccaagatggaggaggccagagagctt
cttgcatctcttatcctcacacatgtgcccgtcaaagagtttaactttcgggctaagtgt
atttacctggctgtgatggtgaggagagtgattctggcccagggcaacaagaacaaggtg
gacgacagagattactatggcaacaaacgtcttgagttggcgggacagctgctgtctctg
ctgtttgaagatctctttaagaagttcaactccgagctgaagaaaatcgctgaccagatc
attcccaagcagagagcagctcagtttgacgtggtgaagcacatgcggcaggaccagatc
accaacggcatggtcaatgccatatccacgggaaactggtccctgaagagattcaagatg
gaccgtcagggcgttactcaggtcctgtctcgtctctccttcatctcagctctgggcatg
atgaccaggatctcctcccagtttgagaagaccaggaaggtcagcggcccgcgctccctg
cagccgtcacagtggggcatgctgtgtccgtctgacacgcctgagggagaggcctgtggt
ctggtgaagaacttggctctgatgacccacatcaccacggacatggaggacggcccgatc
gtcaaactggccttcaacctgggggtggaggacgtcaacctgctgtgcggcgaggagctc
tcctacccgagcgtcttcctcgtcttcctcaacggtaacattctgggtgtcatcagagac
catcataagctggtcaacaccttcaggctgatgcgtagagcaggttttatcaacgagttt
gtgtccatctccaccaacttgaccgaccgctgcgtctacatctcgtctgacggaggacgc
ctctgcaggccgtacatcatagtgaagagggggcagccgatggtgaaaaacaaacacatt
gaagacctgtcgcagggctacagaacctttgaggatttcctgcacgagggtcttgtggag
tatctggatgtgaacgaggagaacgactgtcagatcgccctttatgaatacatgatctgc
aaagtcacaacacacttggagatcgagcccttcacgttgctcggggtgtgcgccggcctc
attccctacccccaccacaaccagtcacccaggaacacgtaccagtgcgctatgggcaaa
caggcaatgggcactattggctataatcagaggaaccgaatcgacactctgatgtacttg
ctggcgtatcctcagaaaccgatggtcaaaacaaaaaccattgagctcatcgactttgag
aagcttcctgctggtcagaacgccaccgtggctgtgatgagctacagcggctacgacatt
gaagacgctctgatcctgaacaaagcttcactcgacagagggtttggccgctgcctcgtc
tataaaaatgccaagtgtacgctgcggcgttacaccaaccagacctttgacaaggtgatg
ggccccatgctggatgctgccacacgaaagcccatctggaggcacaacatcctggatgct
gatggcatctgctcccctggtgagaaagtggagaacaagcaggtgttggtaaacaagtca
atgccaactgtcactcaggcaccactggagggcagtacccagccaggccagccccagtac
agagacgtgcccgtcggctataagggctcaacagactcgtacatcgagaaggtcatgatc
tcgtccaacgccgaagatgctttcctcatcaagatcctgctgaggcaaaccaggagaccg
gagataggagacaaattcagcagtcgtcacggacagaaaggtgtttgcggtctcatcgtc
ccacaggaggacatgccattctgtgacacgggcatctgtccagatatcatcatgaaccct
catgggtatccctccaggatgacggtggggaagttgatcgaactgttggctgggaaagcc
ggagtcttagacggacgcttccactacggcacggccttcggcggcagcaaggtgaaggat
gtgtgtgaggatctcatccgttacggatacaactaccagggcaaagactacgtcacctca
ggaatcactggagaaccactggaggcatacatctactatggaccggtgtattatcagaaa
ctgaagcacatggtcatagacaagatgcatgccagagcccgaggccccagagccgtcctc
accaggcagccgacagagggccgctccagggacggaggtctgcgtctgggcgagatggag
cgcgattgtttgatcggctacggagcgagcatgttactgctggagcggctcatgatctcc
agtgacgccttcgaggtggatgtgtgcggacagtgcggcctgctgggatactctgggtgg
tgtcactactgtaagtcgtcctgccacgtttcctccctgcggatcccgtacgcctgcaag
ctgctcttccaggagatgcagtccatgaacatcatccctcgactcaaactggcccgttac
aacgagtga
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