Hippoglossus stenolepis (Pacific halibut): 118109845
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Entry
118109845 CDS
T08308
Symbol
siah1
Name
(RefSeq) E3 ubiquitin-protein ligase Siah1 isoform X1
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp04115
p53 signaling pathway
hsp04120
Ubiquitin mediated proteolysis
hsp04137
Mitophagy - animal
hsp04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
118109845 (siah1)
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
118109845 (siah1)
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
118109845 (siah1)
09143 Cell growth and death
04115 p53 signaling pathway
118109845 (siah1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
hsp04121
]
118109845 (siah1)
Enzymes [BR:
hsp01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
118109845 (siah1)
Ubiquitin system [BR:
hsp04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
118109845 (siah1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sina_TRAF
Sina_ZnF
Sina_RING
Trm112p
Alpha_Helical
Motif
Other DBs
NCBI-GeneID:
118109845
NCBI-ProteinID:
XP_035013158
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All DBs
Position
5:25099073..25120717
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AA seq
342 aa
AA seq
DB search
MSQVQVNVKPASVAQQAPPWNSLFRLLFSCMATRSVHRTKEVPTFQEKTKALLGNLMDEE
MSRQTATALPTGTSKCPPSQRVPTLSGTTASNSDLASLFECPVCFDYVLPPILQCQSGHL
VCSNCRPKLTCCPTCRGPLGSIRNLAMEKVANSVLFPCKYASSGCEVTLPHTDKTEHEEL
CEFRPYSCPCPGASCKWQGSLDAVMPHLMHQHKSITTLQGEDIVFLATDINLPGAVDWVM
MQSCFGFHFMLVLEKQEKYDGHQQFFAIVQLIGTRKQAENFAYRLELNGHRRRLTWEATP
RSIHEGIATAIMNSDCLVFDTSIAQLFAENGNLGINVTISMC
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atgtctcaggtccaagtgaatgtgaagccagctagcgtagcacagcaagctccaccctgg
aactccttgttccgactcctcttctcatgcatggccacaaggagcgtgcacaggactaaa
gaggtccccacatttcaagagaagacgaaagccttacttggaaatcttatggacgaagaa
atgagtcgccagactgccaccgcgctgcccacaggaacctccaagtgccccccctcccag
cgcgtgcccaccctgtcgggcaccacagcctccaacagtgacctggccagtctgttcgag
tgccctgtctgcttcgactatgtcttaccccccatcctgcagtgtcagtccgggcacctg
gtatgttccaactgccggcccaagctcacctgctgcccgacctgccgaggtcccctgggc
tccatcaggaacctggccatggagaaggtggccaactcggtcctcttcccctgcaagtac
gcctcgtcgggctgcgaagtcaccctgccccacaccgacaagacggagcacgaagagctg
tgcgagttccggccgtactcctgcccctgccccggcgcctcctgcaagtggcagggctcc
ctggacgccgtcatgcctcatctgatgcaccagcacaagtccatcaccacactgcagggg
gaggacattgtgttcctggccacggacatcaacctccctggagcggtggactgggtgatg
atgcagtcgtgcttcggcttccacttcatgctggtgctggagaagcaggagaagtacgac
ggccaccagcagttctttgccatcgtgcagctcatcggcactcgcaagcaggcggagaac
ttcgcctaccggctggagctcaacggtcaccggcgccgcctgacctgggaggccacgccg
cgctccatccacgagggcatcgccacggccatcatgaacagcgactgcctggtgttcgac
acgtccatcgcgcagcttttcgctgagaacggcaacctgggcatcaacgtcaccatctcc
atgtgctaa
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