Hippoglossus stenolepis (Pacific halibut): 118109940
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Entry
118109940 CDS
T08308
Symbol
fbxl13
Name
(RefSeq) dynein regulatory complex subunit 6
KO
K10279
dynein regulatory complex subunit 6
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
hsp04121
]
118109940 (fbxl13)
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
hsp03037
]
118109940 (fbxl13)
Ubiquitin system [BR:
hsp04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
118109940 (fbxl13)
Cilium and associated proteins [BR:
hsp03037
]
Motile cilia and associated proteins
Nexin-dynein regulatory complex
118109940 (fbxl13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_6
LRR_4
F-box-like
LRR_EndoS
LRR_Zer-1
F-box
LRR_8
LRR_RPS2
LRR_At5g56370
Dpy-30
Motif
Other DBs
NCBI-GeneID:
118109940
NCBI-ProteinID:
XP_035013314
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All DBs
Position
5:18834133..18853124
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AA seq
803 aa
AA seq
DB search
MANTQPVLEEKEMNRVLPQLSKGLLTAACLSCPSDPIEFLRNTLLALYGQEYVQDVDWYK
FVLDAKRCTPSPSLTRRSMCAAIDPEDDILFFSLLEKAYCCYRKSLTSSCFRKWKSFTVQ
SKRDAAVLALKVDVRMKHFERSCQQAAVTQWFKWVKLHKKTQAAAVEKLERLVNTRRLKR
IIAAWNNAATESRRTKEYFKRLDMGSSENGNRENQTGEECDRLSMLPYSLSLKIFQYLEL
GDRLHCAEVCCAWKTLLQSSTLWSQINVSVEKHWITDSTMKQVLQNYRPFVIYLNLRGCT
SLTWTSFRCISECKNLQELNVSDCFNVTDAMVQEIVEGCPCLLYLNLSCTLVTDNTLREL
SRNCLNLQYLSLAYCNRFTDKGFLYLTTGKGCHNLFHLNLSGCTQMTVNGFKYLSAGCPS
LREVVINDMPTLSDNCILALLARCRCLSAISLLDAHHLSDIAFKAISEAASLKSFSTEGN
SQLSDVSWKALCRGSPGLHRLHAAKSSRMTDTSLKFMATLKKLQYLDISLCNKVSDAGIK
YLTEGWSAAKLQELNVSQCSLITDISVMRIAERLCKLSHLNLSYCAKLTDASLEWLSGSS
IRSLDLRGCNIQDQGLAAMEEINLRTLVLAECVKITDNGIKTLCQNMTDLEHVDVSHCVA
LSDLAIRAFSFYCRSLFTLRMSGCPKMTDMAMQYLTGGAQYLRELDVSGCVLLTDRTQRL
IERICPPLCSIKMTCCSNISKAAALKLRPRVKHWEHSNDYSPFKTRQNTGKVRPPVTKPV
KTMDTWEVVEHSVITRLARIERI
NT seq
2412 nt
NT seq
+upstream
nt +downstream
nt
atggcgaacacacagcctgttctggaagagaaagaaatgaaccgagttctgccacaatta
tctaagggcctgctgacagctgcatgtctgtcatgtcccagtgatccaatagagtttctg
aggaacactcttctggccctctacggacaggagtatgtccaggatgtagactggtacaag
tttgttttggatgcaaaacggtgcacaccatccccctctctgactcgcaggagtatgtgc
gctgccatcgatccagaagacgacatattgttcttcagtctgctggagaaggcatactgc
tgctacaggaaaagtctaacaagctcctgcttcaggaagtggaagagtttcactgtgcag
agcaagagagatgccgcagtgctggccctgaaggttgacgtgagaatgaagcactttgag
aggagctgccagcaggctgcagtcacccaatggttcaaatgggtaaaattacacaagaag
acccaggctgctgctgttgagaaacttgagagacttgtaaacacccgtcgccttaaacgc
atcatagctgcatggaacaatgccgcaacggagtcaaggagaacaaaagaatactttaag
aggttggatatgggttcgtccgaaaacggcaacagagaaaaccagactggagaagaatgt
gaccgactctccatgctcccttacagcctctcattgaagatctttcagtatctggaattg
ggagacaggttgcattgtgctgaggtttgttgtgcatggaaaactttactccaatccagc
acactgtggagtcagatcaacgtctctgtagagaaacactggataaccgacagcacaatg
aaacaggttctgcagaactaccgaccatttgtgatctatctgaacctgcgaggctgcacg
tcactgacatggaccagcttcagatgtatcagtgaatgcaaaaatctccaggagctcaat
gtatcagactgttttaatgtcacagatgcgatggttcaggaaattgtcgagggctgcccc
tgcctgctctacctgaacctttcctgcactcttgttacagacaatactctcagagagctg
tccaggaactgtctcaaccttcagtacctgagtctcgcctattgcaacagattcacagac
aaaggatttctgtacctgaccacagggaagggctgccacaatctcttccacctcaacctg
tccggctgcactcagatgactgtgaacggattcaaatacctgtcagcaggatgcccttca
ctcagagaagttgtgatcaatgacatgcccacactgtctgataactgtatcctggcacta
cttgccagatgtcgctgtctctctgccatttctcttctggatgctcatcatctttccgac
atcgccttcaaagccatcagcgaagcagcatcgctgaagagtttcagtacagaggggaac
tcccagctctcagacgtcagctggaaggctctgtgcagaggctcgccaggcctccacaga
ctccacgccgcaaaatcttctagaatgaccgacaccagcctcaaattcatggccaccctg
aagaaactgcagtacctggacatctcactttgcaacaaggtgagtgatgctgggatcaaa
tatttgactgaaggctggtcagccgccaaattgcaggagctgaatgtcagtcaatgcagt
ctcatcaccgacatctctgtcatgaggatcgcagaaaggttgtgtaaactctcccacctc
aacttgagttactgtgcgaaactgaccgacgcaagtctggagtggctgagcggcagctcc
atccgctctcttgacctcagaggttgcaacatccaggaccaggggctggctgccatggag
gagattaacctgaggacattagtgctcgcagagtgtgtcaaaatcacagataatggcatc
aagaccctgtgccagaacatgacagatctggaacatgtagatgtgtctcactgcgtcgct
ctgtctgacctggccattagagccttttcattctactgcaggagtctgttcacactgcgg
atgtcaggctgtccaaagatgacagatatggcgatgcagtatctgacaggtggagctcag
tacctgcgagagctggatgtgagcggctgcgtgcttctcacagatcgcacgcaacgactc
atagagaggatctgtcccccgctgtgctccatcaagatgacctgctgcagcaacatctcc
aaggcggccgccttaaagctgcggcctcgtgtgaagcactgggagcacagcaatgactac
tctccattcaagacgagacaaaacacgggcaaagttcggcctccagtaacaaagcccgtc
aagactatggacacctgggaagtggtggagcactcagtgatcacgagattagcgcgtata
gagaggatataa
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