Hippoglossus stenolepis (Pacific halibut): 118109801
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Entry
118109801 CDS
T08308
Name
(RefSeq) cadherin-related family member 5
KO
K16505
cadherin-related family member 5
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
hsp04515
]
118109801
Cell adhesion molecules [BR:
hsp04515
]
Cadherins
Cadherin related
118109801
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Gene cluster
GFIT
Motif
Pfam:
Cadherin
Motif
Other DBs
NCBI-GeneID:
118109801
NCBI-ProteinID:
XP_035013083
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Position
5:17177178..17185266
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AA seq
885 aa
AA seq
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MDLPELKLTSFPAKAPVWSLLVLLCLHTVKGMSGWGGCLDGHDVFVTVRENSRPGEVVAE
LSADTTMEGVQWTLDGKDADWFFLDERYIRLNTSVDKALDREAQSPVLMAELQCYEDDLL
QSVYRVMVEILNENDNSPVFAENSTHSLIISELTPVDTVIFTVLATDADNDKIIYYIDQT
SPDADYFKVDFPNSGEVILSKPLDYETQPVLTVTIHASEMSTAERFNTSANITIHVLDGD
DQYPQFLPCTLLFQDETSHICTSPVYTVNITEGEEDIVLEFSPGPIYAVDGDRGLSTPLS
YAILSGNDDGRVLIDRVTGEMKLTQGVTDRLTTPMLHLQVLAYQDDDPRKYSVATALIRI
LAVNHFHPVFDEAEYHGFVTAVKSAASLVNTYGGKVLMLHVQDQDFEQGFNPRISFTFSH
TSNHTDIYQLTQEGLVIARTNQLKPKQRHTLEVKATDKESGDATFTTVVIEVLTEGQSIP
HSPLGEERLTGCTVGKAFFLSLVFMTTGGCVLSLVMWLKRKQKGKRDPLERGCVAQGKHP
NVSLRWFNLVSHRSAMPHTEEVPNNREEYGTCNPSFSFPDKPAIYTVPDLPNCRGPAAPG
ATAAPDSSVPPPENTCIPVISNKNASLLTKSSPSSPTFHPATVDLRPTHTAQDAVPSKEN
LNSPPATPLEPPSELPNTSLSPTTPYSRPDSQTTTNDDIIDLVTSPSSQSSAPCSQTRIA
YAEIDKPFRKSRVKTPPYSPLLSLSLSKQTSTPPPTPEQEPFKAKLVHVDTSPLDTPPVT
PQQKSMTLSMEEDQPSTSLDQVDQPEQPGADTSSPSEDRRPSEDRRPSENSANTQDDRRA
GEEDDDGFLGDEDGDKQSDDELESDEEELLRVMARCNPVFITFSK
NT seq
2658 nt
NT seq
+upstream
nt +downstream
nt
atggacctccctgaactcaaactgacttcatttccggccaaggctccagtctggtcgctg
ctggtccttctatgtctgcacacagtcaaagggatgtcagggtggggcgggtgtttggat
ggacatgatgtatttgtgacggtcagagaaaacagccgcccaggagaagttgtcgctgag
ctctcggctgacaccacaatggaaggggtacagtggaccctggatggaaaagacgctgat
tggttcttcctggatgaaagatacatccggttgaacacatcggtcgacaaggctcttgac
cgggaggcccagagtcccgtcctgatggctgagttgcaatgttatgaggacgatcttctt
cagagtgtgtacagggtcatggtggagattcttaatgagaatgataactcgcctgtgttt
gcagaaaactccacccactctcttattataagtgagctgactccagtggacactgtgatc
tttaccgtcctggccacagacgcagataacgacaagatcatttactacattgaccagaca
tcacctgatgcagattatttcaaggttgatttcccaaacagtggagaagtgatcctgtcc
aagcctctagactacgagactcaacccgtgctgactgttaccatccacgcctcggaaatg
agcaccgctgagcgcttcaacaccagcgccaacattaccatccacgtcctggatggagac
gaccagtacccacagttcctgccctgcacgctgctgttccaagatgagaccagtcacatc
tgcaccagtcctgtgtacacagtcaatatcacggagggggaggaggacattgtgctggaa
ttctctcctggtcctatatatgcagtggatggagacagaggcctcagcactccactcagt
tatgccatactctcaggcaacgatgacggccgtgtcctgatcgatagagtgacaggggag
atgaaactgactcagggggtgactgacagactcacaactccaatgctgcatctacaggtc
ctggcataccaggacgatgaccccaggaagtactctgtcgccacagcgttgatccgaatc
ctggcagtgaaccactttcacccagtgtttgacgaggctgaatatcacggctttgtaact
gcggtaaagagcgctgcctcactggtgaacacgtatggtggcaaagtgctgatgttacac
gtacaagaccaggactttgagcagggtttcaaccccaggatcagcttcaccttcagccat
acatccaaccacacagacatctaccagctcacacaggagggccttgtgatcgccaggacc
aaccagctcaaaccaaaacagagacacaccctagaggtaaaagccacagacaaagagtca
ggtgatgccacctttactactgtcgtgatcgaggtgttgactgaaggacaatcaattcct
cacagtccactgggagaggagcgcctgacgggctgtactgtgggcaaagcattcttcctg
agcctggtgttcatgactacgggtggatgtgtcctgtctctggtgatgtggttgaagaga
aaacaaaagggaaagagggacccactggagagaggctgtgtggcccagggaaaacacccc
aatgtgagcttgcggtggttcaatctggtgagtcaccgcagtgccatgccacacacggag
gaagttcccaacaacagggaagaatatggaacctgcaatccttccttcagcttccctgac
aaacctgcgatctataccgtcccagatctccccaactgccgaggacctgctgcaccagga
gcgactgctgcacccgacagcagcgtccccccccctgagaacacgtgcatccctgtgatc
tccaataaaaatgcttctttactaaccaaaagctcccctagttcacccacctttcaccca
gccactgtggatttgaggcctacacacacggctcaagatgctgtgccatccaaagaaaat
cttaactccccacctgctacacccctggaacctccttcagaactacccaacaccagtctg
agccccacaacaccttattcccgtcccgactcacaaactaccaccaatgatgacatcatt
gaccttgtcacaagcccctcctctcaatccagcgctccatgcagtcaaacccgcattgct
tatgcagaaatagacaaaccattccgcaaatctcgcgtgaagacgcccccgtattcacct
ttactgtccttatccctgtccaagcagacaagcacgcccccacccaccccagagcaggaa
cctttcaaagccaagctggtccacgtggatacttcaccgcttgatacacctccggtgacg
ccacagcagaaatctatgactctaagcatggaggaagaccaaccgtccacatcgctggac
caggtagaccaaccagagcagccaggtgcagataccagcagtccatctgaggacagaagg
ccttctgaggacagaaggccctcagagaactcagcaaacacccaggacgaccgcagggcg
ggggaggaggatgacgacggctttctgggagatgaagatggagacaagcaaagtgacgat
gagttggagtcagatgaagaagagctgctgagagtgatggctcgatgtaaccctgttttt
atcacctttagtaagtga
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