Hippoglossus stenolepis (Pacific halibut): 118109971
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Entry
118109971 CDS
T08308
Symbol
znf423
Name
(RefSeq) zinc finger protein 423 isoform X1
KO
K22870
zinc finger protein 423
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hsp03000
]
118109971 (znf423)
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
hsp03037
]
118109971 (znf423)
Transcription factors [BR:
hsp03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
118109971 (znf423)
Cilium and associated proteins [BR:
hsp03037
]
Primary cilia and associated proteins
Nephronophthisis-related proteins
118109971 (znf423)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2_4
zf-C2H2
zf-Di19
zf-C2H2_6
zf-H2C2_2
zf-C2H2_jaz
zf-C2H2_3rep
zf-C2H2_FBX41
Zap1_zf1
zf-C2H2_2
zf-met
zf-C2H2_ZNF462
zf-C2HE
zf-C2H2_9
Phage_zn_bind_3
Zf-C2H2_ZNF451_C
Zn_SUZ12
zf-C2H2_OTU1_C
Motif
Other DBs
NCBI-GeneID:
118109971
NCBI-ProteinID:
XP_035013355
LinkDB
All DBs
Position
5:24727105..24864148
Genome browser
AA seq
1446 aa
AA seq
DB search
MSRRKQAKPRSVKAVEEGESSECGGTWDESTVQTEVPASDRESEPKEGHGTGAEDGEPDD
DDLDDESIFTCDNCQQDFECLAELSDHRTNHCPADGEDDPAGLSWVPSSPSSKDVASPSQ
MPDGCCDLGMATGGEEEGGAGLPYPCQFCDKSFSRLSYLKRHEQIHSDKLPFKCTFCSRL
FKHKRSRDRHVKLHTGDKKYSCQECEAAFSRSDHLKIHLKTHSSSKPFKCSVCKRGFSST
SSLQSHMQAHRKNREHLALRSERDGGKKGGVDIDLDQDLYMCDYCEETFSQTDELEKHVL
TRHPQLSDRADLQCIHCPEIFLDEASLLTHIETQHANRKHKCPVCSEQFPSVEDVYCHLD
SHRQPDSSNHSAASPDPALGSVASMSSATPDSSASLERGSTPDSTLKPIQVSERGRRRGT
DTVEEIGISLVHQAGGGGLNWSKLTYSCPYCSKRDFHSLAVLEIHLKTIHADKPQQSHTC
QLCLDTLPTLYNLNEHVRKAHRASGGTVNTAPAAFPLLQFTNVTAFHCNYCPDMFGDINS
LQEHIRVSHCLPGGIVAGSTTLEGNHAFFCNQCSMGFLTESSLTEHIQQTHCSSALGGGG
LSGGSVAKLESPVLQSASQSFMEVYSCPYCTNSPIFGSLLKLTKHIKENHKNIPLANNKR
QAKVADLSPASSDVEISSPKRHRLGGDSTPSMGSNGDYPCNQCDLRFSSFDGFQAHLKSH
LEMLLRRQSCPQCSKEDFESQDALLQHLTVHYTTTSTQYVCESCDKQFSSVDDLQKHLLD
MHTFVLYHCTLCQEVFDSKVSIQVHLAVKHSNEKKLFRCTACAWDFRKEADLQIHVKHNH
LGQRSGLPGGLGAGLKPRKCIFCGETFGTEVELQCHITTHSKKFTCRFCGKAFHAISLLE
RHLREKHCIFEGGTITGNGGGTGSSSSQNGTPNGLAQSSKRGGAGGGGGVSGGNGGAVGV
ERGTVVAAEQADLQNMVLKSGGTTQGGDTVNSHEASGGEEELDNSEPMYACDICGAAYTM
ESLLQNHRLRDHNIRPGDDDASSRKKKADFIKGNHKCNVCSRTFFSESGLREHAQTHRGP
AKHYMCPICGERFPSLLTLTEHKVTHSKSLDTGTCRICKMPLQSEEEFIEHCQMHPDLRN
SLTGFRCVVCMQTVTSTLELKIHGTFHMQKLSSGSTLGGGGGGGNGTGGGGAGIGGNGSA
SSSPNGHLQQHKLYKCAFCLKEFKNKGELVKLDVNGLPYGLCAGCMNRGTNGQSPNQGGA
ATPGDMQGEKAMVGLRCPECGVKFETLEDLESHVQTDHPEVSPETSATGKKAEASPVPKK
KTYQCIKCQMTFETEREIQIHVANHMIEEPTCRQEEGINHECKLCNQMFDSPAKLLCHLI
EHSFEGMGGTFKCPVCFTVFVQANKLQQHIFAVHGQEDKIYDCSQCPQKFFFQTELQNHT
LSQHAQ
NT seq
4341 nt
NT seq
+upstream
nt +downstream
nt
atgtcgagacggaaacaggccaagccgcgctccgtcaaagcggtagaagaaggggagtct
tcagagtgtggaggcacctgggatgaatcaactgtccagacagaagtcccagcctctgac
cgagagtccgagcctaaggaaggccacggcacaggcgctgaagacggagaaccggacgac
gacgacctggacgacgagtccatcttcacctgtgacaactgtcagcaggacttcgagtgt
ctggccgagctcagtgaccacagaaccaaccactgcccagccgacggtgaagatgaccca
gcaggactgtcctgggtgccgtcctctccctccagcaaagacgtggcctcgccctctcag
atgcccgacggctgctgcgacctcggcatggccaccggtggcgaggaggaaggaggcgcc
ggtctgccgtacccctgccagttctgtgacaagtccttcagtcgtctgagctacctaaag
cgtcacgagcagatccacagcgacaagctgccgttcaagtgcaccttctgcagccgcctg
ttcaaacacaagaggagcagagaccgacacgtcaaactccacacaggagacaagaagtac
agttgtcaggagtgtgaagctgcgttctctcgctctgatcacctgaagatccacctcaag
acgcacagctccagcaaaccttttaagtgcagcgtgtgcaagcgcggcttctcctccacc
tcgtcgctgcagagccacatgcaggctcaccgcaagaacagagagcatcttgcactgagg
agcgagagggacggaggcaagaagggaggagtagacattgacctggaccaggacctgtat
atgtgtgattactgcgaggagacgttcagccagacggacgagctggagaaacacgtcctg
accagacacccccagctgtcggacagagccgacttgcaatgcatccactgtccggagatc
tttctcgacgaggcttctctcctcacacatattgaaacacagcatgccaaccgcaaacac
aaatgtccagtgtgttcggagcagttcccgtctgtggaggacgtctactgccacctcgac
agccatcgccagccggactcctccaatcacagcgctgccagccccgaccccgcgctgggc
agcgtggcctcaatgagctcagccactccagactccagcgccagcctggagagagggtcc
acaccggactctacgctaaaacccatccaggtcagtgagcgaggacggagaagaggcacc
gacacggtggaagagattgggataagcctggttcatcaagctggaggtggaggattgaat
tggagtaaattaacgtactcttgcccttactgctcaaaaagagacttccacagtctggcg
gtgttggagatccatttgaagaccatccatgcagataagccgcagcagagccacacgtgt
cagctctgcctggacaccctgccaacactctacaatctcaacgaacatgtgcgcaaggct
caccgggccagcggcggcaccgtcaacacagcgccggcagcttttcctctgctgcagttc
actaacgtcacagcgttccactgcaactactgtccggacatgttcggggacatcaactcc
ctgcaagagcacatccgagtgtcccactgcctgcccggtgggatcgtggcaggatccacc
actttagaagggaaccacgcgttcttctgcaaccagtgctccatgggattcctgacagag
tcgtcactgacggagcacattcagcagacgcactgctcctcagctctcgggggcggagga
ctgtctggaggatccgtggccaaactggagtctcccgttctgcagtctgcgtctcagtcc
ttcatggaggtttactcctgcccttactgcaccaattctcccatcttcggctcactcctc
aagctcaccaagcacataaaggagaaccacaagaacatcccgctcgctaacaacaagcgg
caggcgaaggtcgcggacttgagcccagcctcctcggacgtggagatctcctccccgaag
cgccacagacttgggggggactccactccctctatggggagcaacggggactacccgtgc
aaccagtgtgacctgcgattttccagctttgatggtttccaggcccacctgaagtcgcac
ctggaaatgctgctgcggcgccagtcctgcccccagtgcagcaaggaggactttgaatcc
caggatgcattgcttcagcacctgacggtgcactacaccacaacatcaacccagtatgtg
tgcgagagctgcgataaacagttctcctccgtcgacgacctgcagaaacacctgctggac
atgcacacgtttgtgctctatcactgcacgctctgccaggaggtgtttgactccaaggtc
tccatacaggtgcatttggcagtgaagcacagcaacgagaagaagctgttccgctgcaca
gcctgtgcctgggacttcaggaaagaggcagatcttcagatccacgtcaagcataaccac
ctgggtcagaggtcaggcctcccgggggggctcggagcaggactcaaaccccgaaagtgc
atcttctgcggggagacgtttgggacagaggtggagctccagtgtcacatcaccacgcac
agcaagaagttcacgtgtcgcttctgcggcaaagctttccacgccatctccctgctagaa
agacacctgagggagaagcactgcatcttcgagggtggcaccatcaccggcaacggaggt
ggcacagggagcagcagcagccagaacgggacgcccaacggcctggcacagtcctccaag
cgaggaggtgcaggaggaggaggaggagtcagtggaggcaatggaggcgcagtaggtgtt
gagagaggaacggtggtggctgcagaacaagccgacctgcagaacatggtgctaaagagt
ggaggaactacccagggaggagatacggtgaacagccacgaggcgagcgggggcgaggag
gagctggacaactcagagcccatgtacgcctgtgacatctgcggagcggcgtacacaatg
gagtccctcctgcagaaccaccggctgcgtgaccacaacatccgaccgggagacgacgac
gccagttctcgaaagaagaaggcggacttcatcaaagggaaccacaagtgcaacgtgtgt
tccagaacgttcttctctgagagtggccttcgtgagcacgctcagacgcaccgcggcccc
gcaaaacactacatgtgcccgatctgtggcgagcgcttcccctccctgctgaccctcacc
gaacacaaggtgacccatagtaagagcctggacacaggaacctgtcgaatctgtaaaatg
cccctgcagagtgaggaggagtttatagagcattgccagatgcatcctgaccttcggaac
tccctcaccggcttccgctgtgtcgtctgcatgcagaccgtcacctccaccctggagctg
aagatccacggcaccttccacatgcagaagctttccagcggctctacgcttggaggagga
ggaggtggtggaaacgggacaggaggaggtggagcaggaataggagggaacggctcagcc
tcttcatcccctaacgggcacctgcagcagcataagttgtataaatgcgccttttgccta
aaggagttcaagaacaaaggggagctggtgaagctggatgtcaacggcctgccttatggc
ctctgtgcaggctgcatgaacaggggcacgaacggccagagtccgaaccagggaggagct
gccacgcccggggacatgcagggggagaaggccatggtcgggctgaggtgtccagagtgt
ggggtgaagtttgaaaccttggaagacctggagagtcacgtccagacagatcaccccgag
gtcagccccgaaaccagcgcaacaggaaagaaggccgaggcttcacccgtacctaagaaa
aagacgtatcagtgtattaaatgccaaatgacgttcgagacggagcgagagatccagatt
cacgtcgccaatcacatgatcgaagagcccacctgtcggcaagaggagggcatcaatcac
gagtgcaagctgtgtaaccagatgtttgactcacctgccaagctgctctgccacctgata
gagcacagcttcgaaggcatgggaggtaccttcaagtgtcccgtctgcttcacagtgttt
gtgcaggccaacaagctccagcagcacatttttgccgtccacggacaggaagacaaaatc
tacgactgttcccagtgtccgcagaagttcttcttccagacagaactacagaaccacaca
ctgagtcagcacgcgcagtga
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