Hippoglossus stenolepis (Pacific halibut): 118109814
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Entry
118109814 CDS
T08308
Symbol
irx5b
Name
(RefSeq) iroquois-class homeodomain protein IRX-5b
KO
K24889
iroquois-class homeodomain protein IRX
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hsp03000
]
118109814 (irx5b)
Transcription factors [BR:
hsp03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
118109814 (irx5b)
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Gene cluster
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
DUF7365
Peptidase_C37
Motif
Other DBs
NCBI-GeneID:
118109814
NCBI-ProteinID:
XP_035013104
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Position
5:28716355..28720309
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AA seq
419 aa
AA seq
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MSYPRAFLLQPSVSVSLPPAPSFSSGLLLAPRTEELTRSSSGSAFAPYPGSATSPGFNLH
LRYGGGRGAGAGGRGAGGGGGEPRAAETLSAFMSPGFDPSSGISPSLDYHPFGALGPFPY
CDPAYRKNATRDATATLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRL
KKENKMTWTSRNRSEDEEEEDNIELERNDEDEETQKTKSEAAGGRPSSVLDSTDLMFRDG
RSSDVDLDFKESGDRRPHIPGPTHTGTPPQNSPLGTQSVSELERTSSSPTQKHRDSFATI
QGPNPAPKPKLWSLAEIATSSDKTKGSNESSQSGGGGHTRQPLYPHSPSLPQHLYYTSPF
IPAYSHYGPLGPLHSSLGSRSASATHLNGLELQRAEGAATDGKLSQLQLHELRRAPTNM
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtaccctcgggcttttctcctccagccctccgtgtctgtgtctcttcctccggct
ccgtccttcagctccggcctcctcttggcaccgaggaccgaggagctgactcgctcctct
tcgggctccgccttcgctccgtacccgggatcagcgacttctcccggcttcaacctgcac
ctccggtacggaggaggaagaggagcaggagcaggaggaagaggagccggaggaggagga
ggagagccgcgggccgccgagaccctcagcgcgttcatgagtccagggttcgacccgtcc
tcagggatctccccctccttagactaccacccattcggggccctggggcccttcccgtac
tgtgaccccgcctacaggaagaacgccacgcgggacgccacggccacgctgaaggcctgg
ctgaacgagcacaggaagaacccgtaccccaccaagggcgagaagatcatgcttgccatc
atcaccaagatgaccctgactcaggtgtccacctggttcgccaatgcccggcggcggctg
aagaaggagaacaagatgacatggacgtcccggaaccggagcgaggacgaggaggaggag
gacaacatcgagctggagcggaacgatgaagacgaggaaacgcagaagacgaagagcgag
gcagctgggggccgtccctcctcggttctggactccactgatctgatgttcagagacgga
agaagcagtgacgttgatctggactttaaagagtcgggggacaggaggccccacatcccc
ggtcccacccacacagggacccctcctcagaactcgccactcgggacgcagagcgtgtcg
gagctggagcgcacgtcgagctcgccgacgcagaagcacagagactccttcgccaccatc
caggggccaaacccggcccctaaacccaaactgtggtcgctggctgagatcgccacgtcg
tcggacaaaacaaaaggatctaatgaatcgtctcagagcggggggggcggccacacgcga
cagcccctgtacccccacagcccctccctgccccaacacctctactacacctcccccttc
atcccagcatactctcactatggccccctggggcccctgcacagcagccttggctcacgc
tcggcctctgcgacgcatctaaacggattagagctgcagcgagccgagggcgccgccaca
gacggtaaactcagtcagctgcagctgcacgaactcaggagggccccaacgaacatgtag
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